I would like to use the weights membrane_highres_Menv_smooth.wts as it seems to be suitable for membrane proteins. Unfortunately I can’t find any further information, could anyone help me out? A paper or any other reference would be perfect.
I'm reasonably certain the author of the membrane code is Vladimir Yarov-Yarovoy. Here's one of the older papers on membranes and Rosetta: http://www.ncbi.nlm.nih.gov/pubmed/16372357
Thanks for the quick answer!
I found this paper before but I think the method there is for centroid structures. And according to the name “membrane_highres_Menv_smooth” should be for high resolution structures.
There are also these papers:
But unfortunately I can’t find out if and where “membrane_highres_Menv_smooth” is described.
If there is no other reference can I assume that it works similar to the references above?
I assume so, yes.