You are here

RosettaCM rename or swap the order of sequences in your alignment file

5 posts / 0 new
Last post
RosettaCM rename or swap the order of sequences in your alignment file
#1

I want to do homology modelling with the below structures. First, I'm trying to create a threaded model according to the tutorial here https://www.rosettacommons.org/docs/latest/application_documentation/structure_prediction/RosettaCM. I'm recieving the below error and I would appreciate if someone helps me debug it. I also want to note that my structures have two chains, which is unlike the other multiple template tutorial here https://www.rosettacommons.org/demos/latest/tutorials/rosetta_cm/rosetta_cm_tutorial

The error:

[labusr@luxor scripts]$ /usr/bin/python /home/labusr/rosetta/tools/protein_tools/scripts/setup_RosettaCM.py --fasta /home/labusr/Ahmad/Rosetta/CM/5ucy.fasta --alignment /home/labusr/Ahmad/Rosetta/CM/alignment.clustal --alignment_format clustalw --templates /home/labusr/Ahmad/Rosetta/CM/1JFF.pdb --rosetta_bin $ROSETTA3/source/bin/ --verbose
Using rosetta from /home/labusr/rosetta/main//source/bin/
Switching to directory: /tmp/tmptpxMnK
['##', '1JFF:A|PDBID|CHAIN|SEQUENCE', '5UCY:_thread']
Traceback (most recent call last):
  File "/home/labusr/rosetta/tools/protein_tools/scripts/setup_RosettaCM.py", line 609, in <module>
    -> You may have to rename or swap the order of sequences in your alignment file."
AssertionError: 		The first sequence ID in a clustalw alignment file must match the fasta file name. 
 					   -> You may have to rename or swap the order of sequences in your alignment file.
[labusr@luxor scripts]$ 

 

The alignment file:

CLUSTAL O(1.2.4) multiple sequence alignment


5UCY:B|PDBID|CHAIN|SEQUENCE      MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGR
1JFF:B|PDBID|CHAIN|SEQUENCE      MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQ--LERINVYYNEAAGNK
5UCY:A|PDBID|CHAIN|SEQUENCE      MREVISIHVGQGGIQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK
1JFF:A|PDBID|CHAIN|SEQUENCE      MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
                                 *** : *: ** * *:*   **: . ****:* *   .*. :    : :*.::.*: ..:

5UCY:B|PDBID|CHAIN|SEQUENCE      YVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLD
1JFF:B|PDBID|CHAIN|SEQUENCE      YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD
5UCY:A|PDBID|CHAIN|SEQUENCE      HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
1JFF:A|PDBID|CHAIN|SEQUENCE      HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
                                 :****:::**** .:*.**:* : *:*:*:::: *: .*.**:*:**** * *::*  **

5UCY:B|PDBID|CHAIN|SEQUENCE      VVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDT
1JFF:B|PDBID|CHAIN|SEQUENCE      VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT
5UCY:A|PDBID|CHAIN|SEQUENCE      RIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
1JFF:A|PDBID|CHAIN|SEQUENCE      RIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
                                  :** :: *  **** : :*.*******: :**:.::  :* .:    *:: *:*:** :

5UCY:B|PDBID|CHAIN|SEQUENCE      VVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTC
1JFF:B|PDBID|CHAIN|SEQUENCE      VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT
5UCY:A|PDBID|CHAIN|SEQUENCE      VVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTA
1JFF:A|PDBID|CHAIN|SEQUENCE      VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
                                 ******: *:.*  :*::*    :****:**** *.*.:  *** :**:*:.  :*.:* 

5UCY:B|PDBID|CHAIN|SEQUENCE      CLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKN
1JFF:B|PDBID|CHAIN|SEQUENCE      CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKN
5UCY:A|PDBID|CHAIN|SEQUENCE      SLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPAN
1JFF:A|PDBID|CHAIN|SEQUENCE      SLRFDGALNVDLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
                                 .*** * ** *: :: .*::*:** ** :  :**: *  .  :. *:* *:*:  *:  *

5UCY:B|PDBID|CHAIN|SEQUENCE      MMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPP
1JFF:B|PDBID|CHAIN|SEQUENCE      MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP
5UCY:A|PDBID|CHAIN|SEQUENCE      MMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPP
1JFF:A|PDBID|CHAIN|SEQUENCE      QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPP
                                  *  .*****:*:: . ::** :  *:*:  : .::.*.:  **:* *...* .:   **

