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Compilation

Help for a Beginner Needed! Installation on Win 8 Computer

Category: 
Compilation

Hi- Being very new to this, I've only had a chance to skim through the forums. I did have a few questions, though. As I'm new to using python and RC, I want to thank whomever for answering for their patience in helping me understand this.

Post Situation: 

external/dbio/sqlite3/sqlite3.c: Errors

Category: 
Compilation

Dear all, I keep having problems compiling Rosetta 3.5 on our university cluster. First, I edited site.settings so scons finds mpicc and mpicxx

import os

settings = {

"site" : {

"prepends" : {

"program_path" : os.environ["PATH"].split(":"),

"include_path" : os.environ["INCLUDE"].split(":"),

"library_path" : os.environ["LD_LIBRARY_PATH"].split(":"),

},

"appends" : {

},

Post Situation: 

system requirements (python and scons versions, etc) for Rosetta 2014.3x?

Category: 
Compilation

Hello,

I'm having trouble compiling rosetta 2014.34 on a red hat machine, and it looks like the problem may be with one or more missing features/attributes in one (or more) python modules. What versions of python (and I guess scons) are needed?

Thanks, - Mark

Post Situation: 

Install rosetta_2014.30.57114_bundle on ubuntu-14.04.1-desktop-amd64

Category: 
Compilation

Dear Sir or Madam,
I want to install rosetta_2014.30.57114_bundle on my Win 7 PC. After installing VMware Player and ubuntu-14.04.1-desktop-amd64, I tried to follow instructions on

https://www.rosettacommons.org/docs/latest/Build-Documentation.html#Comp...

After "Change directory to main/source" and "./scons.py -j1 bin", I was told:

Post Situation: 

compile pyrosetta under redhat 5.9 with g++ 4.1.2 and python 2.7.4

Category: 
Compilation

Hi,

the compilation was successful but when I run the TestBindings.py it always shows the following error.

rosetta-3.5/rosetta_source/src/python/bindings/rosetta/core/scoring/methods/__methods_all_at_once_.so: undefined symbol: _ZN4core7scoring7methods15PBLifetimeCache7set_pbpERKSsN7utility7pointer10owning_ptrINS0_25PoissonBoltzmannPotentialEEE

g++ version: 4.1.2 or 4.4.7 the same error.
python version 2.7.4
boost_version: 1.46 or 1.5.6

Post Situation: 

Building with "extra=graphics" on Linux?

Category: 
Compilation

I was trying to build Rosetta_2014.22.56873 with "extras=graphics" enabled on Debian linux 7.5

I get a number of errors related to narrowing conversions while building viewers.cc

Apparently "-Werror=narrowing" is set as a flag, and I was wondering what kind of trouble i would be getting my self in for if I just changed that flag and compiled it anyway.

I've attached a listing of the build and the errors received

Post Situation: 

rosetta_2014.22.56873: Unknown argument: '-finline-limit=20000'

Category: 
Compilation

I am trying to install rosetta_2014.22.56873 on an iMac [OSX 10.8.5; Darwin Ms-iMac.local 12.5.0 Darwin Kernel Version 12.5.0: Sun Sep 29 13:33:47 PDT 2013; root:xnu-2050.48.12~1/RELEASE_X86_64 x86_64] but the compilation failed with the following message:

Post Situation: 

Bug in the BuildBindings.py with Linux kernel version

Category: 
Compilation
PyRosetta

Hi,
I think I have found a rather minor bug. It happens only with Linux. I don't know if there is a report system for this, so I am posting it on the forum.
Thanks for your work with Rosetta, it is really amazing.
Cyril

Context:
I am building pyrosetta from source, using the BuildPyRosetta.sh generated by rosetta/tools/PyRosetta.develop/DeployPyRosetta.py.

Post Situation: 

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