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Rosetta 3 - Applications
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score application by Hongtham » Tue, 2014-12-23 06:38 |
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1,405 |
by rmoretti Fri, 2015-01-02 11:06 |
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Resfile as a input for InterfaceAnalyzer by palak8669 » Sun, 2015-06-07 21:46 |
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1,406 |
by smlewis Mon, 2015-06-08 06:35 |
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How to make new VALL database? by Danielsebas » Sun, 2019-09-08 02:16 |
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1,406 |
by Danielsebas Wed, 2019-09-11 00:44 |
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CartesianRefiner compilation problem by DmitriiN » Tue, 2015-12-15 08:52 |
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1,407 |
by rmoretti Tue, 2015-12-15 09:48 |
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How to choose designed antibody by Sunyp_IM » Wed, 2020-06-24 10:06 |
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1,411 |
by jadolfbr Fri, 2020-07-24 07:24 |
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running structure prediction with robetta server like automation by dhirajks » Mon, 2018-01-29 21:32 |
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1,417 |
by rmoretti Tue, 2018-01-30 07:51 |
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RosettaLigand Docking by Dinesh Kumar » Mon, 2018-01-15 20:54 |
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1,426 |
by rmoretti Tue, 2018-01-16 07:24 |
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ERROR: Specified chain does not exist. by ajaniharesh » Fri, 2019-04-05 11:14 |
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1,427 |
by ajaniharesh Tue, 2019-04-09 06:53 |
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Abinitio error: std::out_of_range: basic_string by Harley Worthy » Tue, 2017-10-31 15:20 |
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1,442 |
by Harley Worthy Thu, 2017-11-02 08:53 |
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Rosetta_cm Segmentation Fault by gszwabowski » Thu, 2019-06-20 12:55 |
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1,449 |
by gszwabowski Wed, 2019-06-26 10:25 |
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problems with generating the params file by dyu » Thu, 2017-09-28 13:34 |
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1,452 |
by dyu Thu, 2017-09-28 18:54 |
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error--rosetta fragment‐based refinement protocol for refinement against EM density by gsuchunli » Wed, 2016-07-06 10:35 |
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1,461 |
by rmoretti Tue, 2016-07-12 08:56 |
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SPLINE EPR_DISTANCE Constraint Error by mmw88 » Tue, 2018-09-18 14:39 |
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1,461 |
by rmoretti Thu, 2018-09-20 09:19 |
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how to generate Fragments using up to 2001 structures only by oppopomoz » Sat, 2015-07-25 00:43 |
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1,466 |
by rmoretti Thu, 2015-08-06 08:57 |
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Folding and Docking using Symmetry by danielles » Wed, 2012-09-12 11:32 |
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1,474 |
by danielles Mon, 2014-04-21 06:47 |
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Is it possible to restart the ddg_monomer.linuxgccrelease? by lanselibai » Mon, 2015-09-07 03:46 |
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1,476 |
by rmoretti Wed, 2015-09-09 12:01 |
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Problem in using "loopmodel" application to add missing residues by sushreet » Wed, 2014-08-27 12:43 |
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1,479 |
by rmoretti Thu, 2014-08-28 09:42 |
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Rna Denovo by helderveras » Wed, 2020-05-06 08:40 |
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1,480 |
by everyday847 Wed, 2020-05-20 08:52 |
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Homology modelling applies alignment wrong by bernhardcl » Thu, 2015-08-06 09:39 |
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1,483 |
by bernhardcl Tue, 2015-08-11 09:11 |
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why is talaris2014 scoring fuction not used with ligand docking? by banshee » Fri, 2016-09-09 01:19 |
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1,493 |
by rmoretti Fri, 2016-09-09 07:47 |
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Enzyme Design - Score File by nwhoppe » Thu, 2016-04-07 15:11 |
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1,493 |
by rmoretti Fri, 2016-04-08 07:39 |
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Problem with mpirun/mpiexec by ahansel » Fri, 2020-07-10 08:37 |
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1,498 |
by rmoretti Fri, 2020-07-10 09:59 |
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error extracting PDB from silent from AbinitioRelax with constraints by attesor » Wed, 2017-06-14 04:15 |
