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Thompson MJ, Sievers SA, Karanicolas J, Ivanova MI, Baker D, Eisenberg D (2006)
The 3D profile method for identifying fibril-forming segments of proteins.
Proc Natl Acad Sci U S A 103:4074-8 -
Sivasubramanian A, Chao G, Pressler HM, Wittrup KD, Gray JJ (2006)
Structural model of the mAb 806-EGFR complex using computational docking followed by computational and experimental mutagenesis.
Structure 14:401-14 -
Baker D (2006)
Prediction and design of macromolecular structures and interactions.
Philos Trans R Soc Lond B Biol Sci 361:459-63 -
Arakaki T, Le Trong I, Phizicky E, Quartley E, DeTitta G, Luft J, Lauricella A, Anderson L, Kalyuzhniy O, Worthey E, Myler PJ, Kim D, Baker D, Hol WG, Merritt EA (2006)
Structure of Lmaj006129AAA, a hypothetical protein from Leishmania major.
Acta Crystallogr Sect F Struct Biol Cryst Commun 62:175-9 -
Sood VD, Baker D (2006)
Recapitulation and design of protein binding peptide structures and sequences.
J Mol Biol 357:917-27 -
Ambroggio XI, Kuhlman B (2006)
Computational design of a single amino acid sequence that can switch between two distinct protein folds.
J Am Chem Soc 128:1154-61 -
Schueler-Furman O, Glick E, Segovia J, Linial M (2006)
Is GAS1 a co-receptor for the GDNF family of ligands?
Trends Pharmacol Sci 27:72-7 -
Yarov-Yarovoy V, Schonbrun J, Baker D (2006)
Multipass membrane protein structure prediction using Rosetta.
Proteins 62:1010-25 -
Levy C, Lee YN, Nechushtan H, Schueler-Furman O, Sonnenblick A, Hacohen S, Razin E (2006)
Identifying a common molecular mechanism for inhibition of MITF and STAT3 by PIAS3.
Blood 107:2839-45 -
Song G, Lazar GA, Kortemme T, Shimaoka M, Desjarlais JR, Baker D, Springer TA (2006)
Rational design of intercellular adhesion molecule-1 (ICAM-1) variants for antagonizing integrin lymphocyte function-associated antigen-1-dependent adhesion.
J Biol Chem 281:5042-9