Hi, I am trying to prepare a MPDocking run (v 2019.35).
Both prepacking as well as actual docking crash with the same message:
ERROR: The SpanningTopology object in MembraneInfo is empty!
ERROR:: Exit from: src/protocols/membrane/util.cc line: 1224
However, the attached log file seems to indicate that the molecule was read correctly. Also the TMspans were build and their center calculated (end of logfile).
Attachment | Size |
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prepack.log | 32.91 KB |
Category:
Post Situation:
To answer my own question, one docking partner was actually soluble (had no TM spans).
That means the actual question is, whether it is possible to dock a soluble to a TM protein?
This question is discussed here:
https://www.rosettacommons.org/node/10446