I am trying to run minirosetta.linuxgccrelease on our cluster.
I got the following message at the end of the log file:
[ERROR] EXCN_utility_exit has been thrown from: src/core/fragment/FragmentIO.cc line: 233
ERROR: ERROR: FragmentIO: could not open file $HOME/Scratch/20141110_HC_minirosetta/input/aaC226S_HC09_05.200_v1_3
This problem seems to be Rosetta specific and not relate to the cluster. However, I do not think there is anything wrong with "aaC226S_HC09_05.200_v1_3" and it works fine on my Ubuntu.
The "test.sh" file attached is to submit the batch job on cluster.
The options file and output log file are also attached.
Could you please help me solve this? Thank you very much.