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1,499 |
by smlewis Fri, 2017-06-16 07:35 |
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Instructing design scripts to use noncanonical AA instead of canonical by zcrook » Tue, 2014-11-25 10:43 |
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1,502 |
by rmoretti Wed, 2014-11-26 07:51 |
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Rosetta Script for ddg_monomer protocol 16 by cossio » Thu, 2018-01-25 08:23 |
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1,509 |
by cossio Sun, 2018-03-11 09:12 |
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Ligand Docking with ARLS by cam11 » Thu, 2016-06-23 09:34 |
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1,510 |
by rmoretti Thu, 2016-06-23 10:55 |
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Unable to understand fragment picking tutorial points. by Danielsebas » Thu, 2019-09-05 03:44 |
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1,511 |
by danpf Fri, 2019-09-06 11:29 |
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Modeling the structure of camel single domain antibody by Sunyp_IM » Mon, 2018-01-08 00:34 |
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1,513 |
by Sunyp_IM Mon, 2018-01-08 00:55 |
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Model truncated proteins by BuddySphinx » Wed, 2018-12-12 10:32 |
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1,516 |
by smlewis Wed, 2018-12-12 16:51 |
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Relax both peptide and ligands by matteoferla » Thu, 2018-09-13 03:11 |
3 |
1,520 |
by smlewis Fri, 2018-09-14 10:34 |
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RosettaMatch outputs by mwfranklin » Tue, 2016-10-11 11:46 |
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1,523 |
by rmoretti Fri, 2016-10-14 08:56 |
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Fastrelax problem by Pernille » Tue, 2014-06-17 08:59 |
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1,527 |
by Pernille Fri, 2014-06-20 00:17 |
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autoNOE peak lists by aep » Thu, 2015-08-06 06:15 |
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1,527 |
by sgourn Tue, 2015-08-18 18:25 |
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Should I trust the score output from relax used with a protein complex? by cossio » Thu, 2015-05-07 06:08 |
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1,528 |
by rmoretti Mon, 2015-05-25 12:37 |
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ddg_monomer with -ddg::local_opt_only true, will it affect other chains that are close? by cossio » Fri, 2014-12-26 13:11 |
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1,530 |
by rmoretti Tue, 2015-01-13 07:44 |
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Symmetry-aware Backrub? by gamacy » Fri, 2014-11-14 02:18 |
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1,530 |
by rmoretti Tue, 2014-11-18 09:10 |
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How to concatenate the 3-mer and 9-mer files for RosettaCM? by lanselibai » Fri, 2020-05-08 05:38 |
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1,531 |
by danpf Tue, 2020-05-12 10:58 |
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Difference between movemap and -pivot_residues by aloshbau » Wed, 2016-02-24 13:21 |
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1,531 |
by rmoretti Wed, 2016-02-24 14:39 |
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how to find help informations on rosetta_scripts in rosetta3.10 by xinmiaohe » Mon, 2019-08-26 14:48 |
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1,533 |
by xinmiaohe Tue, 2019-08-27 08:37 |
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The problems on pdb renumbering by Sunyp_IM » Sun, 2017-08-20 06:39 |
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1,536 |
by Sunyp_IM Sun, 2017-08-20 06:39 |
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Error with the mpi version of simple_cycpep_predict by Florent Langenfeld » Wed, 2020-02-05 05:16 |
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1,543 |
by vmulligan Fri, 2020-04-10 02:54 |
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Antibody Modelling by luicui » Mon, 2017-01-23 21:30 |
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1,543 |
by smlewis Mon, 2017-02-06 20:46 |
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cluster,how to get the statistic data by MajorID » Wed, 2011-06-08 09:20 |
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1,546 |
by MajorID Mon, 2014-04-21 06:47 |
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Translate mover chain X doesnot exist. by surya » Thu, 2020-07-09 08:36 |
6 |
1,549 |
by rmoretti Tue, 2020-07-14 10:54 |
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problem with modelling of protein (140 and 150 residues respectively) by krlitros87 » Wed, 2014-10-22 09:39 |
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1,554 |
by rmoretti Thu, 2014-10-23 13:55 |
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relax job failed by albumns » Sat, 2014-07-26 00:21 |
