My name is Jong hui Hong
I'd like to rescore docking result structure made by Rosetta-script application with InterfaceAnalyzer
But InterfaceAnalyzer application binary couldn't be found in binary folder ( rosetta-source/main/source/bin) .
Is there any other folder for that application ?
It seems that InterfaceAnalyzer source is there in Rosetta source
Can there be something wrong with my rosetta installation?
Any kind of suggestion or answer would be appreciated
I should find it more carefully.
InterfaceAnalyzer binary was found int rosetta_soruce/main/source/bin/InterfaceAnalyzer.static.linuxgccrelease
With InterfaceAnalyzer, I want to rescore my docked conformer to get the interface_delta_X,
In result INTERFACE DELTA SASA was there. but it was SASA not energy like interface_delta_X
Can I get the interface_delta_X with InterfaceAnalyzer ?
If not, How can I calculate interface_delta_X with my docked_ conformer?
Really appreate for your help
When I rescore each complex conformer generated by Rosetta script based docking , I also use score_jd2 and total_score is also in the result.
But there is a huge difference between the total_score obtained by score_jd2( 282.232) and the total_score obtained after docking run(-888)
I tried my best to understand what's going insdie. But I could'nt
How can I reproduce the total_score value obtained after docking run?
Any kind of suggestion would be welcomed