Copying angles (pose.set_phi()) from a substructure with the same sequence to pose doesn't produce the exact same substructure?
Dear Rosetta Gurus,
I'm writing an extension to the Abinitio Protocol, the code I will be describing is called exactly after setup_fold() in AbrelaxApplication. Now let me describe the input and what I'm trying to do:
I use as input two poses, let's call them "model" and "prediction", both are sequencially identical.
"prediction" is the extended pose created in AbrelaxApplication::setup_fold(), "model" is a pose my class loads exterally from a pdb file of an idealized protein in a Centroid fashion.