5UCY:B|PDBID|CHAIN|SEQUENCE      KG--------LKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTE
1JFF:B|PDBID|CHAIN|SEQUENCE      RG--------LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE
5UCY:A|PDBID|CHAIN|SEQUENCE      TVVPGGDLAKVMRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
1JFF:A|PDBID|CHAIN|SEQUENCE      TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
                                           :  :. ::.*:*** * : *: .:*  *: ::**:***.****:* **:*

5UCY:B|PDBID|CHAIN|SEQUENCE      AESNMNDLVSEYQQYQDAT----------------
1JFF:B|PDBID|CHAIN|SEQUENCE      AESNMNDLVSEYQQYQDATADEQGEFEEEGEEDEA
5UCY:A|PDBID|CHAIN|SEQUENCE      AREDLAALEKDYEEVGIETAE--------------
1JFF:A|PDBID|CHAIN|SEQUENCE      AREDMAALEKDYEEVGVDSVEGEGE--EEGEEY--

 

Thanks a ton. 

Post Situation: 
Fri, 2017-12-22 08:42
ahmadkhalifa

Attempting to debug this error, I tried to test the scripts in the tutorial with an example. Target: 1u19.fasta, template: 2rh1.pdb. I made the alignment into the grishin format manbually because setup_RosettaCM.py couldn't do it automatically. The alignment is:

## 1u19 2rh1.pdb
#
scores from program: 0
0 -------------------------------------PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF-GENHAIMGVAFTWVMA-LACAAPPLVGWSRYIP-EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESA----T-----------------------------------------------------------------------------------------------------------------------------------------------------TQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCG----------------------
0 DYKDDDAMGQPGNGSAFLLAPNRSHAPDHDVTQQRDEVWVVGMGIVMSLIVLAIVF-GNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEET---CCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVY-ILLNWIGYVNSGFNPLIYCRS-PDFRIAFQELLCLRRSSLKAYGNGYSSNGNTGEQSG

 

I entered the following for the threading, and it seemed to have run fine:

/usr/bin/python /home/labusr/rosetta/tools/protein_tools/scripts/setup_RosettaCM.py --fasta /home/labusr/Ahmad/Rosetta/CM/Test/1u19.fasta --alignment /home/labusr/Ahmad/Rosetta/CM/Test/alignment.grishin --alignment_format grishin --templates /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb --rosetta_bin $ROSETTA3/source/bin/ --verbose

 

For the hybridization, I used the XML provided in the tutorial, which gave an error. I had to convert it to the new XML format using rewrite_rosetta_script.py, this is the error I recieved:

 

