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Sircar A, Sanni KA, Shi J, Gray JJ (2011)
Analysis and modeling of the variable region of camelid single-domain antibodies.
J Immunol 186:6357-67 -
Song Y, Tyka M, Leaver-Fay A, Thompson J, Baker D (2011)
Structure-guided forcefield optimization.
Proteins 79:1898-909 -
Ganguly S, Weiner BE, Meiler J (2011)
Membrane protein structure determination using paramagnetic tags.
Structure 19:441-3 -
Yanover C, Bradley P (2011)
Large-scale characterization of peptide-MHC binding landscapes with structural simulations.
Proc Natl Acad Sci U S A 108:6981-6 -
Saha A, Lewis S, Kleiger G, Kuhlman B, Deshaies RJ (2011)
Essential role for ubiquitin-ubiquitin-conjugating enzyme interaction in ubiquitin discharge from Cdc34 to substrate.
Mol Cell 42:75-83 -
Sgourakis NG, Lange OF, DiMaio F, André I, Fitzkee NC, Rossi P, Montelione GT, Bax A, Baker D (2011)
Determination of the structures of symmetric protein oligomers from NMR chemical shifts and residual dipolar couplings.
J Am Chem Soc 133:6288-98 -
Babor M, Mandell DJ, Kortemme T (2011)
Assessment of flexible backbone protein design methods for sequence library prediction in the therapeutic antibody Herceptin-HER2 interface.
Protein Sci 20:1082-9 -
Karanicolas J, Corn JE, Chen I, Joachimiak LA, Dym O, Peck SH, Albeck S, Unger T, Hu W, Liu G, Delbecq S, Montelione GT, Spiegel CP, Liu DR, Baker D (2011)
A de novo protein binding pair by computational design and directed evolution.
Mol Cell 42:250-60 -
Fleishman SJ, Khare SD, Koga N, Baker D (2011)
Restricted sidechain plasticity in the structures of native proteins and complexes.
Protein Sci 20:753-7 -
Belitsky M, Avshalom H, Erental A, Yelin I, Kumar S, London N, Sperber M, Schueler-Furman O, Engelberg-Kulka H (2011)
The Escherichia coli extracellular death factor EDF induces the endoribonucleolytic activities of the toxins MazF and ChpBK.
Mol Cell 41:625-35