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Rosetta 3 - Applications
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cartesian_ddg output by cossio » Thu, 2018-10-11 14:58 |
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1,810 |
by cossio Fri, 2018-10-12 04:43 |
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Running snugdock was crashed by "segmentation fault" by Sunyp_IM » Mon, 2017-08-21 05:03 |
3 |
1,819 |
by rmoretti Tue, 2017-08-22 09:03 |
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New CSRosetta toolbox by sn » Mon, 2017-04-24 12:42 |
3 |
1,829 |
by rmoretti Tue, 2017-04-25 06:41 |
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Problem with AtomPair constraint by jarek » Tue, 2012-10-09 07:28 |
1 |
1,832 |
by smlewis Mon, 2014-04-21 06:47 |
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does the loop kinetic support MPI now? by albumns » Fri, 2012-10-26 06:31 |
2 |
1,834 |
by smlewis Mon, 2014-04-21 06:47 |
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molfile_to_params script error by pablogalazdavison » Tue, 2015-07-07 21:22 |
1 |
1,836 |
by rmoretti Tue, 2015-07-14 14:59 |
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cartesian_ddg error: "Assertion `files.size() == 1` failed." by cossio » Fri, 2018-05-11 09:59 |
2 |
1,843 |
by cossio Fri, 2018-05-18 09:51 |
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protein protein interaction design by Negarsardar » Wed, 2019-05-15 06:13 |
3 |
1,846 |
by ajasja Wed, 2019-05-15 15:40 |
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Enzyme design output silent file and score file by deltag » Fri, 2012-09-28 13:07 |
1 |
1,854 |
by rmoretti Mon, 2014-04-21 06:47 |
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RosettaScripts - SetupNCS mover by felipet » Fri, 2016-03-25 12:42 |
2 |
1,863 |
by rmoretti Fri, 2016-04-29 08:26 |
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Checkpoint with rosetta3.4 by AmelieH » Mon, 2014-12-01 15:51 |
1 |
1,867 |
by rmoretti Wed, 2014-12-03 19:07 |
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ligand conformer generation for enzyme design by bo » Mon, 2013-02-11 16:51 |
1 |
1,869 |
by smlewis Mon, 2014-04-21 06:47 |
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flexpepdock_score_only by ays » Sun, 2014-09-21 06:17 |
2 |
1,872 |
by ays Tue, 2014-09-30 08:31 |
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relax a protein with phosphorylated serine residue by zruan » Thu, 2018-02-01 09:18 |
3 |
1,872 |
by rmoretti Tue, 2018-02-06 09:47 |
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Reproducing the exact result using information from previos run by nawsad » Thu, 2013-03-14 12:05 |
2 |
1,875 |
by nawsad Mon, 2014-04-21 06:47 |
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how to run my openmp programe in rosetta3.3? by lihowe » Mon, 2012-02-27 23:43 |
1 |
1,876 |
by smlewis Mon, 2014-04-21 06:47 |
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Trouble running Enzyme Design application by danaitop » Thu, 2016-08-11 13:34 |
2 |
1,877 |
by rmoretti Mon, 2016-09-05 11:10 |
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trouble in floppytail modelling by ytao » Thu, 2013-06-27 13:15 |
1 |
1,883 |
by ytao Mon, 2014-04-21 06:48 |
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modeling 4 linkers between 2 domains by pdbb » Thu, 2013-05-16 08:23 |
1 |
1,883 |
by smlewis Mon, 2014-04-21 06:47 |
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Representing Cross-linked nitrogens by jjlee2 » Sat, 2011-11-26 18:42 |
1 |
1,889 |
by smlewis Mon, 2014-04-21 06:47 |
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Can I change high-resolution filter in SymDock by attesor » Fri, 2015-10-23 07:35 |
2 |
1,889 |
by attesor Mon, 2015-10-26 09:01 |
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fold and dock protocol not working by ytao » Mon, 2012-11-26 15:33 |
1 |
1,889 |
by smlewis Mon, 2014-04-21 06:47 |
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Holes output interpretation by lah435 » Mon, 2012-06-04 15:02 |
1 |
1,894 |
by smlewis Mon, 2014-04-21 06:47 |
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Enzdes scorefile lost, can I recreate it by eyong123 » Wed, 2015-04-15 05:55 |
2 |
1,898 |
by eyong123 Wed, 2015-04-22 11:33 |
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Remodel: neighbor cutoff by felipet » Wed, 2014-07-16 08:11 |
2 |
1,900 |
by felipet Thu, 2014-07-17 10:13 |