[labusr@luxor scripts]$ $ROSETTA3/source/bin/rosetta_scripts.linuxgccrelease -in:file:fasta /home/labusr/Ahmad/Rosetta/CM/Test/1u19.fasta -parser:protocol /home/labusr/Ahmad/Rosetta/CM/Test/hybridize_new.xml -default_max_cycles 200 -dualspace -restore_talaris_behavior
core.init: Rosetta version rosetta.source.release-152:d6547f6858282e67c41356255dfdd63b0e7a75aa 2017-09-08 02:01:37.594540 from http://www.rosettacommons.org
core.init: command: /home/labusr/rosetta/main//source/bin/rosetta_scripts.linuxgccrelease -in:file:fasta /home/labusr/Ahmad/Rosetta/CM/Test/1u19.fasta -parser:protocol /home/labusr/Ahmad/Rosetta/CM/Test/hybridize_new.xml -default_max_cycles 200 -dualspace -restore_talaris_behavior
core.init: 'RNG device' seed mode, using '/dev/urandom', seed=-1227942856 seed_offset=0 real_seed=-1227942856
core.init.random: RandomGenerator:init: Normal mode, seed=-1227942856 RG_type=mt19937
core.init: Resolved executable path: /home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/rosetta_scripts.default.linuxgccrelease
core.init: Looking for database based on location of executable: /home/labusr/rosetta/main/database/
protocols.evaluation.ChiWellRmsdEvaluatorCreator: Evaluation Creator active ... 
core.chemical.GlobalResidueTypeSet: Finished initializing centroid residue type set.  Created 62 residue types
core.chemical.GlobalResidueTypeSet: Total time to initialize 0.02 seconds.
protocols.rosetta_scripts.RosettaScriptsParser: dock_design_filename=/home/labusr/Ahmad/Rosetta/CM/Test/hybridize_new.xml
protocols.rosetta_scripts.RosettaScriptsParser: Generating XML Schema for rosetta_scripts...
protocols.rosetta_scripts.RosettaScriptsParser: ...done
protocols.rosetta_scripts.RosettaScriptsParser: Initializing schema validator...
protocols.rosetta_scripts.RosettaScriptsParser: ...done
protocols.rosetta_scripts.RosettaScriptsParser: Validating input script...
protocols.rosetta_scripts.RosettaScriptsParser: ...done
protocols.rosetta_scripts.RosettaScriptsParser: Parsed script:
<ROSETTASCRIPTS>
	<SCOREFXNS>
		<ScoreFunction name="stage1" symmetric="0" weights="score3">
			<Reweight scoretype="atom_pair_constraint" weight="0.5"/>
		</ScoreFunction>
		<ScoreFunction name="stage2" symmetric="0" weights="score4_smooth_cart">
			<Reweight scoretype="atom_pair_constraint" weight="0.5"/>
		</ScoreFunction>
		<ScoreFunction name="fullatom" symmetric="0" weights="talaris2013_cart">
			<Reweight scoretype="atom_pair_constraint" weight="0.5"/>
		</ScoreFunction>
	</SCOREFXNS>
	<MOVERS>
		<Hybridize batch="1" fa_scorefxn="fullatom" name="hybridize" stage1_increase_cycles="1.0" stage1_scorefxn="stage1" stage2_increase_cycles="1.0" stage2_scorefxn="stage2">
			<Template cst_file="AUTO" pdb="/home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb" weight="1.000"/>
		</Hybridize>
		<FastRelax name="relax" scorefxn="talaris2013"/>
	</MOVERS>
	<PROTOCOLS>
		<Add mover="hybridize"/>
		<Add mover="relax"/>
	</PROTOCOLS>
	<OUTPUT scorefxn="talaris2013"/>
</ROSETTASCRIPTS>
core.scoring.ScoreFunctionFactory: SCOREFUNCTION: talaris2014.wts
core.scoring.etable: Starting energy table calculation
core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6)
core.scoring.etable: Finished calculating energy tables.
basic.io.database: Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv
basic.io.database: Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
core.scoring.etable: Using alternate parameters: LJ_RADIUS_SOFT in Etable construction.
core.scoring.etable: Starting energy table calculation
core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6)
core.scoring.etable: Finished calculating energy tables.
basic.io.database: Database file opened: scoring/score_functions/PairEPotential/pdb_pair_stats_fine
basic.io.database: Database file opened: scoring/score_functions/InterchainPotential/interchain_env_log.txt
basic.io.database: Database file opened: scoring/score_functions/InterchainPotential/interchain_pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: Database file opened: scoring/score_functions/SecondaryStructurePotential/phi.theta.36.HS.resmooth
basic.io.database: Database file opened: scoring/score_functions/SecondaryStructurePotential/phi.theta.36.SS.resmooth
protocols.jd2.parser.ScoreFunctionLoader: defined score function "stage1" with weights "score3"
protocols.jd2.parser.ScoreFunctionLoader:  setting stage1 weight atom_pair_constraint to 0.5
basic.io.database: Database file opened: scoring/score_functions/centroid_smooth/cen_smooth_params.txt
core.scoring.CartesianBondedEnergy: Initializing IdealParametersDatabase with default Ks=300 , 80 , 20 , 10 , 40
basic.io.database: Database file opened: scoring/score_functions/bondlength_bondangle_talaris//default-lengths.txt
core.scoring.CartesianBondedEnergy: Read 757 bb-independent lengths.
basic.io.database: Database file opened: scoring/score_functions/bondlength_bondangle_talaris//default-angles.txt
core.scoring.CartesianBondedEnergy: Read 1434 bb-independent angles.
basic.io.database: Database file opened: scoring/score_functions/bondlength_bondangle_talaris//default-torsions.txt
core.scoring.CartesianBondedEnergy: Read 1 bb-independent torsions.
basic.io.database: Database file opened: scoring/score_functions/bondlength_bondangle_talaris//default-improper.txt
core.scoring.CartesianBondedEnergy: Read 2251 bb-independent improper tors.
protocols.jd2.parser.ScoreFunctionLoader: defined score function "stage2" with weights "score4_smooth_cart"
protocols.jd2.parser.ScoreFunctionLoader:  setting stage2 weight atom_pair_constraint to 0.5
protocols.jd2.parser.ScoreFunctionLoader: defined score function "fullatom" with weights "talaris2013_cart"
protocols.jd2.parser.ScoreFunctionLoader:  setting fullatom weight atom_pair_constraint to 0.5
core.scoring.ScoreFunctionFactory: SCOREFUNCTION: talaris2014.wts
core.import_pose.import_pose: File '/home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb' automatically determined to be of type PDB
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 2 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 3 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 4 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 5 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 6 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 8 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 10 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 11 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 12 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 13 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 14 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 15 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 16 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 17 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 19 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 20 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 21 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 23 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 24 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 25 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 26 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 27 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 28 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 30 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 32 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 33 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 34 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 35 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 36 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 37 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 38 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 39 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 40 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 41 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 42 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 43 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 44 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 45 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 46 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 47 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 49 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 51 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 52 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 53 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 54 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 56 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 58 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 59 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 60 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 61 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 65 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  HIS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 66 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 67 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 68 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 69 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 70 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 71 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 72 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 73 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 75 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 76 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 77 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 78 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 79 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 80 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 81 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 82 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 83 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 84 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 85 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 86 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 87 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 88 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 89 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 90 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 92 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 93 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 94 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 95 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 96 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 97 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 98 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 99 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 101 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 102 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 103 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 104 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 105 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 107 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 108 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 109 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 110 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 111 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 112 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 113 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 114 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 115 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 116 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 117 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 118 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 119 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 120 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 121 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 123 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 124 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 125 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 126 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 127 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 128 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 129 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 130 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 131 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 132 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 133 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 135 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 136 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 137 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 138 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 139 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 140 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 141 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 142 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 143 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 144 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  HIS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 145 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 146 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 147 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 149 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 150 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  HIS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 151 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 152 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 154 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 155 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 156 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 157 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 159 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 160 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 161 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 162 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 163 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 164 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 165 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 166 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 167 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 168 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 169 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 171 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 173 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 175 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 176 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 177 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 178 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 179 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 180 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 181 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 182 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 183 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 184 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 185 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 186 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 187 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 188 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 189 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 190 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 191 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 192 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 193 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 194 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 195 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 196 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 197 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 199 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 200 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 201 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 202 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 203 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 204 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 205 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 206 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 207 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 208 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 209 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  HIS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 210 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 212 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 213 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 214 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 215 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 217 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 218 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 219 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 221 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 222 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 223 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 224 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 225 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 226 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 227 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 228 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 229 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 230 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 231 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 232 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 233 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 234 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 235 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 236 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  HIS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 237 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 238 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 239 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 240 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 241 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 242 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 243 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 244 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 245 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 246 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 247 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 248 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 249 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 250 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 251 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 252 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 253 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 254 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 256 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 257 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 258 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 259 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 261 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 262 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 263 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 264 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 265 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 266 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 267 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 268 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 269 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 270 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 271 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 272 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 273 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 274 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 276 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 277 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 278 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 279 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 280 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 281 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 282 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type:  LEU:CtermProteinFull