1 |
1,557 |
by rmoretti Sun, 2014-07-27 10:48 |
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RosettaAntibody core.pose.util error by rishibedi » Fri, 2018-10-05 01:31 |
2 |
1,564 |
by esozdemir Thu, 2019-06-13 12:19 |
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Docking with loop rebuilding by kxiao » Sun, 2015-06-28 19:37 |
1 |
1,564 |
by rmoretti Fri, 2015-07-03 14:41 |
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Failed glycine check when running RosettaRemodel to build disulfide by cheyuk » Fri, 2014-06-27 02:31 |
1 |
1,577 |
by everyday847 Sun, 2014-09-28 21:16 |
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Interface Analyzer Segmentation Fault by h_trasatti » Tue, 2017-02-21 12:48 |
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1,582 |
by smlewis Tue, 2017-02-21 14:10 |
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RosettaDesign error with Option file open failed by xingqing326 » Sun, 2020-04-19 01:56 |
4 |
1,584 |
by xingqing326 Tue, 2020-04-21 19:11 |
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Remodel with residue constraints by sn » Fri, 2017-03-10 01:40 |
2 |
1,585 |
by rmoretti Mon, 2017-03-13 08:01 |
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RosettaMatch and CST files by mwfranklin » Mon, 2016-07-25 11:49 |
0 |
1,593 |
by mwfranklin Mon, 2016-07-25 11:49 |
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Fixing part of a ligand in dock-design by hssnzdh2 » Mon, 2015-11-23 17:14 |
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1,594 |
by rmoretti Tue, 2015-11-24 16:16 |
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Including ab-initio predicted model in fragment library generation by ashu4487 » Thu, 2016-12-08 17:49 |
2 |
1,598 |
by ashu4487 Sun, 2016-12-11 19:03 |
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Ddg_monomer: implementing disulfides by kabol » Wed, 2016-11-30 02:39 |
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1,603 |
by rmoretti Wed, 2016-11-30 07:46 |
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Negative Design by rbjacob » Thu, 2018-10-11 09:18 |
3 |
1,610 |
by smlewis Mon, 2018-10-15 08:42 |
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Rosetta ab initio run gives 0.00 RMSD for generated 2000 models? (run still in progress) by Danielsebas » Mon, 2019-09-23 03:24 |
5 |
1,612 |
by smlewis Mon, 2019-09-23 11:42 |
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Script for loop modeling: how to define loop sequence by batch2k » Thu, 2014-10-30 12:58 |
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1,613 |
by jadolfbr Fri, 2014-10-31 08:45 |
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Loop modeling: KIC with fragments producing unusual models by kamau » Mon, 2015-06-01 12:06 |
1 |
1,613 |
by rmoretti Sat, 2015-06-20 20:07 |
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JD2 MPI by jrcf » Wed, 2015-10-28 14:45 |
1 |
1,618 |
by rmoretti Sat, 2015-10-31 08:57 |
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How to specify only design surface residues and loops by RosettaScripts? by johnnytam100 » Sun, 2019-04-07 21:47 |
4 |
1,622 |
by johnnytam100 Wed, 2019-04-10 02:48 |
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-loops:fa_input not found in command line top-level context by swarekwood » Thu, 2017-08-24 03:15 |
2 |
1,622 |
by swarekwood Fri, 2017-08-25 05:08 |
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Error in Loop modeling and other queries by ashu4487 » Wed, 2016-05-11 18:23 |
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1,622 |
by rmoretti Fri, 2016-06-17 10:15 |
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How to restart RASREC run by aep » Fri, 2016-07-01 04:39 |
2 |
1,627 |
by aep Fri, 2016-07-01 06:54 |
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comparative modeling of a homodimer by banshee » Mon, 2017-01-09 18:34 |
1 |
1,638 |
by rmoretti Wed, 2017-01-11 13:00 |
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Creating model of 89-90 residues by ab initio methodology-help by krlitros87 » Sun, 2014-05-25 12:12 |
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1,638 |
by rmoretti Mon, 2014-05-26 09:29 |
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Problem in redesign binding site by armart999 » Fri, 2016-10-14 01:55 |
1 |
1,646 |
by rmoretti Fri, 2016-10-14 08:42 |
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Loopmodel with DNA has no energy score by Nicky_Learning_... » Sun, 2015-05-10 19:31 |
1 |
1,646 |
by rmoretti Mon, 2015-05-25 12:30 |
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ddg_monomer "ERROR: seqpos >= 1" by cossio » Fri, 2015-10-02 12:20 |
1 |
1,652 |
by rmoretti Fri, 2015-10-02 12:30 |
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How to scan double mutations in RosettaScripts? by msardejani » Mon, 2016-12-12 16:52 |
2 |
1,664 |
by msardejani Mon, 2016-12-12 17:48 |
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Adding 'virtual' residues for N- and C-terminal optimisation by Derek Smith » Thu, 2014-08-14 23:18 |
1 |
1,683 |
by jadolfbr Fri, 2014-10-31 09:00 |
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Behavior of nstruct by johnnytam100 » Wed, 2019-05-15 22:22 |
