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Rosetta 3 - Applications
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ddg_monomer conformational search... by yperez » Wed, 2012-05-09 11:10 |
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5,050 |
by yperez Mon, 2014-04-21 06:47 |
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error with fragment_picker.linuxgccrelease by jiongzhang » Tue, 2012-04-17 09:07 |
3 |
3,606 |
by smlewis Mon, 2014-04-21 06:47 |
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Single Strand DNA (ssDNA) 3D structure prediction by mkoohim » Fri, 2012-04-06 00:52 |
4 |
14,655 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta 3.4 "Relax pdb with allatom constraints" does not work with structures containing multiple chains by ahonegger » Tue, 2012-04-24 01:34 |
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4,222 |
by ahonegger Mon, 2014-04-21 06:47 |
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ddg_monomer problem by deltag » Wed, 2012-04-04 07:53 |
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12,516 |
by smlewis Mon, 2014-04-21 06:47 |
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analysis of clustering by loris.moretti » Thu, 2012-04-19 02:52 |
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7,121 |
by rmoretti Mon, 2014-04-21 06:47 |
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Symmetry Docking and Clustering with Ligands by skovacs » Wed, 2012-03-07 16:46 |
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11,803 |
by Anonymous Mon, 2014-04-21 06:47 |
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how to run my openmp programe in rosetta3.3? by lihowe » Mon, 2012-02-27 23:43 |
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2,432 |
by smlewis Mon, 2014-04-21 06:47 |
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Residue_energy_breakdown utility by cn » Sat, 2012-03-17 06:11 |
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3,647 |
by cn Mon, 2014-04-21 06:47 |
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FloppyTail bugs for N-terminal tails by Dave C » Thu, 2012-03-01 13:06 |
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16,053 |
by bbarryabc Mon, 2014-04-21 06:47 |
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docking in rosetta 3.3 by Ammu » Thu, 2012-03-15 12:03 |
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6,130 |
by smlewis Mon, 2014-04-21 06:47 |
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ddG Monomer Low Res Protocol Convergence by harshkhare » Thu, 2012-03-01 00:45 |
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3,851 |
by harshkhare Mon, 2014-04-21 06:47 |
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Surface accessible residue as a constraint. by arthuc01 » Fri, 2012-03-09 23:27 |
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2,322 |
by smlewis Mon, 2014-04-21 06:47 |
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fragment_picker bug by David Hoover » Wed, 2012-02-29 11:43 |
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1,792 |
by David Hoover Mon, 2014-04-21 06:47 |
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pair energies across interface by irini » Fri, 2012-02-10 09:17 |
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5,064 |
by Anonymous Mon, 2014-04-21 06:47 |
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Generate fragment locally by deltag » Wed, 2012-02-01 06:26 |
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3,513 |
by deltag Mon, 2014-04-21 06:47 |
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Difference between relax and mimimize_with_cst by basvandenberg » Thu, 2012-02-09 00:16 |
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2,894 |
by rmoretti Mon, 2014-04-21 06:47 |
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loopmodel issue by chiendarret » Fri, 2012-01-27 00:51 |
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3,166 |
by smlewis Mon, 2014-04-21 06:47 |
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Does linker modeling exist? by aroop » Wed, 2012-02-22 07:34 |
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5,385 |
by smlewis Mon, 2014-04-21 06:47 |
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Relax a structure with >1 copy of a modified residue fails [Solved] by franfdez » Wed, 2012-02-08 00:47 |
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6,517 |
by franfdez Mon, 2014-04-21 06:47 |
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ab initio protein prediction using homologs by justin » Mon, 2012-02-13 07:52 |
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5,825 |
by justin Mon, 2014-04-21 06:47 |
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parameterizing new residues by chiendarret » Fri, 2012-02-03 22:59 |
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7,752 |
by rmoretti Mon, 2014-04-21 06:47 |
