Hi all, I am facing an error, when reading in the silent output file after a docking simulation. Here I used 6 cores to create 2000 decoys each (sum 12000). See the flag file attached. I used a slightely modified version of the ligand docking application, which is provided in the ROSETTA examples.
Now, i tried to combine all six output files to compare the results. Actually, I tried it with the following command
[path to rosetta]/combine_silent.linuxgccrelease -in:file:silent sil1.out sil2.out sil3.out sil4.out sil5.out sil6.out -out:file:silent fda_dock.out -database [path to database]
with the corresponding paths to the executable and database. The file is read in, but the follwing error is prompted and the program is halted.
core.io.silent: Reading all structures from sil1.out
ERROR:: Exit from: src/core/sequence/AnnotatedSequence.cc line: 116
I also used another approach, because I didn't know, whether there are different silent file formats. Also, the same error occurs.
[path to rosetta]/score_jd2.linuxgccrelease -in:file:silent sil1.out -out:file:silent sil1_cor.out -out:file:silent_struct_type binary -database [path to database]
Do you have any suggestions, to resolve this.