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASP:NtermProteinFull 1
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 2
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 3
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TRP 4
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 5
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 6
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 7
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue MET 8
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 9
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 10
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 11
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue MET 12
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 13
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 14
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 15
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 16
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 17
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 18
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 19
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 20
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 21
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 22
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 23
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 24
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 25
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 26
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 27
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 28
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 29
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 30
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 31
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 32
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 33
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 34
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ARG 35
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 36
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLN 37
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 38
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 39
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 40
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 41
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 42
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 43
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 44
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 45
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 46
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 47
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 48
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 49
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 50
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASP 51
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 52
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 53
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue MET 54
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 55
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 56
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 57
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 58
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 59
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PRO 60
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 61
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 62
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 63
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 64
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue HIS 65
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 66
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 67
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue MET 68
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 69
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue MET 70
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TRP 71
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 72
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 73
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 74
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 75
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 76
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TRP 77
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 78
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 79
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 80
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TRP 81
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 82
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 83
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 84
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASP 85
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 86
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 87
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 88
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 89
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 90
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 91
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 92
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 93
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 94
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 95
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 96
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 97
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 98
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 99
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 100
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 101
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASP 102
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ARG 103
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 104
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 105
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 106
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 107
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 108
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 109
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PRO 110
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 111
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 112
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 113
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLN 114
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 115
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 116
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 117
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 118
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 119
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 120
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 121
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 122
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ARG 123
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 124
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 125
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 126
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 127
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue MET 128
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 129
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TRP 130
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 131
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 132
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 133
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 134
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 135
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 136
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 137
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 138
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 139
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PRO 140
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 141
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLN 142
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue MET 143
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue HIS 144
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TRP 145
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 146
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ARG 147
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 148
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 149
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue HIS 150
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLN 151
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 152
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 153
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 154
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 155
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 156
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 157
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 158
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 159
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 160
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 161
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 162
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 163
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASP 164
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 165
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 166
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 167
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 168
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLN 169
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 170
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 171
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 172
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 173
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 174
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 175
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 176
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 177
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 178
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 179
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 180
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 181
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 182
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PRO 183
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 184
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 185
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 186
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue MET 187
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 188
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 189
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 190
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 191
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 192
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ARG 193
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 194
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 195
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLN 196
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 197
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 198
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 199
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ARG 200
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLN 201
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 202
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 203
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 204
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 205
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 206
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 207
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 208
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue HIS 209
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 210
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 211
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 212
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 213
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 214
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 215
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 216
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 217
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 218
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue MET 219
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 220
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 221
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 222
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue THR 223
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 224
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 225
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TRP 226
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 227
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PRO 228
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 229
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 230
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 231
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 232
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 233
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 234
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 235
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue HIS 236
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 237
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 238
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLN 239
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASP 240
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 241
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 242
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 243
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ARG 244
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LYS 245
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 246
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 247
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 248
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 249
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 250
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 251
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 252
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TRP 253
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 254
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 255
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 256
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue VAL 257
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 258
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 259
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLY 260
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 261
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASN 262
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PRO 263
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 264
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 265
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue TYR 266
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 267
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ARG 268
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue SER 269
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PRO 270
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ASP 271
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 272
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ARG 273
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ILE 274
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue ALA 275
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue PHE 276
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLN 277
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue GLU 278
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 279
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU 280