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How do you use two patches simulataneously with ab initio folding? by smiruthi » Wed, 2011-12-21 15:24 |
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5,450 |
by wangyr Mon, 2014-04-21 06:47 |
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limit_cluster_size default value by sacch » Thu, 2011-11-24 17:57 |
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2,961 |
by sacch Mon, 2014-04-21 06:47 |
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cluster.mpi running in MPI mode? by sacch » Fri, 2011-11-18 23:30 |
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4,479 |
by sacch Mon, 2014-04-21 06:47 |
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ddg with ligands by bhaines1 » Mon, 2011-12-05 14:32 |
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5,623 |
by rmoretti Mon, 2014-04-21 06:47 |
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Garbled Ligands from docking_protocol by skovacs » Tue, 2011-12-20 07:55 |
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19,489 |
by skovacs Mon, 2014-04-21 06:47 |
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Runnig Abinitio & score app by Gaurav_kumar » Wed, 2011-11-23 20:45 |
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11,772 |
by rmoretti Mon, 2014-04-21 06:47 |
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Run AbinitioRelax (rosetta 3.3) on cluster by grisha » Mon, 2011-12-12 14:20 |
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17,924 |
by grisha Mon, 2014-04-21 06:47 |
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loop modeling during enzyme design? by lzx32 » Wed, 2011-11-16 00:30 |
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6,070 |
by lzx32 Mon, 2014-04-21 06:47 |
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problems in InterfaceAnalyzer analysis by chenchaozhao » Fri, 2011-12-02 23:36 |
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8,789 |
by smlewis Mon, 2014-04-21 06:47 |
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ERROR: unrecognized residue name 'GLY_p:RepulsiveOnly' by smiruthi » Mon, 2011-12-12 14:27 |
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2,822 |
by rmoretti Mon, 2014-04-21 06:47 |
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Don't know how to extract scores from a RNA de novo silent file. by Basantab » Wed, 2011-11-23 17:27 |
10 |
10,105 |
by smlewis Mon, 2014-04-21 06:47 |
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RMS determination using Rosetta 3.3 by adraney » Thu, 2011-12-08 12:44 |
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3,374 |
by mark.wilson Mon, 2014-04-21 06:47 |
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proline patching problem by xun » Tue, 2012-01-03 11:15 |
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4,012 |
by xun Mon, 2014-04-21 06:47 |
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Representing Cross-linked nitrogens by jjlee2 » Sat, 2011-11-26 18:42 |
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2,499 |
by smlewis Mon, 2014-04-21 06:47 |
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rosetta scores for mutated structures by harshkhare » Wed, 2011-11-23 09:30 |
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2,864 |
by rmoretti Mon, 2014-04-21 06:47 |
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Idealize in Rosetta 3.3 by jadolfbr » Tue, 2011-12-06 11:59 |
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3,266 |
by jadolfbr Mon, 2014-04-21 06:47 |
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Pepspec - random runtime segfaults (rosetta 3.3 database replaced) [solved] by loreseeker » Wed, 2011-09-14 08:13 |
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3,689 |
by loreseeker Mon, 2014-04-21 06:47 |
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[SOLVED]core.io.silent: [ WARNING ] ... by fred » Wed, 2011-10-05 07:38 |
8 |
8,154 |
by fred Mon, 2014-04-21 06:47 |
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behind threading protocol by fred » Tue, 2011-10-25 05:37 |
0 |
2,254 |
by fred Mon, 2014-04-21 06:47 |
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Abrelax - Dunbrack02.lib.bin missing by omirus » Sun, 2011-09-18 06:30 |
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4,993 |
by smlewis Mon, 2014-04-21 06:47 |
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Standalone alanine scanning protocol by exchhattu » Thu, 2011-10-13 19:40 |
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5,474 |
by smlewis Mon, 2014-04-21 06:47 |
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Error while running "make_fragments.pl".....[blastpgp] ERROR: Arguments must start with '-' by AG88 » Thu, 2011-11-03 01:25 |
4 |
7,757 |
by weitzner Mon, 2014-04-21 06:47 |
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Fragments for long sequence by exchhattu » Tue, 2011-10-04 01:51 |
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3,280 |
by exchhattu Mon, 2014-04-21 06:47 |
