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Rosetta 3 - Applications
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Symmetric assembly and output reconstruction by felipet » Wed, 2014-07-02 10:23 |
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1,078 |
by felipet Wed, 2014-07-02 10:23 |
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how to reconstruct the whole complex after symmetric docking by Anonymous » Tue, 2012-07-03 02:44 |
2 |
2,629 |
by felipet Wed, 2014-07-02 07:26 |
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Fastrelax problem by Pernille » Tue, 2014-06-17 08:59 |
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1,634 |
by Pernille Fri, 2014-06-20 00:17 |
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using Rosetta to compute pH dependent binding? by JuliusSu » Sun, 2014-06-15 20:28 |
3 |
3,918 |
by rmoretti Tue, 2014-06-17 08:51 |
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PIKAA in resfile does not mutate Cys in disulfide bond to specified residue by attesor » Fri, 2014-03-14 07:53 |
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2,701 |
by attesor Mon, 2014-06-16 07:34 |
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ProteinLigandInterfaceUpweighter for protein-protein interactions? by ahonegger » Mon, 2014-06-02 06:53 |
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2,538 |
by ahonegger Fri, 2014-06-06 09:31 |
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Positive scores with SymmDock in helical symmetry by kxiao » Tue, 2014-02-11 07:37 |
4 |
3,650 |
by kxiao Thu, 2014-06-05 08:37 |
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Problems with fixbb in Rosetta 3.5 by mdidonato » Wed, 2014-06-04 13:56 |
2 |
2,062 |
by mdidonato Wed, 2014-06-04 14:55 |
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Docking protein complexes when constrained by oligomer symmetry by msk » Tue, 2014-06-03 11:09 |
0 |
1,173 |
by msk Tue, 2014-06-03 11:09 |
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Creating model of 89-90 residues by ab initio methodology-help by krlitros87 » Sun, 2014-05-25 12:12 |
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1,760 |
by rmoretti Mon, 2014-05-26 09:29 |
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ddg_monomer and membrane proteins by afmo » Tue, 2014-05-20 02:37 |
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4,693 |
by afmo Thu, 2014-05-22 01:19 |
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High energies after loopmodel run by michki » Thu, 2014-05-08 05:14 |
3 |
3,155 |
by rmoretti Mon, 2014-05-12 15:16 |
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Ligand docking: ERROR: set_atom_base: atoms must be bonded! by mengzhang » Mon, 2014-05-12 12:36 |
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2,156 |
by rmoretti Mon, 2014-05-12 15:08 |
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Unable to set up interface foldtree because there are no movable jumps - (antibody/antigen docking) by snorp » Mon, 2014-04-14 13:01 |
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3,178 |
by jadolfbr Mon, 2014-05-12 10:41 |
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How do I explicitly add residues for design in the interface optimization script? by ahonegger » Mon, 2014-05-12 07:40 |
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2,787 |
by ahonegger Mon, 2014-05-12 09:08 |
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clustering in RosettaRemodel by cheyuk » Wed, 2014-04-23 03:09 |
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3,257 |
by rmoretti Mon, 2014-05-12 08:45 |
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Connecting linkers by Prasanth Kumar » Tue, 2014-05-06 00:53 |
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2,489 |
by smlewis Mon, 2014-05-12 08:32 |
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ambiguous constraints by shrutikhare » Mon, 2014-05-12 04:42 |
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2,775 |
by rmoretti Mon, 2014-05-12 08:25 |
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Scoring residue vs. organic ligand by almeida » Tue, 2014-04-08 12:18 |
12 |
11,227 |
by rmoretti Thu, 2014-04-24 14:43 |
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extract silent error - tag mismatch by shrutikhare » Thu, 2014-04-03 00:13 |
5 |
5,698 |
by rmoretti Mon, 2014-04-21 10:47 |
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Cannot get a negative score after relax by kxiao » Tue, 2014-01-28 22:28 |
6 |
6,456 |
by rmoretti Mon, 2014-04-21 06:48 |
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minirosetta: weird behavior by fred » Wed, 2014-01-22 05:57 |
4 |
4,208 |
by fred Mon, 2014-04-21 06:48 |