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue CYS 281
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CEN on residue LEU:CtermProteinFull 282
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 2 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 2 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 2 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 2 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 3 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 3 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom  CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom  CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom  CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom  CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom  NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 5 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 5 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 6 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 6 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 8 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 8 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 8 atom  SD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 10 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 10 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 10 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 11 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 11 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 12 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 12 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 12 atom  SD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 13 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 14 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 14 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 14 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 15 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 15 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 15 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 16 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 16 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 17 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 17 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 17 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 19 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 19 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 19 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 20 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 20 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 23 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 23 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 23 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 24 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 24 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 25 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 25 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 25 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 26 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 26 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 27 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 27 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 27 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 28 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 28 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 30 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 30 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 30 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 32 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 32 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 32 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 32 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 34 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 34 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 34 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 34 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom  NE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom  NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom  NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 36 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 36 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 36 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 37 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 37 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 37 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 37 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 38 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 38 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 39 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 39 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 40 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 40 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 41 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 41 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 41 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 44 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 44 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 44 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 45 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 45 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 46 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 47 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 47 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 47 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 49 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 51 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 51 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 51 atom  OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 52 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 52 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 52 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 53 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 53 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 54 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 54 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 54 atom  SD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 56 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 56 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 56 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 58 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 58 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 59 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 59 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 60 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 60 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 65 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 65 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 65 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 65 atom  ND1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 65 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 66 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 66 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 66 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 67 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 67 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 67 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 68 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 68 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 68 atom  SD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 69 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 69 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 69 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 69 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 70 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 70 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 70 atom  SD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom  CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom  CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom  CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom  CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom  NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 72 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 72 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 75 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 75 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 75 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom  CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom  CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom  CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom  CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom  NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 78 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 79 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 79 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 79 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 79 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom  CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom  CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom  CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom  CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom  NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 82 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 82 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 83 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 84 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 84 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 84 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 85 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 85 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 85 atom  OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 86 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 86 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 87 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 87 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 87 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 88 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 89 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 89 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 90 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 90 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 92 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 93 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 93 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 93 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 94 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 94 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 94 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 94 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 95 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 95 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 96 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 96 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 96 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 97 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 98 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 98 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 99 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 99 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 99 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 101 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 101 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 102 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 102 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 102 atom  OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom  NE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom  NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom  NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 107 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 107 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 107 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 108 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 108 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 109 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 110 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 110 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 112 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 112 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 112 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 112 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 114 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 114 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 114 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 114 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 115 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 116 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 116 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 116 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 117 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 117 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 117 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 118 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 118 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 119 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 119 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 119 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 119 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 120 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 120 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 120 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 121 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 121 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 121 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 121 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom  NE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom  NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom  NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 124 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 124 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 125 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 125 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 125 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 126 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 126 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 126 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 127 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 127 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 127 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 128 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 128 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 128 atom  SD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 129 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 129 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom  CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom  CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom  CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom  CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom  NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 131 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 131 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 131 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 132 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 132 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 133 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 135 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 135 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 135 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 136 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 136 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 137 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 139 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 139 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 139 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 140 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 140 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 141 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 141 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 141 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 142 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 142 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 142 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 142 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 143 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 143 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 143 atom  SD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 144 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 144 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 144 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 144 atom  ND1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 144 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom  CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom  CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom  CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom  CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom  NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom  NE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom  NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom  NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 149 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 149 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 150 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 150 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 150 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 150 atom  ND1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 150 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 151 