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Rosetta 3 - Applications
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modeling an extracellular loop of a transmembrane protein by Hothman » Fri, 2016-08-12 06:16 |
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3,668 |
by rmoretti Mon, 2016-09-05 10:59 |
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fragment picker does not follow dihedral constraints by attesor » Tue, 2016-05-24 23:22 |
12 |
8,440 |
by smlewis Wed, 2016-08-17 07:56 |
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Collecting all decoys from batch files by aep » Sun, 2016-08-07 12:23 |
2 |
1,905 |
by aep Sat, 2016-08-13 13:03 |
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error--rosetta fragment‐based refinement protocol for refinement against EM density by gsuchunli » Mon, 2016-07-25 13:35 |
1 |
1,899 |
by gsuchunli Mon, 2016-07-25 13:56 |
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RosettaMatch and CST files by mwfranklin » Mon, 2016-07-25 11:49 |
0 |
1,737 |
by mwfranklin Mon, 2016-07-25 11:49 |
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Loop design with length variation by jarod » Thu, 2016-06-16 19:54 |
3 |
3,028 |
by rmoretti Tue, 2016-07-12 09:41 |
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Rebuilding the structure from unknown residues by sushreet » Mon, 2016-06-27 09:32 |
4 |
3,936 |
by rmoretti Tue, 2016-07-12 09:35 |
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revert_design_to_native app comparison to FavorNativeResidue mover by nwhoppe » Wed, 2016-06-29 14:35 |
3 |
3,299 |
by rmoretti Tue, 2016-07-12 09:30 |
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scoring input pdbs as the same as docking score by hamedkhakzad » Fri, 2016-07-01 07:15 |
3 |
2,839 |
by rmoretti Tue, 2016-07-12 09:05 |
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error--rosetta fragment‐based refinement protocol for refinement against EM density by gsuchunli » Wed, 2016-07-06 10:35 |
1 |
1,595 |
by rmoretti Tue, 2016-07-12 08:56 |
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How to restart RASREC run by aep » Fri, 2016-07-01 04:39 |
2 |
1,799 |
by aep Fri, 2016-07-01 06:54 |
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fragment_picker.mpi.linuxgccrelease can't find : libsqlite3.so by starone » Mon, 2016-06-20 19:22 |
11 |
10,107 |
by starone Fri, 2016-06-24 18:29 |
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Ligand Docking with ARLS by cam11 » Thu, 2016-06-23 09:34 |
1 |
1,649 |
by rmoretti Thu, 2016-06-23 10:55 |
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problem creating lips4 file using run_lips.pl by adva » Sun, 2015-02-15 06:22 |
5 |
6,183 |
by linucks Mon, 2016-06-20 12:02 |
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xyzVector error in Enzyme design by ajmbarbosa » Tue, 2016-01-05 09:46 |
3 |
3,355 |
by rmoretti Fri, 2016-06-17 10:36 |
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No output with docking full protocol by JulienO » Mon, 2016-05-30 02:16 |
1 |
1,516 |
by rmoretti Fri, 2016-06-17 10:24 |
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No output pdb files after docking protein and DNA/RNA by yzq » Thu, 2012-10-25 08:23 |
11 |
9,734 |
by rmoretti Fri, 2016-06-17 10:22 |
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Error in Loop modeling and other queries by ashu4487 » Wed, 2016-05-11 18:23 |
1 |
1,752 |
by rmoretti Fri, 2016-06-17 10:15 |
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Helical Symmetry Axis by Sandy » Tue, 2016-05-31 18:48 |
0 |
1,359 |
by Sandy Tue, 2016-05-31 18:48 |
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Rosetta relax problem by jingwei xu » Wed, 2016-03-09 21:41 |
2 |
4,163 |
by jingwei xu Wed, 2016-05-04 23:28 |
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cross correlation calculation by jingwei xu » Sat, 2016-04-16 19:11 |
2 |
2,081 |
by jingwei xu Wed, 2016-05-04 23:26 |
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ddg_monomer: what is the theoretical solution condition for the scoring? by lanselibai » Sat, 2016-04-30 03:26 |
3 |
3,017 |
by smlewis Mon, 2016-05-02 08:20 |
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Symmetry definition for apolar helix by vanrooyenjason » Tue, 2016-01-05 05:20 |
1 |
2,611 |
by rmoretti Fri, 2016-04-29 09:21 |
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Ab-initio peptide-protein docking by suhail » Sun, 2013-06-23 16:20 |
9 |
10,080 |
by rmoretti Fri, 2016-04-29 08:57 |
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RosettaScripts - SetupNCS mover by felipet » Fri, 2016-03-25 12:42 |