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prepack_example.sh error message by sacch » Sun, 2011-10-23 23:22 |
2 |
3,349 |
by sacch Mon, 2014-04-21 06:47 |
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[SOLVED] swamped memory by fred » Fri, 2011-09-16 08:19 |
13 |
12,434 |
by fred Mon, 2014-04-21 06:47 |
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Enzyme design with variable CST blocks possible? by petrikigor » Thu, 2011-10-06 11:24 |
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7,280 |
by petrikigor Mon, 2014-04-21 06:47 |
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InterfaceAnalyzer -resfile by gw » Wed, 2011-11-02 16:01 |
1 |
2,938 |
by smlewis Mon, 2014-04-21 06:47 |
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AbinitioRelax Disulfide Bonds are not being retained by brspurri » Wed, 2011-09-28 13:55 |
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4,457 |
by parmef Mon, 2014-04-21 06:47 |
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Error while running Enzyme Design by saxen » Fri, 2011-10-21 15:46 |
11 |
11,142 |
by akpole Mon, 2014-04-21 06:47 |
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fragment_picker with fasta only by gw » Tue, 2011-11-15 13:20 |
3 |
4,467 |
by gw Mon, 2014-04-21 06:47 |
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RosettaRemodel by gw » Wed, 2011-09-14 13:24 |
2 |
3,673 |
by smlewis Mon, 2014-04-21 06:47 |
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ddg_monomer.mpi by gw » Thu, 2011-10-27 16:45 |
3 |
4,252 |
by smlewis Mon, 2014-04-21 06:47 |
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minimize_with_cst problems (ddg_monomer) by alexn » Tue, 2011-09-20 13:46 |
2 |
3,611 |
by alexn Mon, 2014-04-21 06:47 |
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Structure determination combining X-ray diffraction data and NMR chemical shift by MajorID » Mon, 2011-10-17 19:55 |
2 |
3,850 |
by rmoretti Mon, 2014-04-21 06:47 |
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Error with recognizing rotamer library atoms by oerbilgin » Fri, 2011-11-04 15:23 |
19 |
29,074 |
by oerbilgin Mon, 2014-04-21 06:47 |
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Fragment Files by nkemjika » Fri, 2011-07-22 15:11 |
1 |
3,114 |
by dgront Mon, 2014-04-21 06:47 |
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ERROR: no fragment to compute secondary structure by byin » Sun, 2011-08-07 23:55 |
3 |
4,583 |
by smlewis Mon, 2014-04-21 06:47 |
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Unable to run Rosetta LoopModeling application by BDBorrillo » Tue, 2011-07-19 14:06 |
2 |
5,503 |
by BDBorrillo Mon, 2014-04-21 06:47 |
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Compiling Rosetta 3.3 on Linux Mint by proteinproteindock » Thu, 2011-09-01 16:05 |
2 |
3,754 |
by proteinproteindock Mon, 2014-04-21 06:47 |
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relax with resfile by gw » Fri, 2011-08-05 10:57 |
3 |
6,232 |
by nannemdp Mon, 2014-04-21 06:47 |
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flexpepdock flag "-packing:unboundrot" by gw » Mon, 2011-07-11 12:23 |
2 |
4,120 |
by Ora Schueler-Furman Mon, 2014-04-21 06:47 |
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Problems with Ligand Docking by saxen » Fri, 2011-08-19 00:19 |
8 |
8,926 |
by glemmon Mon, 2014-04-21 06:47 |
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score_jd2.linuxgccrelease documentation by fglaser » Mon, 2011-08-01 04:08 |
1 |
4,091 |
by smlewis Mon, 2014-04-21 06:47 |
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How to define pi-pi stacking in cst file? by lzx32 » Mon, 2011-07-04 23:47 |
6 |
8,224 |
by lzx32 Mon, 2014-04-21 06:47 |
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partial ab initio modeling by fred » Wed, 2011-08-17 14:14 |
3 |
4,247 |
by smlewis Mon, 2014-04-21 06:47 |
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protein structure prediction using relax -- high-powered jobs by rfieldhouse » Mon, 2011-05-30 18:29 |
7 |
7,807 |
by dimaio Mon, 2014-04-21 06:47 |
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score to use for picking top docking solutions? by sudhar » Tue, 2011-06-14 06:47 |
3 |
5,954 |
by weitzner Mon, 2014-04-21 06:47 |
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Floppytail modelling by felipet » Fri, 2011-06-24 09:23 |
2 |
3,802 |
by felipet Mon, 2014-04-21 06:47 |
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cluster,how to get the statistic data by MajorID » Wed, 2011-06-08 09:20 |
0 |
1,990 |
by MajorID Mon, 2014-04-21 06:47 |
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Ligand docking and protein design of an internal pocket in a protein with a cofactor by oerbilgin » Mon, 2011-06-20 13:55 |
2 |
4,860 |
by frichter Mon, 2014-04-21 06:47 |
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FlexPepDocking with GDP-bound protein by LI » Sun, 2011-06-12 20:02 |
3 |
