You are here

fragment for polyAAA

2 posts / 0 new
Last post
fragment for polyAAA
#1

I am working on the Pyrosetta tutorial and I am trying to use protein fragments. Howevere there is a problem since the Robetta server keep on failing.
I am submitting this fasta file.

>poly_
AAAAAAAAAAAAAAAAAA

Is there anything wrong with my fasta format-

Knut J

Post Situation: 
Mon, 2010-11-29 08:23
knutjbj

A) Have you tried contacting the Robetta webmaster?

B) Can you post more details on what error message it gives?

I would guess either your sequence is too short, or it refuses to make fragments for a "test" sequence. The only realistic fragments would be helical anyway.

Thu, 2010-12-02 06:36
smlewis