2 |
2,073 |
by rmoretti Fri, 2016-04-29 08:26 |
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ddg_monomer mutations list: How to specify chain ID? by cossio » Tue, 2014-12-09 14:26 |
13 |
12,739 |
by rmoretti Thu, 2016-04-28 16:43 |
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Files for Spatial Constraints by Derek » Tue, 2016-04-12 01:00 |
1 |
1,476 |
by Derek Wed, 2016-04-27 01:31 |
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Finding lowest energy structure among generated structures by Marius1987 » Sun, 2016-04-10 11:38 |
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1,218 |
by Marius1987 Sun, 2016-04-10 12:09 |
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Enzyme Design - Score File by nwhoppe » Thu, 2016-04-07 15:11 |
1 |
1,636 |
by rmoretti Fri, 2016-04-08 07:39 |
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Constraints in RosettaCM by kbuhr » Fri, 2015-07-31 06:55 |
3 |
3,340 |
by kbuhr Mon, 2016-03-28 01:08 |
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Missing CS-HM-Rosetta Binary files by Marius1987 » Wed, 2016-02-10 05:52 |
3 |
3,132 |
by Marius1987 Mon, 2016-03-14 04:34 |
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De novo model-building guided by exprimental density data by dee2711453 » Thu, 2016-03-10 17:28 |
3 |
2,752 |
by dee2711453 Fri, 2016-03-11 21:32 |
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Generating non-redundat dataset for loop models by dario.corrada » Wed, 2016-03-09 03:00 |
1 |
1,437 |
by smlewis Wed, 2016-03-09 04:11 |
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wallpaper symmetry definition file by aaj » Fri, 2016-02-26 08:40 |
0 |
1,074 |
by aaj Fri, 2016-02-26 08:40 |
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Difference between movemap and -pivot_residues by aloshbau » Wed, 2016-02-24 13:21 |
1 |
1,690 |
by rmoretti Wed, 2016-02-24 14:39 |
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creating compound task mover by aaj » Wed, 2016-02-24 04:48 |
2 |
1,978 |
by aaj Wed, 2016-02-24 07:37 |
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Space Swap!!! by jrcf » Sun, 2016-02-14 11:43 |
2 |
2,001 |
by jrcf Mon, 2016-02-15 17:59 |
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No Space by jrcf » Mon, 2016-01-11 16:18 |
3 |
2,675 |
by jrcf Fri, 2016-02-12 16:42 |
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CS-HM-Rosetta by pwurm » Thu, 2013-03-07 12:56 |
6 |
5,723 |
by Marius1987 Fri, 2016-02-05 07:20 |
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Homology Modelling with cofactors by Derek Smith » Thu, 2015-07-09 08:24 |
3 |
3,615 |
by Derek Smith Wed, 2016-02-03 05:47 |
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ROSETTALIGAND: How to prepare data to plot ROC curves using rosettaligand docking result??? by Ryhon Wang » Mon, 2016-01-04 22:36 |
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2,461 |
by rmoretti Tue, 2016-01-05 08:35 |
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RosettaLigand: How to score native pose in protein-ligand docking experiment? by Ryhon Wang » Tue, 2015-11-10 01:30 |
5 |
4,605 |
by Ryhon Wang Mon, 2016-01-04 19:59 |
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Fusing C-terminal or N-terminal segments onto proteins using Remodel by achambe » Mon, 2016-01-04 11:26 |
0 |
1,185 |
by achambe Mon, 2016-01-04 11:26 |
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CartesianRefiner compilation problem by DmitriiN » Tue, 2015-12-15 08:52 |
1 |
1,557 |
by rmoretti Tue, 2015-12-15 09:48 |
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Inserting residues using RosettaRemodel by eleishaj » Tue, 2015-11-24 08:54 |
7 |
6,591 |
by eyong123 Wed, 2015-12-09 07:17 |
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RosettaScripts - FastRelax loops by jtmacd » Wed, 2015-11-18 09:32 |
2 |
3,355 |
by jtmacd Fri, 2015-12-04 03:11 |
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Fixing part of a ligand in dock-design by hssnzdh2 » Mon, 2015-11-23 17:14 |
1 |
1,733 |
by rmoretti Tue, 2015-11-24 16:16 |
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cluster.linuxgccrelease Killed error by samuelrpita » Fri, 2015-11-20 05:56 |
1 |
1,859 |
by rmoretti Tue, 2015-11-24 16:07 |
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RosettaCM Biological Assembly by jrcf » Mon, 2015-10-26 11:01 |
5 |
6,072 |
by rmoretti Tue, 2015-11-24 15:30 |
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Docking seems to not parse the -nstruct flag by rosend » Tue, 2015-11-17 12:01 |
2 |
3,050 |
