I've got a crystal structure and there is a loop region which contains 20 aa was missed. I am planning to fill in such loop by Rosetta. However, I found that there are three different methods for loop refinement in Roseeta:
Fragments Based Loop Modeling
Kinematic Loop Modeling
Do you have any idea which one is better for my case?I've complied Rosetta by command:
scons bin mode=release extra=mpi
I don't whether those refinement can be supported by mpi multiple thread.
Thank you very much