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Rosetta 3 - Applications
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DNA Interface design by zadie1118 » Wed, 2011-06-22 07:05 |
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1,823 |
by zadie1118 Mon, 2014-04-21 06:47 |
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how to pick fragments for a transmembrane protein by tevang » Mon, 2012-05-28 06:52 |
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1,828 |
by tevang Mon, 2014-04-21 06:47 |
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cluster.linuxgccrelease Killed error by samuelrpita » Fri, 2015-11-20 05:56 |
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1,829 |
by rmoretti Tue, 2015-11-24 16:07 |
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Molecular Replacement with multiple chains by brspurri » Fri, 2011-06-10 08:25 |
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1,834 |
by brspurri Mon, 2014-04-21 06:47 |
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Rna Denovo by helderveras » Wed, 2020-05-06 08:40 |
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1,843 |
by everyday847 Wed, 2020-05-20 08:52 |
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how to find help informations on rosetta_scripts in rosetta3.10 by xinmiaohe » Mon, 2019-08-26 14:48 |
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1,843 |
by xinmiaohe Tue, 2019-08-27 08:37 |
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Unable to understand fragment picking tutorial points. by Danielsebas » Thu, 2019-09-05 03:44 |
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1,845 |
by danpf Fri, 2019-09-06 11:29 |
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behind threading protocol by fred » Tue, 2011-10-25 05:37 |
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1,850 |
by fred Mon, 2014-04-21 06:47 |
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-loops:fa_input not found in command line top-level context by swarekwood » Thu, 2017-08-24 03:15 |
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1,855 |
by swarekwood Fri, 2017-08-25 05:08 |
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Antibody Docking application by Maryam_tabasinezhad » Sat, 2015-09-05 09:58 |
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1,858 |
by jadolfbr Wed, 2015-09-09 12:35 |
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membrane ab-initio modeling, is the quality comparable to comparative modeling of 20% id template? by fglaser » Thu, 2011-04-07 07:57 |
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1,876 |
by fglaser Mon, 2014-04-21 06:47 |
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error--rosetta fragment‐based refinement protocol for refinement against EM density by gsuchunli » Mon, 2016-07-25 13:35 |
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1,877 |
by gsuchunli Mon, 2016-07-25 13:56 |
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minirosetta: how to reserve (inter-chain) disulfides after relax ? by lanselibai » Sat, 2015-01-24 10:56 |
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1,881 |
by lanselibai Thu, 2015-01-29 00:50 |
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Error with the mpi version of simple_cycpep_predict by Florent Langenfeld » Wed, 2020-02-05 05:16 |
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1,883 |
by vmulligan Fri, 2020-04-10 02:54 |
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How to specify only design surface residues and loops by RosettaScripts? by johnnytam100 » Sun, 2019-04-07 21:47 |
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1,886 |
by johnnytam100 Wed, 2019-04-10 02:48 |
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Collecting all decoys from batch files by aep » Sun, 2016-08-07 12:23 |
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1,886 |
by aep Sat, 2016-08-13 13:03 |
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Enzyme Design with additional covalent backbone bonds by mwfranklin » Wed, 2016-08-03 10:23 |
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1,905 |
by rmoretti Mon, 2016-09-05 11:29 |
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Getting error with Rosetta "antibody.linuxgccrelease" command by Sunyp_IM » Mon, 2017-08-07 19:40 |
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1,908 |
by smlewis Tue, 2017-08-15 23:19 |
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Rosetta ab initio run gives 0.00 RMSD for generated 2000 models? (run still in progress) by Danielsebas » Mon, 2019-09-23 03:24 |
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1,915 |
by smlewis Mon, 2019-09-23 11:42 |
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Regarding the efficiency of the new low resolution ligand-docking movement “Transform”. by Martin Floor » Mon, 2017-05-15 09:19 |
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1,916 |
by Martin Floor Mon, 2017-05-15 11:13 |
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Translate mover chain X doesnot exist. by surya » Thu, 2020-07-09 08:36 |
