I am docking an antibody that has 20 residues in the H3 loop. I realize that this is a very challenging case. From the 2017 paper by Weitzner and Gray, I understand the importance of a kink constraint in H3 loop modeling. I want to know if the H3 loop remodeling that occurs during snugdock includes the kink constraint. If not, I am concerned that the kink will be lost during remodeling, especially for this long loop.