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Lindert S, Stewart PL, Meiler J (2009)
Hybrid approaches: applying computational methods in cryo-electron microscopy.
Curr Opin Struct Biol 19:218-25
Dassa B, London N, Stoddard BL, Schueler-Furman O, Pietrokovski S (2009)
Fractured genes: a novel genomic arrangement involving new split inteins and a new homing endonuclease family.
Nucleic Acids Res 37:2560-73
Raveh B, Enosh A, Schueler-Furman O, Halperin D (2009)
Rapid sampling of molecular motions with prior information constraints.
PLoS Comput Biol 5:e1000295
Durham E, Dorr B, Woetzel N, Staritzbichler R, Meiler J (2009)
Solvent accessible surface area approximations for rapid and accurate protein structure prediction.
J Mol Model 15:1093-108
Fallen K, Banerjee S, Sheehan J, Addison D, Lewis LM, Meiler J, Denton JS (2009)
The Kir channel immunoglobulin domain is essential for Kir1.1 (ROMK) thermodynamic stability, trafficking and gating.
Channels (Austin) 3:57-68
Babor M, Kortemme T (2009)
Multi-constraint computational design suggests that native sequences of germline antibody H3 loops are nearly optimal for conformational flexibility.
Barth P, Wallner B, Baker D (2009)
Prediction of membrane protein structures with complex topologies using limited constraints.
Proc Natl Acad Sci U S A 106:1409-14
Sheffler W, Baker D (2009)
RosettaHoles: rapid assessment of protein core packing for structure prediction, refinement, design, and validation.
Protein Sci 18:229-39
Torres MP, Lee MJ, Ding F, Purbeck C, Kuhlman B, Dokholyan NV, Dohlman HG (2009)
G Protein Mono-ubiquitination by the Rsp5 Ubiquitin Ligase.
J Biol Chem 284:8940-50
Das R, Baker D (2009)
Prospects for de novo phasing with de novo protein models.
Acta Crystallogr D Biol Crystallogr 65:169-75