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1,916 |
by rmoretti Tue, 2020-07-14 10:54 |
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Negative Design by rbjacob » Thu, 2018-10-11 09:18 |
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1,923 |
by smlewis Mon, 2018-10-15 08:42 |
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Problem with AtomPair constraint by jarek » Tue, 2012-10-09 07:28 |
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1,936 |
by smlewis Mon, 2014-04-21 06:47 |
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How to concatenate the 3-mer and 9-mer files for RosettaCM? by lanselibai » Fri, 2020-05-08 05:38 |
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1,938 |
by danpf Tue, 2020-05-12 10:58 |
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rosetta 3.3 - antibody by ron amon » Mon, 2014-07-21 00:44 |
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1,939 |
by rmoretti Mon, 2014-07-21 10:51 |
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Enzyme design output silent file and score file by deltag » Fri, 2012-09-28 13:07 |
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1,943 |
by rmoretti Mon, 2014-04-21 06:47 |
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Altering substrate specificity by bp » Thu, 2016-12-22 02:45 |
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1,946 |
by bp Thu, 2016-12-22 07:54 |
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creating compound task mover by aaj » Wed, 2016-02-24 04:48 |
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1,946 |
by aaj Wed, 2016-02-24 07:37 |
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molfile_to_params script error by pablogalazdavison » Tue, 2015-07-07 21:22 |
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1,959 |
by rmoretti Tue, 2015-07-14 14:59 |
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Space Swap!!! by jrcf » Sun, 2016-02-14 11:43 |
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1,963 |
by jrcf Mon, 2016-02-15 17:59 |
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how to run my openmp programe in rosetta3.3? by lihowe » Mon, 2012-02-27 23:43 |
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1,971 |
by smlewis Mon, 2014-04-21 06:47 |
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does the loop kinetic support MPI now? by albumns » Fri, 2012-10-26 06:31 |
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1,978 |
by smlewis Mon, 2014-04-21 06:47 |
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ligand conformer generation for enzyme design by bo » Mon, 2013-02-11 16:51 |
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1,981 |
by smlewis Mon, 2014-04-21 06:47 |
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modeling 4 linkers between 2 domains by pdbb » Thu, 2013-05-16 08:23 |
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1,983 |
by smlewis Mon, 2014-04-21 06:47 |
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Holes output interpretation by lah435 » Mon, 2012-06-04 15:02 |
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1,991 |
by smlewis Mon, 2014-04-21 06:47 |
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Behavior of nstruct by johnnytam100 » Wed, 2019-05-15 22:22 |
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1,991 |
by johnnytam100 Tue, 2019-05-21 20:48 |
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Packstat score in InterfaceAnalyzer by Vedasheersh » Fri, 2017-01-27 06:21 |
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1,997 |
by smlewis Fri, 2017-01-27 07:20 |
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fold and dock protocol not working by ytao » Mon, 2012-11-26 15:33 |
1 |
1,997 |
by smlewis Mon, 2014-04-21 06:47 |
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Representing Cross-linked nitrogens by jjlee2 » Sat, 2011-11-26 18:42 |
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2,001 |
by smlewis Mon, 2014-04-21 06:47 |
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trouble in floppytail modelling by ytao » Thu, 2013-06-27 13:15 |
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2,003 |
by ytao Mon, 2014-04-21 06:48 |
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Design a peptide linked to small molecule ligand by shaunmk » Mon, 2015-03-02 09:05 |
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2,006 |
by rmoretti Wed, 2015-03-25 12:39 |
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Checkpoint with rosetta3.4 by AmelieH » Mon, 2014-12-01 15:51 |
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2,010 |
by rmoretti Wed, 2014-12-03 19:07 |
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flexpepdock_score_only by ays » Sun, 2014-09-21 06:17 |
2 |
2,010 |
by ays Tue, 2014-09-30 08:31 |
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cryptic error "Got some signal... It is:15" -- an issue with 'fixbb', or something else? by dantimatter » Wed, 2019-10-16 14:59 |
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2,019 |
by dantimatter Wed, 2019-10-30 09:43 |