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Design a peptide linked to small molecule ligand by shaunmk » Mon, 2015-03-02 09:05 |
1 |
1,901 |
by rmoretti Wed, 2015-03-25 12:39 |
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The question about ligand score function by asbelx » Sun, 2018-06-17 02:07 |
2 |
1,902 |
by asbelx Mon, 2018-06-18 22:34 |
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remodel gives no output by coomteng@gmail.com » Tue, 2018-03-06 07:40 |
3 |
1,902 |
by rmoretti Wed, 2018-03-07 08:44 |
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cross correlation calculation by jingwei xu » Sat, 2016-04-16 19:11 |
2 |
1,903 |
by jingwei xu Wed, 2016-05-04 23:26 |
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Coverage of sequence space? by johnnytam100 » Sun, 2019-04-21 23:25 |
4 |
1,910 |
by johnnytam100 Thu, 2019-04-25 19:28 |
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Filter based on ligand_is_touching by Swillard » Mon, 2017-09-11 19:00 |
3 |
1,912 |
by rmoretti Mon, 2018-11-12 14:35 |
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Ligand params file proton_chi parameters by staciekim » Thu, 2017-08-17 14:50 |
2 |
1,917 |
by staciekim Thu, 2017-08-17 17:06 |
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DDG_monomer application by shadrinams » Mon, 2018-02-12 12:14 |
2 |
1,919 |
by shadrinams Wed, 2018-03-14 07:46 |
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Ligand creation by Prasanth Kumar » Fri, 2013-08-02 09:48 |
1 |
1,920 |
by rmoretti Mon, 2014-04-21 06:48 |
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Comparative modeling by MRH » Mon, 2013-08-19 23:08 |
1 |
1,920 |
by smlewis Mon, 2014-04-21 06:48 |
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Problems with fixbb in Rosetta 3.5 by mdidonato » Wed, 2014-06-04 13:56 |
2 |
1,921 |
by mdidonato Wed, 2014-06-04 14:55 |
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regarding extracting silent file - renamed tag by shrutikhare » Thu, 2014-04-17 01:19 |
2 |
1,930 |
by shrutikhare Fri, 2014-04-18 23:11 |
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relax VS. backrub by jiongzhang » Mon, 2012-07-02 14:52 |
1 |
1,933 |
by smlewis Mon, 2014-04-21 06:47 |
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error mesages from RosettaDock by AlanZhao » Mon, 2011-03-21 11:42 |
1 |
1,938 |
by smlewis Mon, 2014-04-21 06:47 |
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Fixing and Building disulfide bonds in homology modeling by kamau » Wed, 2014-09-24 11:33 |
0 |
1,944 |
by kamau Wed, 2014-09-24 11:35 |
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latest version of rosetta unable to build models by pramod » Mon, 2014-11-03 11:31 |
1 |
1,946 |
by rmoretti Tue, 2014-11-04 10:33 |
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membrane modeling error by benniu2004 » Mon, 2013-07-01 17:59 |
1 |
1,947 |
by smlewis Mon, 2014-04-21 06:48 |
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The question of ligand docking with constraints by asbelx » Mon, 2018-06-11 09:39 |
3 |
1,948 |
by rmoretti Thu, 2018-06-28 12:58 |
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Any backrub expert? by johnnytam100 » Fri, 2019-03-01 01:58 |
4 |
1,958 |
by johnnytam100 Sun, 2019-03-03 23:42 |
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Failing Fragment libraries us Chemical shifts with Robettaa by kalabharath » Tue, 2015-04-28 19:33 |
2 |
1,958 |
by kalabharath Wed, 2015-04-29 16:21 |
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rosetta backrub by ladimafakher » Thu, 2018-10-04 08:01 |
4 |
1,961 |
by ladimafakher Thu, 2018-11-01 03:47 |
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submit_NGK.py not creating output files by nkato2 » Wed, 2013-08-28 23:37 |
1 |
1,962 |
by rmoretti Mon, 2014-04-21 06:48 |
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Incorporating iron-sulfur cluster into ROSETTA applications by Derek Smith » Thu, 2014-08-14 23:12 |
1 |
1,963 |
by rmoretti Fri, 2014-08-15 08:06 |
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Ensemble docking causes segmentation fault 11 by David Weis » Mon, 2017-03-06 14:30 |
2 |
1,978 |
by David Weis Mon, 2017-03-13 06:40 |
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ERROR: Unable to fill in missing atoms. by mieczyslaw » Tue, 2020-10-20 09:43 |
7 |
1,983 |
by rayyoung Thu, 2021-11-18 10:13 |
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How to add a residue to one chain of an existing structure? by sn » Mon, 2017-04-17 09:34 |