3 |
1,685 |
by johnnytam100 Tue, 2019-05-21 20:48 |
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Output structures from docking_prepack_protocol: initial__*.pdb vs prepack__*.pdb, which one should I send to docking_protocol? by cossio » Thu, 2015-02-05 07:10 |
1 |
1,689 |
by rmoretti Mon, 2015-02-09 12:33 |
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cryptic error "Got some signal... It is:15" -- an issue with 'fixbb', or something else? by dantimatter » Wed, 2019-10-16 14:59 |
5 |
1,691 |
by dantimatter Wed, 2019-10-30 09:43 |
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FloppyTail vs. Remodel for linkers by attesor » Mon, 2014-07-07 08:36 |
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1,696 |
by smlewis Mon, 2014-07-07 11:58 |
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Surface accessible residue as a constraint. by arthuc01 » Fri, 2012-03-09 23:27 |
1 |
1,709 |
by smlewis Mon, 2014-04-21 06:47 |
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Warnings during relax by cossio » Thu, 2018-10-11 14:42 |
2 |
1,714 |
by rmoretti Mon, 2019-11-04 13:56 |
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Getting error with Rosetta "antibody.linuxgccrelease" command by Sunyp_IM » Mon, 2017-08-07 19:40 |
1 |
1,718 |
by smlewis Tue, 2017-08-15 23:19 |
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cluster.linuxgccrelease Killed error by samuelrpita » Fri, 2015-11-20 05:56 |
1 |
1,720 |
by rmoretti Tue, 2015-11-24 16:07 |
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how to pick fragments for a transmembrane protein by tevang » Mon, 2012-05-28 06:52 |
1 |
1,722 |
by tevang Mon, 2014-04-21 06:47 |
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Collecting all decoys from batch files by aep » Sun, 2016-08-07 12:23 |
2 |
1,724 |
by aep Sat, 2016-08-13 13:03 |
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Regarding the efficiency of the new low resolution ligand-docking movement “Transform”. by Martin Floor » Mon, 2017-05-15 09:19 |
2 |
1,727 |
by Martin Floor Mon, 2017-05-15 11:13 |
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Antibody Docking application by Maryam_tabasinezhad » Sat, 2015-09-05 09:58 |
1 |
1,734 |
by jadolfbr Wed, 2015-09-09 12:35 |
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DNA Interface design by zadie1118 » Wed, 2011-06-22 07:05 |
0 |
1,745 |
by zadie1118 Mon, 2014-04-21 06:47 |
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RosettaMP: issue with generating .lips4 file by ksy141 » Mon, 2019-01-21 17:17 |
5 |
1,756 |
by noahC_noahDo Fri, 2020-11-20 11:29 |
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Molecular Replacement with multiple chains by brspurri » Fri, 2011-06-10 08:25 |
0 |
1,764 |
by brspurri Mon, 2014-04-21 06:47 |
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error--rosetta fragment‐based refinement protocol for refinement against EM density by gsuchunli » Mon, 2016-07-25 13:35 |
1 |
1,766 |
by gsuchunli Mon, 2016-07-25 13:56 |
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Altering substrate specificity by bp » Thu, 2016-12-22 02:45 |
2 |
1,769 |
by bp Thu, 2016-12-22 07:54 |
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minirosetta: how to reserve (inter-chain) disulfides after relax ? by lanselibai » Sat, 2015-01-24 10:56 |
0 |
1,777 |
by lanselibai Thu, 2015-01-29 00:50 |
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behind threading protocol by fred » Tue, 2011-10-25 05:37 |
0 |
1,779 |
by fred Mon, 2014-04-21 06:47 |
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Enzyme Design with additional covalent backbone bonds by mwfranklin » Wed, 2016-08-03 10:23 |
1 |
1,779 |
by rmoretti Mon, 2016-09-05 11:29 |
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creating compound task mover by aaj » Wed, 2016-02-24 04:48 |
2 |
1,781 |
by aaj Wed, 2016-02-24 07:37 |
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Packstat score in InterfaceAnalyzer by Vedasheersh » Fri, 2017-01-27 06:21 |
2 |
1,782 |
by smlewis Fri, 2017-01-27 07:20 |
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Missing atoms and cannot find atom pose when refining ligand position with EM density by BuddySphinx » Mon, 2018-12-31 16:22 |
2 |
1,788 |
by e3lm Tue, 2021-09-14 10:02 |
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membrane ab-initio modeling, is the quality comparable to comparative modeling of 20% id template? by fglaser » Thu, 2011-04-07 07:57 |
0 |
1,793 |
by fglaser Mon, 2014-04-21 06:47 |
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rosetta 3.3 - antibody by ron amon » Mon, 2014-07-21 00:44 |
1 |
1,802 |
by rmoretti Mon, 2014-07-21 10:51 |
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Docking to TM protein plus lipid bilayer by renedominik » Tue, 2019-03-12 06:58 |
3 |
1,803 |
by renedominik Tue, 2020-02-18 01:36 |
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Space Swap!!! by jrcf » Sun, 2016-02-14 11:43 |
2 |
1,805 |
by jrcf Mon, 2016-02-15 17:59 |
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KIC with fragments versus Next generation KIC by Loki01 » Fri, 2018-09-07 05:06 |
3 |
1,807 |
by smlewis Mon, 2018-09-10 11:48 |
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