4,793 |
by rmoretti Mon, 2014-04-21 06:47 |
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rosetta protein protein docking start up by vk » Fri, 2011-06-24 09:01 |
5 |
7,113 |
by smlewis Mon, 2014-04-21 06:47 |
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How to add constrains to FlexPepDocking? by MajorID » Thu, 2011-06-02 11:00 |
2 |
3,318 |
by MajorID Mon, 2014-04-21 06:47 |
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cluster error by sudhar » Fri, 2011-06-17 05:58 |
1 |
3,016 |
by rmoretti Mon, 2014-04-21 06:47 |
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Missing common atom definitions in constraints by ic3reyes » Sat, 2011-06-11 13:09 |
3 |
5,173 |
by smlewis Mon, 2014-04-21 06:47 |
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Modeling of side-chains onto membrane ab initio cluster? by akfried » Thu, 2011-06-23 04:03 |
3 |
4,094 |
by nkemjika Mon, 2014-04-21 06:47 |
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flexpep docking problem-----How to do with phosphorylation peptide? by MajorID » Thu, 2011-06-02 00:37 |
4 |
6,365 |
by rmoretti Mon, 2014-04-21 06:47 |
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Why do non proten ligands get a very high score in kinematic loop modeling/ in general? by a_s_a » Wed, 2011-06-15 00:03 |
8 |
8,035 |
by a_s_a Mon, 2014-04-21 06:47 |
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Molecular Replacement with multiple chains by brspurri » Fri, 2011-06-10 08:25 |
0 |
2,182 |
by brspurri Mon, 2014-04-21 06:47 |
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DNA Interface design by zadie1118 » Wed, 2011-06-22 07:05 |
0 |
2,189 |
by zadie1118 Mon, 2014-04-21 06:47 |
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Problem readin .ccp4 map file by jljbbc » Tue, 2011-05-03 11:29 |
4 |
5,820 |
by jljbbc Mon, 2014-04-21 06:47 |
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Rosetta-Holes Scoring Function by kroberts » Fri, 2011-05-13 14:05 |
11 |
14,938 |
by rmoretti Mon, 2014-04-21 06:47 |
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Problem with symmetric docking by saxen » Fri, 2011-04-29 15:15 |
3 |
4,170 |
by smlewis Mon, 2014-04-21 06:47 |
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kinematic loop modeling multiple input: possible? by a_s_a » Thu, 2011-05-12 09:33 |
2 |
3,377 |
by a_s_a Mon, 2014-04-21 06:47 |
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Using Rosetta Docking for nucleic acids by Adrien Guilhot » Thu, 2011-04-28 06:16 |
3 |
5,168 |
by Adrien Guilhot Mon, 2014-04-21 06:47 |
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ab inito memberane(error in alignblast.pl) by kingljy » Tue, 2011-05-03 23:41 |
6 |
7,182 |
by karthishanmugam Mon, 2014-04-21 06:47 |
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Help with enzyme design by lzx32 » Fri, 2011-04-08 22:29 |
6 |
6,613 |
by lzx32 Mon, 2014-04-21 06:47 |
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flexpep docking, select the decoy to do the further docking, questions by michael_luntan » Fri, 2011-04-22 04:43 |
2 |
3,558 |
by michael_luntan Mon, 2014-04-21 06:47 |
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problem when exact pdb from silent file by wenchangyu2008 » Mon, 2011-04-18 00:42 |
1 |
3,199 |
by wenchangyu2008 Mon, 2014-04-21 06:47 |
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placing a constraint during structure prediction by cbala » Thu, 2011-04-07 08:54 |
1 |
3,234 |
by ic3reyes Mon, 2014-04-21 06:47 |
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Destination of score.fsc file by anirbanzz » Wed, 2011-04-20 23:30 |
1 |
2,877 |
by smlewis Mon, 2014-04-21 06:47 |
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Dimer of dimers by smiruthi » Fri, 2011-04-15 10:41 |
4 |
7,138 |
by IAndre Mon, 2014-04-21 06:47 |
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membrane ab-initio modeling, is the quality comparable to comparative modeling of 20% id template? by fglaser » Thu, 2011-04-07 07:57 |
0 |
2,285 |
by fglaser Mon, 2014-04-21 06:47 |
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flexpep docking problem by michael_luntan » Mon, 2011-04-18 17:15 |
5 |
5,763 |
by michael_luntan Mon, 2014-04-21 06:47 |
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rna structure prediction by cbala » Thu, 2011-04-14 07:42 |
5 |
5,952 |
by mkoohim Mon, 2014-04-21 06:47 |
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protein-protein docking by cbala » Mon, 2011-04-18 09:15 |
1 |
2,663 |
by smlewis Mon, 2014-04-21 06:47 |
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RosettaAntibody by mpendleton » Mon, 2011-04-04 10:27 |
3 |
5,053 |
by jianqing Mon, 2014-04-21 06:47 |
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some application troubles when using resfile flag by chenchaozhao » Tue, 2011-04-05 00:05 |
24 |
26,986 |
by smlewis Mon, 2014-04-21 06:47 |
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