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 151 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 151 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 151 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 152 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 152 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 152 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 152 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 154 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 154 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 154 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 155 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 155 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 155 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 156 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 159 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 159 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 159 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 159 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 160 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 160 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 160 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 160 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 161 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 161 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 162 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 163 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 164 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 164 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 164 atom  OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 167 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 167 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 168 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 168 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 168 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 169 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 169 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 169 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 169 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 173 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 173 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 173 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 175 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 176 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 177 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 177 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 177 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 178 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 178 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 179 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 182 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 182 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 183 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 183 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 184 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 184 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 184 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 185 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 185 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 186 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 186 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 186 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 187 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 187 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 187 atom  SD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 188 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 188 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 190 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 190 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 192 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom  NE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom  NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom  NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 194 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 194 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 196 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 196 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 196 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 196 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 197 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 197 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 197 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 197 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 199 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 199 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 199 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 199 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom  NE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom  NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom  NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 201 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 201 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 201 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 201 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 202 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 202 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 202 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 203 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 203 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 203 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 203 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 205 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 206 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 206 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 206 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 207 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 207 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 207 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 207 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 208 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 208 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 208 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 208 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 209 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 209 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 209 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 209 atom  ND1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 209 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 210 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 210 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 210 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 210 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 212 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 212 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 212 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 213 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 213 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 213 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 213 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 214 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 214 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 215 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 215 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 215 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 217 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 217 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 217 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 218 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 218 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 218 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 219 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 219 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 219 atom  SD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 221 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 221 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 223 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 223 atom  OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 224 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 224 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 224 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 225 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom  CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom  CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom  CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom  CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom  NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 227 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 227 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 227 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 228 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 228 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 231 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 231 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 231 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 232 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 232 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 233 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 233 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 233 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 234 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 234 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 234 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 235 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 235 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 236 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 236 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 236 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 236 atom  ND1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 236 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 237 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 237 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 238 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 238 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 238 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 239 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 239 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 239 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 239 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 240 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 240 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 240 atom  OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 241 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 241 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 241 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 242 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 242 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 242 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 243 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 243 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 243 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom  NE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom  NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom  NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 245 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 245 atom  CE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 245 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 245 atom  NZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 246 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 246 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 246 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 246 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 247 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 247 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 249 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 249 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 249 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 250 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 250 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 250 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 251 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 251 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 251 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 252 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 252 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 252 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom  CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom  CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom  CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom  CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom  NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 254 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 254 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 254 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 257 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 257 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 258 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 258 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 258 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 259 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 262 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 262 atom  ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 262 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 263 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 263 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 264 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 264 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 264 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 265 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 265 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 265 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom  OH  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 267 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom  NE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom  NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom  NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 269 atom  OG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 270 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 270 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 271 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 271 atom  OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 271 atom  OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom  NE  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom  NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom  NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 274 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 274 atom  CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 274 atom  CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom  CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom  CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom  CZ  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 277 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 277 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 277 atom  NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 277 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 278 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 278 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 278 atom  OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 278 atom  OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 279 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 279 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 279 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 280 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 280 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 280 atom  CG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 281 atom  SG  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 282 atom  CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 282 atom  CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 282 atom  CG  (trying to store temperature in PDBInfo)
protocols.hybridization.HybridizeProtocol: [ ERROR ] Sequence mismatch between input fasta and template /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb at residue 1
protocols.hybridization.HybridizeProtocol: [ ERROR ]    Expected: P   Saw: D
protocols.hybridization.HybridizeProtocol: [ ERROR ] THE PDB INFO IS NOT IN SYNC WITH THE FASTA. ATTEMPTING TO RESOLVE THE ISSUE AUTOMATICALLY
protocols.hybridization.HybridizeProtocol: score: 8300 identities: 95/319 gaps: 70/319
protocols.hybridization.HybridizeProtocol:               target       1 PWQFSMLAAYMFLLIMLGFPINFLTLYV-TVQHKKLR--TPLNYILLNLAVADLFM----VFGGFTTTLYTSLHGYFVFGPTGCNLEGFFAT----LGGEIALWSLVVLAIERYVVVCKPM---SNFRFGENHA---IMGVAFTW-VMALACAAPPLVGWSRYIP-EGMQCSCGIDYYTPHEETNNESFV-----IYMFVVHFIIPLIVIF-FCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT--HQGSDFGPIFMTIPAFFAKTSAVY---NPVIYIMMNKQFRNCMVTTLC
protocols.hybridization.HybridizeProtocol:             pose_seq       3 VWVVGMGIV-MSL-IVLA--IVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWT----FGNFWC--E--FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTK--NKARVIILMV---WIVSGLTSFLPIQMHWYRATHQEAINC------YA--EETCCDFFTNQAYAIASSIVSFYVPL-VIMVFVYSR-VFQ--EAKRQLKFCLKEHKALK--TLG-IIMGTFTL-CWLP-----FFIVNIVHVIQDNL-IRKEVYILLNWIGYVNSGFNPLIYCRSPD-FRIAFQELLC
protocols.hybridization.HybridizeProtocol: 
protocols.hybridization.HybridizeProtocol: [ ERROR ] WARNING! Realignment removed 33 residues!
protocols.hybridization.HybridizeProtocol: [ ERROR ] Sequence mismatch between input fasta and template /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb at residue 1
protocols.hybridization.HybridizeProtocol: [ ERROR ]    Expected: P   Saw: V