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Running snugdock was crashed by "segmentation fault" by Sunyp_IM » Mon, 2017-08-21 05:03 |
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2,021 |
by rmoretti Tue, 2017-08-22 09:03 |
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New CSRosetta toolbox by sn » Mon, 2017-04-24 12:42 |
3 |
2,022 |
by rmoretti Tue, 2017-04-25 06:41 |
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Ligand creation by Prasanth Kumar » Fri, 2013-08-02 09:48 |
1 |
2,024 |
by rmoretti Mon, 2014-04-21 06:48 |
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Warnings during relax by cossio » Thu, 2018-10-11 14:42 |
2 |
2,027 |
by rmoretti Mon, 2019-11-04 13:56 |
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Comparative modeling by MRH » Mon, 2013-08-19 23:08 |
1 |
2,028 |
by smlewis Mon, 2014-04-21 06:48 |
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Reproducing the exact result using information from previos run by nawsad » Thu, 2013-03-14 12:05 |
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2,032 |
by nawsad Mon, 2014-04-21 06:47 |
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Trouble running Enzyme Design application by danaitop » Thu, 2016-08-11 13:34 |
2 |
2,035 |
by rmoretti Mon, 2016-09-05 11:10 |
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RosettaScripts - SetupNCS mover by felipet » Fri, 2016-03-25 12:42 |
2 |
2,040 |
by rmoretti Fri, 2016-04-29 08:26 |
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cross correlation calculation by jingwei xu » Sat, 2016-04-16 19:11 |
2 |
2,046 |
by jingwei xu Wed, 2016-05-04 23:26 |
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Fixing and Building disulfide bonds in homology modeling by kamau » Wed, 2014-09-24 11:33 |
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2,050 |
by kamau Wed, 2014-09-24 11:35 |
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membrane modeling error by benniu2004 » Mon, 2013-07-01 17:59 |
1 |
2,051 |
by smlewis Mon, 2014-04-21 06:48 |
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relax VS. backrub by jiongzhang » Mon, 2012-07-02 14:52 |
1 |
2,053 |
by smlewis Mon, 2014-04-21 06:47 |
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Remodel: neighbor cutoff by felipet » Wed, 2014-07-16 08:11 |
2 |
2,056 |
by felipet Thu, 2014-07-17 10:13 |
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Enzdes scorefile lost, can I recreate it by eyong123 » Wed, 2015-04-15 05:55 |
2 |
2,057 |
by eyong123 Wed, 2015-04-22 11:33 |
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RosettaDesign error with Option file open failed by xingqing326 » Sun, 2020-04-19 01:56 |
4 |
2,060 |
by xingqing326 Tue, 2020-04-21 19:11 |
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error mesages from RosettaDock by AlanZhao » Mon, 2011-03-21 11:42 |
1 |
2,060 |
by smlewis Mon, 2014-04-21 06:47 |
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Problems with fixbb in Rosetta 3.5 by mdidonato » Wed, 2014-06-04 13:56 |
2 |
2,061 |
by mdidonato Wed, 2014-06-04 14:55 |
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KIC with fragments versus Next generation KIC by Loki01 » Fri, 2018-09-07 05:06 |
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2,063 |
by smlewis Mon, 2018-09-10 11:48 |
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Can I change high-resolution filter in SymDock by attesor » Fri, 2015-10-23 07:35 |
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2,067 |
by attesor Mon, 2015-10-26 09:01 |
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regarding extracting silent file - renamed tag by shrutikhare » Thu, 2014-04-17 01:19 |
2 |
2,076 |
by shrutikhare Fri, 2014-04-18 23:11 |
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Docking to TM protein plus lipid bilayer by renedominik » Tue, 2019-03-12 06:58 |
3 |
2,076 |
by renedominik Tue, 2020-02-18 01:36 |
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submit_NGK.py not creating output files by nkato2 » Wed, 2013-08-28 23:37 |
1 |
2,086 |
by rmoretti Mon, 2014-04-21 06:48 |
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relax a protein with phosphorylated serine residue by zruan » Thu, 2018-02-01 09:18 |
3 |
2,091 |
by rmoretti Tue, 2018-02-06 09:47 |
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Incorporating iron-sulfur cluster into ROSETTA applications by Derek Smith » Thu, 2014-08-14 23:12 |
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2,096 |
by rmoretti Fri, 2014-08-15 08:06 |
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Filter based on ligand_is_touching by Swillard » Mon, 2017-09-11 19:00 |
3 |
2,102 |
by rmoretti Mon, 2018-11-12 14:35 |
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Failing Fragment libraries us Chemical shifts with Robettaa by kalabharath » Tue, 2015-04-28 19:33 |
2 |
2,106 |
by kalabharath Wed, 2015-04-29 16:21 |
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Ligand params file proton_chi parameters by staciekim » Thu, 2017-08-17 14:50 |
2 |
2,107 |
by staciekim Thu, 2017-08-17 17:06 |
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contents of span file by tevang » Mon, 2013-04-15 05:01 |
