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Sticky topic Sticky: FAQ
by admin » Mon, 2010-08-30 04:16
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7,738 by admin
Fri, 2015-09-04 16:17
Normal topic Error in rosetta_scripts.mpi.linuxgccrelease: double free or corruption (!prev): 0x0000000007697a90
by almeida85 » Thu, 2022-11-17 01:04
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422 by almeida85
Thu, 2022-11-17 01:04
Normal topic Suggestions for email notification & "category" for post
by lanselibai » Sun, 2014-11-16 10:44
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1,465 by lanselibai
Sun, 2014-11-16 10:44
Normal topic alignblast.pl truncated file
by rlwoltz » Mon, 2019-03-11 18:32
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1,085 by rlwoltz
Mon, 2019-03-11 18:32
Normal topic reading of AtomPair failed in relax with constraint
by hajar » Wed, 2020-06-10 10:02
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1,229 by hajar
Wed, 2020-06-10 11:17
Normal topic Porblem with Rosetta Homology Modelling
by Karthik » Wed, 2022-07-13 23:45
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429 by Karthik
Wed, 2022-07-13 23:45
Normal topic Problem with sugar parameters
by Martin Floor » Sat, 2023-10-07 10:17
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328 by Martin Floor
Sat, 2023-10-07 10:17
Normal topic shockingly low fragment diversity ___nnmake failed
by anusmita_sahoo » Wed, 2010-03-10 21:15
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1,453 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic How to create a native file for Protein-Protein docking
by Kotimedidhi » Mon, 2020-06-22 08:10
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784 by Kotimedidhi
Mon, 2020-06-22 08:10
Normal topic Methodology Feedback with As(III) and Pb(II) Binding
by rnogy » Mon, 2023-11-06 17:05
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85 by rnogy
Mon, 2023-11-06 17:06
Normal topic Rosetta and design of ligand binding site
by rohi » Mon, 2021-03-15 06:00
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877 by rohi
Mon, 2021-03-15 06:31
Normal topic How many rifdock can I run at a time on a 64 CPUs and 512GB memory server?
by JasonIsaac » Tue, 2023-05-02 03:39
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232 by JasonIsaac
Tue, 2023-05-02 03:39
Normal topic Unexpected length of light chain FR1
by mgupta » Fri, 2022-12-09 01:03
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517 by mgupta
Fri, 2022-12-09 01:03
Normal topic Scoring Centroid Structures
by Trentage » Sun, 2010-03-28 19:21
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1,857 by Trentage
Mon, 2014-04-21 06:47
Normal topic Make fragments
by jeanramos » Mon, 2020-07-13 00:56
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763 by jeanramos
Mon, 2020-07-13 00:56
Normal topic Denovo density excess map input and segmentation
by ahmadkhalifa » Mon, 2018-04-30 07:28
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969 by ahmadkhalifa
Fri, 2018-05-04 07:50
Normal topic Compile C++ Rosetta to Pyrosetta ERROR
by michelleqyh » Fri, 2020-08-21 09:00
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810 by michelleqyh
Fri, 2020-08-21 09:00
Normal topic Error with filter in rosseta_scripts
by Osmany Guirola » Mon, 2020-05-11 04:52
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854 by Osmany Guirola
Mon, 2020-05-11 04:52
Normal topic Scoring correlation with electron density map
by mrosam » Thu, 2023-05-25 05:14
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232 by mrosam
Thu, 2023-05-25 05:14
Normal topic Webinar?
