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RoseTTaFold

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RoseTTaFold
#1

Hi,

Just a clarification about RoseTTaFold (https://github.com/RosettaCommons/RoseTTAFold):

Does it need pyRosetta in order to work properly?

I'm asking it becuase there are 2 diff. software licenses .

Thanks

Oz

Post Situation: 
Thu, 2021-10-07 05:27
ozsolomon

Hi Oz,

As described in the RoseTTAFold documentation, the package includes two piplines-
One using PyRosetta and one that doesn't.

For the pyrosetta version, user will get five final models having estimated CA rms error at the B-factor column (model/model_[1-5].crderr.pdb).
For the end-to-end version, there will be a single PDB output having estimated residue-wise CA-lddt at the B-factor column (t000_.e2e.pdb).

So the answer to your question depends on which pipline you are planning on using.

Thu, 2021-10-07 05:42
zivben

Thanks

Thu, 2021-10-07 14:25
ozsolomon