by rosend Tue, 2015-11-17 12:12 |
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very good I_sc values (if not too good) by attesor » Tue, 2015-11-03 03:30 |
2 |
2,499 |
by attesor Tue, 2015-11-17 07:36 |
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what does initialize_rigid_body_dofs do? by attesor » Mon, 2015-10-26 05:12 |
3 |
3,149 |
by rmoretti Tue, 2015-11-10 11:35 |
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Protein/Protein Ddg demo: How to write predicted mutant structures? by cossio » Wed, 2015-11-04 20:14 |
1 |
1,485 |
by rmoretti Tue, 2015-11-10 11:10 |
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FloppyTail :How to specify range of design(mutation) by syoifczeri » Mon, 2015-11-02 04:14 |
6 |
5,203 |
by syoifczeri Sat, 2015-11-07 21:42 |
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JD2 MPI by jrcf » Wed, 2015-10-28 14:45 |
1 |
1,778 |
by rmoretti Sat, 2015-10-31 08:57 |
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Can I change high-resolution filter in SymDock by attesor » Fri, 2015-10-23 07:35 |
2 |
2,105 |
by attesor Mon, 2015-10-26 09:01 |
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heads up for constraints using GAUSSIANFUNC by attesor » Thu, 2015-10-22 07:30 |
1 |
1,474 |
by smlewis Thu, 2015-10-22 08:04 |
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symmetric docking and constraints by ytao » Thu, 2013-05-02 12:08 |
5 |
6,486 |
by attesor Wed, 2015-10-21 13:53 |
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Rosetta Holes by zsun12 » Wed, 2015-09-30 11:40 |
1 |
3,163 |
by rmoretti Mon, 2015-10-12 15:20 |
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Rosetta dock irmsd by Pernille » Sun, 2015-04-26 13:51 |
5 |
5,575 |
by rmoretti Mon, 2015-10-12 15:10 |
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Generate fragment file on my computer by jrcf » Mon, 2015-09-21 15:41 |
2 |
3,347 |
by jrcf Mon, 2015-10-05 21:32 |
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ddg_monomer "ERROR: seqpos >= 1" by cossio » Fri, 2015-10-02 12:20 |
1 |
1,793 |
by rmoretti Fri, 2015-10-02 12:30 |
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-kill_hairpin error by jadolfbr » Wed, 2011-10-05 18:53 |
11 |
13,827 |
by rmoretti Mon, 2015-09-28 15:00 |
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fixbb algorithm reference? by tylerborrman » Wed, 2015-09-23 10:20 |
4 |
4,178 |
by tylerborrman Mon, 2015-09-28 09:30 |
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score:weights for fixbb application in Rosetta 3.5 by tylerborrman » Tue, 2015-07-28 14:16 |
2 |
2,170 |
by tylerborrman Wed, 2015-09-23 10:51 |
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Not found some Flags by jrcf » Sat, 2015-09-19 12:08 |
2 |
3,111 |
by jrcf Mon, 2015-09-21 11:10 |
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Fnat and Irms are nan in score.sc from docking_protocol? by cossio » Sun, 2015-09-13 07:34 |
2 |
2,832 |
by rmoretti Thu, 2015-09-17 12:47 |
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Use NMR ensemble in protein-protein docking? by cossio » Sun, 2015-09-13 07:57 |
2 |
2,491 |
by cossio Tue, 2015-09-15 12:48 |
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How to model missing residues on a protein from multiple PDB files? by cossio » Fri, 2015-08-21 07:18 |
6 |
10,925 |
by rmoretti Fri, 2015-09-11 13:27 |
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Antibody Docking application by Maryam_tabasinezhad » Sat, 2015-09-05 09:58 |
1 |
1,879 |
by jadolfbr Wed, 2015-09-09 12:35 |
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Antibody modeling by Maryam_tabasinezhad » Fri, 2015-09-04 11:00 |
4 |
4,020 |
by rmoretti Wed, 2015-09-09 12:08 |
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Is it possible to restart the ddg_monomer.linuxgccrelease? by lanselibai » Mon, 2015-09-07 03:46 |
1 |
1,622 |
by rmoretti Wed, 2015-09-09 12:01 |
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ERROR: Rosetta does not recognize the property: SIDECHAIN_THIOL, when running minimize_with_cst.linuxgccrelease by cossio » Thu, 2015-09-03 08:46 |
1 |
2,486 |
by rmoretti Fri, 2015-09-04 10:25 |
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InterfaceAnalyzer dSasa calculation by mintseris » Wed, 2015-09-02 09:43 |
2 |
3,585 |
by jadolfbr Thu, 2015-09-03 16:18 |
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Distinctions between InterfaceAnalyzer and RosettaScript by achambe » Wed, 2015-06-17 10:14 |
6 |
6,420 |
by rmoretti Wed, 2015-09-02 12:43 |
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Per residue scoring by chelsell » Mon, 2015-08-17 14:43 |