ERROR: Issue validating template in HybridizeProtocol.
ERROR:: Exit from: src/protocols/hybridization/HybridizeProtocol.cc line: 1008
BACKTRACE:
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libutility.so(utility::exit(std::string const&, int, std::string const&, int)+0x27f) [0x7f50705c148f]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols_b.5.so(protocols::hybridization::HybridizeProtocol::validate_template(std::string, std::string, std::shared_ptr<core::pose::Pose>, bool&)+0xcc9) [0x7f507ae272b9]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols_b.5.so(protocols::hybridization::HybridizeProtocol::parse_my_tag(std::shared_ptr<utility::tag::Tag const>, basic::datacache::DataMap&, std::map<std::string, std::shared_ptr<protocols::filters::Filter>, std::less<std::string>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::filters::Filter> > > > const&, std::map<std::string const, std::shared_ptr<protocols::moves::Mover>, std::less<std::string const>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::moves::Mover> > > > const&, core::pose::Pose const&)+0x24a5) [0x7f507ae297e5]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::moves::MoverFactory::newMover(std::shared_ptr<utility::tag::Tag const>, basic::datacache::DataMap&, std::map<std::string, std::shared_ptr<protocols::filters::Filter>, std::less<std::string>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::filters::Filter> > > > const&, std::map<std::string const, std::shared_ptr<protocols::moves::Mover>, std::less<std::string const>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::moves::Mover> > > > const&, core::pose::Pose const&)+0x7a) [0x7f50750bfafa]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::rosetta_scripts::RosettaScriptsParser::instantiate_mover(std::shared_ptr<utility::tag::Tag const> const&, basic::datacache::DataMap&, std::map<std::string, std::shared_ptr<protocols::filters::Filter>, std::less<std::string>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::filters::Filter> > > >&, std::map<std::string const, std::shared_ptr<protocols::moves::Mover>, std::less<std::string const>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::moves::Mover> > > >&, core::pose::Pose&)+0x15c) [0x7f50753cdbbc]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::rosetta_scripts::RosettaScriptsParser::generate_mover_for_protocol(core::pose::Pose&, bool&, std::shared_ptr<utility::tag::Tag const>, utility::options::OptionCollection const&, std::shared_ptr<protocols::rosetta_scripts::XmlObjects>)+0x2937) [0x7f50753d31e7]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::rosetta_scripts::RosettaScriptsParser::generate_mover_from_pose(core::pose::Pose&, std::shared_ptr<protocols::moves::Mover>&, bool, std::string const&, bool)+0xfc) [0x7f50753d75ac]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::jd2::JobDistributor::run_one_job(std::shared_ptr<protocols::moves::Mover>&, long, std::string&, std::string&, unsigned long&, unsigned long&, bool)+0x1194) [0x7f5075480b44]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::jd2::JobDistributor::go_main(std::shared_ptr<protocols::moves::Mover>)+0xc1) [0x7f5075481f71]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::jd2::FileSystemJobDistributor::go(std::shared_ptr<protocols::moves::Mover>)+0x4a) [0x7f50754596ba]
/home/labusr/rosetta/main//source/bin/rosetta_scripts.linuxgccrelease() [0x403408]
/lib64/libc.so.6(__libc_start_main+0xf5) [0x7f506e5b6c05]
/home/labusr/rosetta/main//source/bin/rosetta_scripts.linuxgccrelease() [0x403d4b]
Error: [ ERROR ] ERROR: Exception caught by JobDistributor while trying to get pose from job 'S_0001'
Error: [ ERROR ] 