2 |
1,993 |
by sn Thu, 2017-04-20 21:43 |
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score:weights for fixbb application in Rosetta 3.5 by tylerborrman » Tue, 2015-07-28 14:16 |
2 |
1,995 |
by tylerborrman Wed, 2015-09-23 10:51 |
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Docking with constraint by Hongtham » Sat, 2014-12-27 09:56 |
2 |
1,999 |
by rmoretti Fri, 2015-01-02 09:43 |
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select_best_unique_ligand_poses - Ligand docking by subha » Thu, 2018-04-19 10:36 |
4 |
1,999 |
by subha Fri, 2018-04-20 12:49 |
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Ligand docking: ERROR: set_atom_base: atoms must be bonded! by mengzhang » Mon, 2014-05-12 12:36 |
1 |
2,000 |
by rmoretti Mon, 2014-05-12 15:08 |
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loop modeling scoring by Nicky_Learning_... » Wed, 2015-05-13 20:00 |
1 |
2,004 |
by rmoretti Mon, 2015-05-25 11:30 |
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protein-protein docking by cbala » Mon, 2011-04-18 09:15 |
1 |
2,008 |
by smlewis Mon, 2014-04-21 06:47 |
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Clustering issue by Loki01 » Thu, 2018-03-29 10:16 |
4 |
2,010 |
by Loki01 Thu, 2018-04-12 08:28 |
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Relax structure with metal cofactors by h_trasatti » Tue, 2017-03-14 14:04 |
2 |
2,015 |
by rmoretti Tue, 2017-03-28 08:51 |
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RosettaCM by DmitriiN » Sun, 2017-01-22 17:52 |
3 |
2,016 |
by smlewis Mon, 2017-01-23 06:26 |
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interface_delta ligand_docking by Prasanth Kumar » Tue, 2013-06-18 08:37 |
1 |
2,016 |
by rmoretti Mon, 2014-04-21 06:48 |
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contents of span file by tevang » Mon, 2013-04-15 05:01 |
1 |
2,016 |
by smlewis Mon, 2014-04-21 06:47 |
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FlexPepDock Concatenation by cam11 » Mon, 2014-08-11 07:39 |
2 |
2,017 |
by cam11 Wed, 2014-08-13 10:06 |
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Error with FlexPepDock by aloshbau » Sat, 2013-08-10 11:51 |
1 |
2,025 |
by rmoretti Mon, 2014-04-21 06:48 |
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Error with talaris2014.wts, which leads to a garbade scorefunction in loop modelling for protein-protein docking by Corvin » Wed, 2019-06-19 08:40 |
5 |
2,026 |
by rmoretti Tue, 2019-07-09 10:13 |
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Ligand Docking with RosettaScripts gives a ParsedProtocol exception by brspurri » Sun, 2017-05-14 17:51 |
2 |
2,038 |
by brspurri Mon, 2017-05-15 11:48 |
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KeyError: 'subject-id' in antibody modelling by bogac » Mon, 2017-03-06 02:00 |
2 |
2,043 |
by bogac Tue, 2017-03-07 02:11 |
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Filtering while clustering by David Hoover » Wed, 2011-03-30 07:03 |
1 |
2,046 |
by smlewis Mon, 2014-04-21 06:47 |
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restrain residues in docking by albumns » Sat, 2013-11-02 08:52 |
1 |
2,049 |
by jadolfbr Mon, 2014-04-21 06:48 |
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FlexPepDock in RosettaScripts keeps running by gw » Tue, 2012-08-21 12:31 |
1 |
2,064 |
by smlewis Mon, 2014-04-21 06:47 |
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Protein Design by ac.research » Wed, 2017-02-15 19:25 |
1 |
2,070 |
by cdbahl Sat, 2017-02-18 13:02 |
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Segmentation Fault in Fragment picking by ashu4487 » Fri, 2018-07-06 20:47 |
2 |
2,073 |
by ashu4487 Mon, 2018-07-16 19:24 |
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Make Fragments by Run » Mon, 2013-11-11 05:31 |
1 |
2,077 |
by smlewis Mon, 2014-04-21 06:48 |
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Error in using “loopmodel” for selective rebuilding by sushreet » Mon, 2014-07-14 11:57 |
2 |
2,082 |
by sushreet Tue, 2014-08-26 13:02 |
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Abinitio protocol and X-Ray diffraction data by allan.ferrari » Wed, 2015-08-12 12:49 |
2 |
2,082 |
by allan.ferrari Fri, 2015-08-28 12:07 |
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Specifying resfile in rosetta scripts by johnnytam100 » Mon, 2019-03-18 02:19 |
4 |
2,087 |
by rmoretti Fri, 2019-03-29 09:30 |