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2,121 |
by smlewis Mon, 2014-04-21 06:47 |
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protein-protein docking by cbala » Mon, 2011-04-18 09:15 |
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2,123 |
by smlewis Mon, 2014-04-21 06:47 |
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latest version of rosetta unable to build models by pramod » Mon, 2014-11-03 11:31 |
1 |
2,128 |
by rmoretti Tue, 2014-11-04 10:33 |
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cartesian_ddg output by cossio » Thu, 2018-10-11 14:58 |
2 |
2,129 |
by cossio Fri, 2018-10-12 04:43 |
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RosettaMP: issue with generating .lips4 file by ksy141 » Mon, 2019-01-21 17:17 |
5 |
2,129 |
by noahC_noahDo Fri, 2020-11-20 11:29 |
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cartesian_ddg error: "Assertion `files.size() == 1` failed." by cossio » Fri, 2018-05-11 09:59 |
2 |
2,130 |
by cossio Fri, 2018-05-18 09:51 |
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score:weights for fixbb application in Rosetta 3.5 by tylerborrman » Tue, 2015-07-28 14:16 |
2 |
2,143 |
by tylerborrman Wed, 2015-09-23 10:51 |
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Missing atoms and cannot find atom pose when refining ligand position with EM density by BuddySphinx » Mon, 2018-12-31 16:22 |
2 |
2,145 |
by e3lm Tue, 2021-09-14 10:02 |
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Ensemble docking causes segmentation fault 11 by David Weis » Mon, 2017-03-06 14:30 |
2 |
2,145 |
by David Weis Mon, 2017-03-13 06:40 |
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interface_delta ligand_docking by Prasanth Kumar » Tue, 2013-06-18 08:37 |
1 |
2,146 |
by rmoretti Mon, 2014-04-21 06:48 |
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Docking with constraint by Hongtham » Sat, 2014-12-27 09:56 |
2 |
2,147 |
by rmoretti Fri, 2015-01-02 09:43 |
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Error with FlexPepDock by aloshbau » Sat, 2013-08-10 11:51 |
1 |
2,150 |
by rmoretti Mon, 2014-04-21 06:48 |
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Ligand docking: ERROR: set_atom_base: atoms must be bonded! by mengzhang » Mon, 2014-05-12 12:36 |
1 |
2,156 |
by rmoretti Mon, 2014-05-12 15:08 |
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restrain residues in docking by albumns » Sat, 2013-11-02 08:52 |
1 |
2,158 |
by jadolfbr Mon, 2014-04-21 06:48 |
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Filtering while clustering by David Hoover » Wed, 2011-03-30 07:03 |
1 |
2,159 |
by smlewis Mon, 2014-04-21 06:47 |
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Problem with mpirun/mpiexec by ahansel » Fri, 2020-07-10 08:37 |
1 |
2,160 |
by rmoretti Fri, 2020-07-10 09:59 |
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loop modeling scoring by Nicky_Learning_... » Wed, 2015-05-13 20:00 |
1 |
2,169 |
by rmoretti Mon, 2015-05-25 11:30 |
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FlexPepDock Concatenation by cam11 » Mon, 2014-08-11 07:39 |
2 |
2,171 |
by cam11 Wed, 2014-08-13 10:06 |
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DDG_monomer application by shadrinams » Mon, 2018-02-12 12:14 |
2 |
2,176 |
by shadrinams Wed, 2018-03-14 07:46 |
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FlexPepDock in RosettaScripts keeps running by gw » Tue, 2012-08-21 12:31 |
1 |
2,179 |
by smlewis Mon, 2014-04-21 06:47 |
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protein protein interaction design by Negarsardar » Wed, 2019-05-15 06:13 |
3 |
2,182 |
by ajasja Wed, 2019-05-15 15:40 |
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RosettaCM by DmitriiN » Sun, 2017-01-22 17:52 |
3 |
2,189 |
by smlewis Mon, 2017-01-23 06:26 |
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remodel gives no output by coomteng@gmail.com » Tue, 2018-03-06 07:40 |
3 |
2,193 |
by rmoretti Wed, 2018-03-07 08:44 |
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number of structures in homology modeling for cluster analysis by pdbb » Fri, 2013-04-12 08:52 |
1 |
2,196 |
by smlewis Mon, 2014-04-21 06:47 |
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Relax structure with metal cofactors by h_trasatti » Tue, 2017-03-14 14:04 |
2 |
2,201 |
by rmoretti Tue, 2017-03-28 08:51 |
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Protein Design by ac.research » Wed, 2017-02-15 19:25 |
1 |
2,205 |
by cdbahl Sat, 2017-02-18 13:02 |
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How to add a residue to one chain of an existing structure? by sn » Mon, 2017-04-17 09:34 |
2 |
2,207 |
by sn Thu, 2017-04-20 21:43 |
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Make Fragments by Run » Mon, 2013-11-11 05:31 |
1 |
2,207 |
by smlewis Mon, 2014-04-21 06:48 |
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creating a model using a base pdb and extending a chain by rlwoltz » Fri, 2013-07-12 15:35 |
1 |
2,224 |
by nawsad Mon, 2014-04-21 06:48 |
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