3 |
3,372 |
by rmoretti Wed, 2015-09-02 12:33 |
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Abinitio protocol and X-Ray diffraction data by allan.ferrari » Wed, 2015-08-12 12:49 |
2 |
2,285 |
by allan.ferrari Fri, 2015-08-28 12:07 |
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autoNOE peak lists by aep » Thu, 2015-08-06 06:15 |
1 |
1,698 |
by sgourn Tue, 2015-08-18 18:25 |
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variable length fragments for Ab initio by attesor » Wed, 2015-07-01 06:13 |
7 |
5,502 |
by rmoretti Tue, 2015-08-18 16:47 |
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Homology modelling applies alignment wrong by bernhardcl » Thu, 2015-08-06 09:39 |
1 |
1,618 |
by bernhardcl Tue, 2015-08-11 09:11 |
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homology modeling with threading says length mismatch between sequence and alignment by rqliang » Thu, 2015-08-06 11:46 |
2 |
2,314 |
by jharamesh Sat, 2015-08-08 19:51 |
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how to generate Fragments using up to 2001 structures only by oppopomoz » Sat, 2015-07-25 00:43 |
1 |
1,603 |
by rmoretti Thu, 2015-08-06 08:57 |
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molfile_to_params script error by pablogalazdavison » Tue, 2015-07-07 21:22 |
1 |
1,980 |
by rmoretti Tue, 2015-07-14 14:59 |
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How to use Rosetta to DISCARD a protein-protein docking interface? by cossio » Tue, 2015-05-26 06:24 |
2 |
2,565 |
by rmoretti Sat, 2015-07-11 13:38 |
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Docking with loop rebuilding by kxiao » Sun, 2015-06-28 19:37 |
1 |
1,712 |
by rmoretti Fri, 2015-07-03 14:41 |
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Enzdes score file discrepancy between generated pdb and scores.out by eyong123 » Wed, 2015-03-25 08:52 |
6 |
5,835 |
by eyong123 Mon, 2015-06-29 04:44 |
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docking with constraints and flexible bb by mintseris » Mon, 2015-06-22 09:07 |
2 |
2,447 |
by mintseris Wed, 2015-06-24 22:04 |
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auto_setup_metals flag with loop modeling application fails by beowulfey » Wed, 2015-06-10 07:44 |
3 |
3,321 |
by beowulfey Tue, 2015-06-23 16:10 |
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Loop modeling: KIC with fragments producing unusual models by kamau » Mon, 2015-06-01 12:06 |
1 |
1,786 |
by rmoretti Sat, 2015-06-20 20:07 |
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folding ectodomain in membrane ab initio by freedman » Mon, 2015-05-25 21:09 |
3 |
3,098 |
by rmoretti Fri, 2015-06-19 13:53 |
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Ensemble Docking in Rosetta3.5? by protos_heis » Fri, 2015-05-22 06:42 |
7 |
6,858 |
by protos_heis Mon, 2015-06-08 07:00 |
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Resfile as a input for InterfaceAnalyzer by palak8669 » Sun, 2015-06-07 21:46 |
1 |
1,572 |
by smlewis Mon, 2015-06-08 06:35 |
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rotamer library in coupled_moves by mtyras » Fri, 2015-05-29 07:46 |
2 |
2,987 |
by mtyras Mon, 2015-06-08 03:18 |
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Trouble enforcing a disulfide in loop building by chelsell » Sun, 2015-05-10 16:31 |
2 |
2,945 |
by chelsell Wed, 2015-05-27 14:36 |
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Should I trust the score output from relax used with a protein complex? by cossio » Thu, 2015-05-07 06:08 |
1 |
1,675 |
by rmoretti Mon, 2015-05-25 12:37 |
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Loopmodel with DNA has no energy score by Nicky_Learning_... » Sun, 2015-05-10 19:31 |
1 |
1,798 |
by rmoretti Mon, 2015-05-25 12:30 |
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SymDock with constraints by felipet » Thu, 2015-05-14 09:01 |
1 |
2,569 |
by rmoretti Mon, 2015-05-25 11:49 |
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loop modeling scoring by Nicky_Learning_... » Wed, 2015-05-13 20:00 |
1 |
2,196 |
by rmoretti Mon, 2015-05-25 11:30 |
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Error while reading in silent file by rweisse » Mon, 2015-04-20 00:31 |
4 |
4,375 |
by rmoretti Thu, 2015-04-30 16:46 |
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Failing Fragment libraries us Chemical shifts with Robettaa by kalabharath » Tue, 2015-04-28 19:33 |
2 |
2,138 |
by kalabharath Wed, 2015-04-29 16:21 |
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