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fixbb with symmetry error by Prasanth Kumar » Sun, 2014-01-26 10:56 |
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4,508 |
by Prasanth Kumar Mon, 2014-04-21 06:48 |
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do mpi apps share memory? by fred » Thu, 2014-01-23 11:49 |
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2,709 |
by fred Mon, 2014-04-21 06:48 |
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Abinito for Multimers by Prasanth Kumar » Wed, 2014-01-22 17:45 |
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2,766 |
by Prasanth Kumar Mon, 2014-04-21 06:48 |
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the flexpepdock refinement and ab-initio by tfliu » Mon, 2013-12-23 19:17 |
6 |
5,145 |
by tfliu Mon, 2014-04-21 06:48 |
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rosetta's keyword list by fred » Tue, 2014-01-21 06:03 |
1 |
2,266 |
by rmoretti Mon, 2014-04-21 06:48 |
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protein-protein docking with flexible backbone by tim » Fri, 2013-12-20 05:52 |
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3,793 |
by rmoretti Mon, 2014-04-21 06:48 |
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FlexPepDock and total score problem by tkellici » Fri, 2014-01-17 06:07 |
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2,620 |
by Ora Schueler-Furman Mon, 2014-04-21 06:48 |
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Ab-initio modeling on part of the protein by xiayanlawrence » Thu, 2013-12-19 07:45 |
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2,945 |
by rmoretti Mon, 2014-04-21 06:48 |
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assymetric dymer modelling with comparative and ab initio by marcia » Mon, 2013-10-14 08:33 |
3 |
4,048 |
by rmoretti Mon, 2014-04-21 06:48 |
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Symmetric docking with multiple chains as asymmetric unit by sarah29 » Tue, 2013-11-05 20:24 |
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2,714 |
by rmoretti Mon, 2014-04-21 06:48 |
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Symmetry definition for coiled-coil dimer and trimer by kszczepaniak » Fri, 2013-10-11 05:33 |
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5,022 |
by kszczepaniak Mon, 2014-04-21 06:48 |
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Problem about energy score by tfliu » Tue, 2013-11-05 02:09 |
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6,245 |
by Ora Schueler-Furman Mon, 2014-04-21 06:48 |
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profit program in antibody design by tzhou » Tue, 2013-10-15 23:29 |
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2,342 |
by rmoretti Mon, 2014-04-21 06:48 |
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Score - Strange message by Ashafix » Wed, 2013-11-20 15:23 |
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2,891 |
by Ashafix Mon, 2014-04-21 06:48 |
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restrain residues in docking by albumns » Sat, 2013-11-02 08:52 |
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2,158 |
by jadolfbr Mon, 2014-04-21 06:48 |
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MaxSub and MaxSub2.0 by JadAbbass » Tue, 2013-10-15 13:36 |
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2,928 |
by JadAbbass Mon, 2014-04-21 06:48 |
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Make Fragments by Run » Mon, 2013-11-11 05:31 |
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2,207 |
by smlewis Mon, 2014-04-21 06:48 |
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symmetrical membrane modeling by rlwoltz » Tue, 2013-10-29 03:41 |
5 |
4,900 |
by jadolfbr Mon, 2014-04-21 06:48 |
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Problem with SymmDock in helical symmetry by mumdonar » Wed, 2013-09-18 03:59 |
2 |
3,241 |
by mumdonar Mon, 2014-04-21 06:48 |
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submit_NGK.py not creating output files by nkato2 » Wed, 2013-08-28 23:37 |
1 |
2,086 |
by rmoretti Mon, 2014-04-21 06:48 |
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rosetta.script segmentation fault by felipet » Wed, 2013-10-02 10:41 |
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5,038 |
by jadolfbr Mon, 2014-04-21 06:48 |
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RosettaRemodel can not work now? by myputer » Tue, 2013-08-13 16:56 |
7 |
6,100 |
by rmoretti Mon, 2014-04-21 06:48 |
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About scorefunction. by Run » Mon, 2013-09-09 23:08 |
7 |
5,989 |
by rmoretti Mon, 2014-04-21 06:48 |
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Comparative modeling by MRH » Mon, 2013-08-19 23:08 |