[ ERROR ] EXCN_utility_exit has been thrown from: src/protocols/hybridization/HybridizeProtocol.cc line: 1008
ERROR: Issue validating template in HybridizeProtocol.


Error: [ ERROR ] Treating failure as bad input; canceling similar jobs
protocols.jd2.FileSystemJobDistributor: job failed, reporting bad input; other jobs of same input will be canceled: S_0001
protocols.jd2.JobDistributor: no more batches to process... 
protocols.jd2.JobDistributor: 1 jobs considered, 1 jobs attempted in 4 seconds
Error: [ ERROR ] Exception caught by rosetta_scripts application:1 jobs failed; check output for error messages
Error: [ ERROR ] 
[labusr@luxor scripts]$ 

 

Fri, 2017-12-22 13:00
ahmadkhalifa

I would appreciate any help with this. 

Tue, 2018-01-02 14:38
ahmadkhalifa

Any help would be appreciated. 

Mon, 2018-01-08 07:09
ahmadkhalifa

On the issue with setup_RosettaCM.py in your first post, you need to make sure you match the names of all the sequences you're using -- and this includes capitalization. "5UCY" is different from "5ucy". Another thing to keep in mind during the process is that Rosetta structure prediction pipelines like identifiers of 5-charachters (the four letter PDB code plus a chain identifier). They should be general, but they're not always. If you're having issues, try changing all your names to five-letter ones. (e.g. by padding four-letter or smaller ones with underscores.)

On your second issue, the key bit is the following

[ ERROR ] Sequence mismatch between input fasta and template /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb at residue 1
[ ERROR ]    Expected: P   Saw: V

If I had to guess, I'm guessing you're running things with the structures from before the threading, rather than with threaded structures. -- Once you're done with the threading step, you're done with the original templates (and the Grishin alignments) -- you should use the output of the threading step for the rosetta_scripts hybridization step.

If this is not the issue, then something happened with your threading step. When you're doing threading, be sure that the sequences you use match up exactly -- the template sequence in the Grishin alignment should match exactly to the sequences that's actually in the template PDB, and the target sequence should match exactly to the sequences which is in the fasta file. And the fasta file for threading should be identical to the fasta file that's used for the rosetta_scripts Hybridization stage.

 

 

Mon, 2018-01-15 15:25
rmoretti