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CC (or similar) calculation for cryoEM fitting

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CC (or similar) calculation for cryoEM fitting
#1

Dear all,

I am building a model using a low-resolution (>15A) cryoEM map. How can I compute the CC (or similar) with Rosetta?

Thanks

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Tue, 2023-05-16 01:32
almeida85

The density score (e.g. elec_dens_fast) should correlate directly to the CC.

But if you want to calculate them more directly, the density_tools application should be able to give you that information. Alternatively, if you want to put it as part of a bigger RosettaScripts application, the ReportFSC mover should also be useful.

Tue, 2023-05-16 11:09
rmoretti

Thanks!

Tue, 2023-05-23 08:23
almeida85