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2,028 |
by smlewis Mon, 2014-04-21 06:48 |
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Loop modelling before peptide docking by wsgosal » Tue, 2013-10-01 07:24 |
4 |
4,362 |
by wsgosal Mon, 2014-04-21 06:48 |
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Error with FlexPepDock by aloshbau » Sat, 2013-08-10 11:51 |
1 |
2,150 |
by rmoretti Mon, 2014-04-21 06:48 |
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homology membrane modeling demo in rosetta 3.5 by rlwoltz » Mon, 2013-09-09 10:26 |
1 |
2,441 |
by smlewis Mon, 2014-04-21 06:48 |
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Full Protocol by shekhar » Fri, 2013-10-04 01:07 |
1 |
2,562 |
by rmoretti Mon, 2014-04-21 06:48 |
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usage of score3 by Run » Sat, 2013-09-28 02:06 |
16 |
13,987 |
by jadolfbr Mon, 2014-04-21 06:48 |
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comparative modeling of protein-ligand complex by tevang » Mon, 2013-09-09 09:06 |
3 |
3,554 |
by rmoretti Mon, 2014-04-21 06:48 |
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Ligand atom RMSD calculation by lkrathn » Wed, 2013-08-14 21:25 |
2 |
4,023 |
by lkrathn Mon, 2014-04-21 06:48 |
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Loop prediction by yzhou » Thu, 2013-07-18 14:24 |
3 |
3,538 |
by jadolfbr Mon, 2014-04-21 06:48 |
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Unsatisfied interface H-bond in Ligand docking by Prasanth Kumar » Thu, 2013-07-18 12:04 |
1 |
3,554 |
by rmoretti Mon, 2014-04-21 06:48 |
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Error while running RosettaLigand by Ryhon Wang » Tue, 2013-07-30 02:51 |
4 |
4,222 |
by Ryhon Wang Mon, 2014-04-21 06:48 |
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Ligand creation by Prasanth Kumar » Fri, 2013-08-02 09:48 |
1 |
2,024 |
by rmoretti Mon, 2014-04-21 06:48 |
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A problem with RosettaLigand by Rosettasz » Fri, 2013-07-19 16:09 |
16 |
15,451 |
by Rosettasz Mon, 2014-04-21 06:48 |
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high-res docking by tfliu » Mon, 2013-07-15 02:49 |
2 |
2,685 |
by tfliu Mon, 2014-04-21 06:48 |
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Binding energy contribution broken down by residue by brspurri » Tue, 2013-07-23 12:47 |
1 |
2,332 |
by rmoretti Mon, 2014-04-21 06:48 |
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docking energies - deltadeltaG calculation by ast » Fri, 2013-07-19 07:30 |
5 |
8,352 |
by rmoretti Mon, 2014-04-21 06:48 |
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Alanine Scanning by gjbartlett » Mon, 2013-08-05 07:02 |
1 |
3,009 |
by rmoretti Mon, 2014-04-21 06:48 |
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creating a model using a base pdb and extending a chain by rlwoltz » Fri, 2013-07-12 15:35 |
1 |
2,224 |
by nawsad Mon, 2014-04-21 06:48 |
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About loophash and batchrelax. by Run » Mon, 2013-07-22 23:54 |
14 |
10,372 |
by Run Mon, 2014-04-21 06:48 |
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strange effect in: SymDock.linuxgccrelease by ast » Tue, 2013-06-11 11:05 |
3 |
3,095 |
by ast Mon, 2014-04-21 06:48 |
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trouble in floppytail modelling by ytao » Thu, 2013-06-27 13:15 |
1 |
2,003 |
by ytao Mon, 2014-04-21 06:48 |
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select_best_unique_ligand_poses output by ast » Thu, 2013-07-11 02:33 |
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2,707 |
by ast Mon, 2014-04-21 06:48 |
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interface_delta ligand_docking by Prasanth Kumar » Tue, 2013-06-18 08:37 |
1 |
2,146 |
by rmoretti Mon, 2014-04-21 06:48 |
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membrane modeling error by benniu2004 » Mon, 2013-07-01 17:59 |
1 |
2,051 |
by smlewis Mon, 2014-04-21 06:48 |
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Why is proline hydroxylated？ by kwonglynn » Tue, 2013-06-25 02:38 |
3 |
4,384 |
by rmoretti Mon, 2014-04-21 06:48 |
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pdb2vall by JadAbbass » Mon, 2013-07-08 12:11 |
3 |
3,167 |
by rmoretti Mon, 2014-04-21 06:48 |
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SymDock for docking only the ligand? by ast » Mon, 2013-06-17 09:53 |
4 |
4,433 |
by rmoretti Mon, 2014-04-21 06:48 |
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Protein-DNA Docking using RosettaScripts? by brspurri » Fri, 2013-06-07 09:06 |
1 |
3,874 |
by rmoretti Mon, 2014-04-21 06:48 |