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The Usage of motifgraft by Sunyp_IM » Sun, 2017-11-19 20:22 |
2 |
2,089 |
by Sunyp_IM Mon, 2017-11-20 19:20 |
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number of structures in homology modeling for cluster analysis by pdbb » Fri, 2013-04-12 08:52 |
1 |
2,090 |
by smlewis Mon, 2014-04-21 06:47 |
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References where Rosetta is used to compute ddG of binding after mutation? by cossio » Tue, 2015-03-17 05:13 |
1 |
2,095 |
by rmoretti Wed, 2015-03-25 11:33 |
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limit_cluster_size default value by sacch » Thu, 2011-11-24 17:57 |
2 |
2,104 |
by sacch Mon, 2014-04-21 06:47 |
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Relax with a ligand is messing up the coordinates of the ligand by brspurri » Sat, 2015-01-24 12:39 |
1 |
2,110 |
by rmoretti Mon, 2015-01-26 12:15 |
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Perform MPI relax with movemap files by sn » Sun, 2017-03-05 13:18 |
3 |
2,111 |
by sn Mon, 2017-03-06 10:03 |
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Filter ddg_filter reports failure! by deepanshuiitb » Fri, 2015-02-27 18:19 |
2 |
2,114 |
by deepanshuiitb Sat, 2015-02-28 19:24 |
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creating a model using a base pdb and extending a chain by rlwoltz » Fri, 2013-07-12 15:35 |
1 |
2,117 |
by nawsad Mon, 2014-04-21 06:48 |
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Error during single state design by sujigeorge1979 » Sat, 2020-01-18 00:37 |
5 |
2,122 |
by rmoretti Thu, 2020-01-30 15:42 |
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"Segmentation fault" for "minirosetta.linuxgccrelease" by lanselibai » Tue, 2014-11-04 03:17 |
1 |
2,122 |
by rmoretti Tue, 2014-11-04 08:53 |
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homology modeling with threading says length mismatch between sequence and alignment by rqliang » Thu, 2015-08-06 11:46 |
2 |
2,124 |
by jharamesh Sat, 2015-08-08 19:51 |
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Got error when running minirosetta.linuxgccrelease on cluster but fine on Ubuntu by lanselibai » Mon, 2014-11-10 08:12 |
2 |
2,127 |
by lanselibai Tue, 2014-11-11 04:42 |
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Docking membrane ions and water by jrcf » Tue, 2017-02-07 15:47 |
3 |
2,128 |
by smlewis Wed, 2017-02-15 07:43 |
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Modeling more than one protein loop at the same time by hzhekova » Mon, 2018-01-15 14:03 |
2 |
2,140 |
by hzhekova Tue, 2018-01-16 10:31 |
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Flexible docking using rosetta density-fitting for DNA by helm » Thu, 2012-06-14 23:43 |
1 |
2,142 |
by smlewis Mon, 2014-04-21 06:47 |
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rosetta's keyword list by fred » Tue, 2014-01-21 06:03 |
1 |
2,146 |
by rmoretti Mon, 2014-04-21 06:48 |
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How tu use Delta filter's relax_mover by pocin » Sun, 2017-02-19 05:21 |
3 |
2,147 |
by rmoretti Wed, 2017-03-01 13:10 |
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symmetric fixbb design with design_hpatch by sdh_h » Sat, 2013-02-02 01:48 |
2 |
2,149 |
by ronj Mon, 2014-04-21 06:47 |
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"sparks failed" error when running "make_fragments.pl"? by Danielsebas » Tue, 2019-09-03 03:43 |
6 |
2,155 |
by Jacob_Verburgt Tue, 2020-03-10 14:39 |
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CoupledMoves not altering backbone coordinates? by amorin » Wed, 2021-01-20 11:38 |
15 |
2,160 |
by amorin Sat, 2021-02-27 20:29 |
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rosetta scores for mutated structures by harshkhare » Wed, 2011-11-23 09:30 |
1 |
2,161 |
by rmoretti Mon, 2014-04-21 06:47 |
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Allow region of protein to move in a certain direction by sn » Wed, 2017-08-23 17:07 |
3 |
2,164 |
by rmoretti Thu, 2017-08-24 11:00 |
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Calculate_protein_protein_ddg by kamau » Fri, 2015-01-30 11:27 |
2 |
2,171 |
by deepanshuiitb Thu, 2015-03-19 19:14 |
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How to eliminate "NUL"s when scoring PDBs? by lanselibai » Tue, 2014-10-14 10:04 |
2 |
2,173 |
by lanselibai Fri, 2014-10-17 03:36 |
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