You are here
Pubs
-
Freedman TS, Sondermann H, Friedland GD, Kortemme T, Bar-Sagi D, Marqusee S, Kuriyan J (2006)
A Ras-induced conformational switch in the Ras activator Son of sevenless.
Proc Natl Acad Sci U S A 103:16692-7 -
Goobes G, Goobes R, Schueler-Furman O, Baker D, Stayton PS, Drobny GP (2006)
Folding of the C-terminal bacterial binding domain in statherin upon adsorption onto hydroxyapatite crystals.
Proc Natl Acad Sci U S A 103:16083-8 -
Bradley P, Baker D (2006)
Improved beta-protein structure prediction by multilevel optimization of nonlocal strand pairings and local backbone conformation.
Proteins 65:922-9 -
Johnston CA, Lobanova ES, Shavkunov AS, Low J, Ramer JK, Blaesius R, Fredericks Z, Willard FS, Kuhlman B, Arshavsky VY, Siderovski DP (2006)
Minimal determinants for binding activated G alpha from the structure of a G alpha(i1)-peptide dimer.
Biochemistry 45:11390-400 -
Meiler J, Baker D (2006)
ROSETTALIGAND: protein-small molecule docking with full side-chain flexibility.
Proteins 65:538-48 -
Chivian D, Baker D (2006)
Homology modeling using parametric alignment ensemble generation with consensus and energy-based model selection.
Nucleic Acids Res 34:e112 -
Dantas G, Watters AL, Lunde BM, Eletr ZM, Isern NG, Roseman T, Lipfert J, Doniach S, Tompa M, Kuhlman B, Stoddard BL, Varani G, Baker D (2006)
Mis-translation of a computationally designed protein yields an exceptionally stable homodimer: implications for protein engineering and evolution.
J Mol Biol 362:1004-24 -
Wang SX, Pandey KC, Somoza JR, Sijwali PS, Kortemme T, Brinen LS, Fletterick RJ, Rosenthal PJ, McKerrow JH (2006)
Structural basis for unique mechanisms of folding and hemoglobin binding by a malarial protease.
Proc Natl Acad Sci U S A 103:11503-8 -
Liu Y, Kuhlman B (2006)
RosettaDesign server for protein design.
Nucleic Acids Res 34:W235-8 -
Joachimiak LA, Kortemme T, Stoddard BL, Baker D (2006)
Computational design of a new hydrogen bond network and at least a 300-fold specificity switch at a protein-protein interface.
J Mol Biol 361:195-208