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printing our per-residue energies including H-bonding energies by vijayan » Tue, 2013-07-02 08:51 |
2 |
3,156 |
by rmoretti Mon, 2014-04-21 06:48 |
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A question on the logic of enzyme design by agulsevin » Thu, 2013-06-13 08:10 |
2 |
3,329 |
by agulsevin Mon, 2014-04-21 06:48 |
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CSrosetta run problem by erin_cutts » Fri, 2013-06-28 09:52 |
2 |
3,080 |
by erin_cutts Mon, 2014-04-21 06:48 |
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Add missing residues in loop modeling by exchhattu » Thu, 2013-06-20 17:38 |
1 |
3,080 |
by smlewis Mon, 2014-04-21 06:48 |
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Discrepancy between the total pose energy and sum of per residue energies by vijayan » Tue, 2013-07-02 07:24 |
3 |
3,684 |
by rmoretti Mon, 2014-04-21 06:48 |
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ligand_docking_analysis by Prasanth Kumar » Thu, 2013-05-09 23:51 |
4 |
4,158 |
by rmoretti Mon, 2014-04-21 06:47 |
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No interface for protein - Interface Analyzer by aloshbau » Tue, 2013-05-21 21:00 |
1 |
2,356 |
by jarod Mon, 2014-04-21 06:47 |
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score and relax by Prasanth Kumar » Thu, 2013-05-02 05:09 |
1 |
2,802 |
by jadolfbr Mon, 2014-04-21 06:47 |
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modeling 4 linkers between 2 domains by pdbb » Thu, 2013-05-16 08:23 |
1 |
1,983 |
by smlewis Mon, 2014-04-21 06:47 |
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Problems with always_constrained_relax_script by wsgosal » Wed, 2013-05-29 04:39 |
3 |
3,990 |
by rmoretti Mon, 2014-04-21 06:47 |
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contents of span file by tevang » Mon, 2013-04-15 05:01 |
1 |
2,121 |
by smlewis Mon, 2014-04-21 06:47 |
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Relax with protein+complex by Prasanth Kumar » Wed, 2013-05-08 23:16 |
4 |
4,540 |
by Prasanth Kumar Mon, 2014-04-21 06:47 |
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Problems with ligand when running RosettaLigand by Cat » Mon, 2013-05-20 15:58 |
5 |
5,168 |
by jadolfbr Mon, 2014-04-21 06:47 |
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Error when running cluster by aloshbau » Wed, 2013-05-01 20:45 |
3 |
3,765 |
by rmoretti Mon, 2014-04-21 06:47 |
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deltaG calculations by Prasanth Kumar » Wed, 2013-05-15 07:06 |
3 |
5,293 |
by rmoretti Mon, 2014-04-21 06:47 |
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ddG filter gives deltaG calculation number? by jarod » Tue, 2013-05-28 23:43 |
2 |
3,227 |
by jarod Mon, 2014-04-21 06:47 |
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number of structures in homology modeling for cluster analysis by pdbb » Fri, 2013-04-12 08:52 |
1 |
2,196 |
by smlewis Mon, 2014-04-21 06:47 |
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docking with constraints by talavera » Tue, 2013-05-07 01:50 |
1 |
3,522 |
by rmoretti Mon, 2014-04-21 06:47 |
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mover "RepackMinimize" does not support chains > 2? by jarod » Mon, 2013-05-20 02:17 |
6 |
6,160 |
by jarod Mon, 2014-04-21 06:47 |
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Problems when running Rosetta VIP with cofactors by Basantab » Fri, 2013-04-26 13:31 |
14 |
12,298 |
by Basantab Mon, 2014-04-21 06:47 |
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Modeling flexible linkers with Floppytail by pdbb » Sun, 2013-05-12 15:55 |
2 |
2,677 |
by smlewis Mon, 2014-04-21 06:47 |
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Pepspec Errors running 3.4 by rrphenix » Tue, 2013-05-28 12:08 |
4 |
3,463 |
by rmoretti Mon, 2014-04-21 06:47 |
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make_rot_lib issue by jarek » Thu, 2013-04-11 08:21 |
4 |
4,022 |
by smlewis Mon, 2014-04-21 06:47 |
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in silico affinity maturation design by jarod » Mon, 2013-05-20 02:07 |
11 |
10,202 |
by jarod Mon, 2014-04-21 06:47 |
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PDB format for RosettaDNA by brspurri » Thu, 2013-05-30 11:21 |
5 |
5,406 |
by brspurri Mon, 2014-04-21 06:47 |
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Error when running Remodel with EnzDes constraint file by aloshbau » Wed, 2013-04-17 22:23 |
2 |
3,342 |
by aloshbau Mon, 2014-04-21 06:47 |
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comparative modelling and broker by felipet » Tue, 2013-02-05 08:33 |
4 |
3,408 |
by smlewis Mon, 2014-04-21 06:47 |
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