by IgaK » Thu, 2009-11-19 03:26
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1,478 by IgaK
Mon, 2014-04-21 06:47
Normal topic Global ligand docking with Rosetta script and PyRosetta
by tisozaki » Tue, 2021-12-14 17:16
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656 by tisozaki
Tue, 2021-12-14 17:16
Normal topic Errors in Interface_design_demo
by zhoubin » Fri, 2019-01-04 13:14
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1,102 by zhoubin
Fri, 2019-01-04 13:14
Normal topic Side-chain grafting in fixed scaffold
by Kazu » Wed, 2020-05-20 08:45
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932 by Kazu
Wed, 2020-05-20 11:58
Normal topic Structure refinement for helical assembles using Rosetta
by xiaoyanzi » Thu, 2020-06-18 00:34
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875 by xiaoyanzi
Thu, 2020-06-18 00:36
Normal topic ddG of multiple mutations on a monomer
by hltorresvera » Mon, 2021-02-01 16:54
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1,745 by hltorresvera
Tue, 2021-02-09 10:44
Normal topic Which application/mover should I use to evaluate the ddg between apo enzyme and enzyme binding with transition state?
by JasonIsaac » Wed, 2023-02-22 18:36
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355 by JasonIsaac
Wed, 2023-02-22 18:36
Normal topic possible error in make_fragments.pl and fix
by DanielK » Fri, 2012-04-27 02:21
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1,561 by DanielK
Mon, 2014-04-21 06:47
Normal topic What is the expected behaviour when minimizing a jump edge?
by bio_james » Wed, 2017-12-13 09:13
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1,064 by bio_james
Wed, 2017-12-13 09:13
Normal topic env energy term
by bazzoli » Wed, 2018-10-10 01:59
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1,047 by bazzoli
Wed, 2018-10-10 01:59
Normal topic Question about remodelling
by tonycheng1688 » Mon, 2022-04-25 13:51
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461 by tonycheng1688
Mon, 2022-04-25 13:51
Normal topic how to generate _prepro.rama file for a customized beta-amino acid residues?
by wwwmrzkwww » Sun, 2023-04-23 14:25
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235 by wwwmrzkwww
Sun, 2023-04-23 14:25
Normal topic Unrecognized atom parameter with denovo_density
by kalabharath » Mon, 2020-06-29 06:59
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875 by kalabharath
Mon, 2020-06-29 06:59
Normal topic Obtain score during prediction
by CameronJA » Mon, 2021-06-14 16:12
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656 by CameronJA
Mon, 2021-06-14 16:12
Normal topic How to use the <CavityVolume> filter in the released version of Rosetta
by BioPython » Sun, 2019-05-12 20:07
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1,008 by BioPython
Sun, 2019-05-12 20:07
Normal topic Quick mysql output question
by pedro.guillem » Thu, 2020-07-23 03:45
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753 by pedro.guillem
Thu, 2020-07-23 03:45
Normal topic Mutate multidomain protein
by frankfurter1 » Wed, 2018-05-09 04:40
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1,039 by frankfurter1
Wed, 2018-05-09 04:40
Normal topic Output "per-residue" energy score to database
by pedro.guillem » Thu, 2020-05-14 04:22
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786 by pedro.guillem
Thu, 2020-05-14 04:22
Normal topic protein binder interface design error
by guowuchen » Thu, 2022-06-23 04:43
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536 by guowuchen
Thu, 2022-06-23 04:43
Normal topic running ROBETTA protocol for proteins >1000 aa long
by tevang » Thu, 2010-07-15 07:09
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1,513 by tevang
Mon, 2014-04-21 06:47
Normal topic Design strategy - One chain at a time OR two chains together?
by tlopes » Wed, 2022-01-05 18:19
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553 by tlopes
Wed, 2022-01-05 18:19
Normal topic solution of the length of peptide candidates is larger than substrate with FlexPepDock and Flexpepbind
by ziqi1234 » Thu, 2018-05-24 02:18
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1,179 by ziqi1234
Thu, 2018-05-24 02:18
Normal topic Disulfidize mover
by karenjgonzalez » Wed, 2019-07-31 12:35
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1,138 by karenjgonzalez
Wed, 2019-07-31 12:35
Normal topic Difference between interface_delta_X and dG_separated?
by Nicole Deng » Sat, 2020-06-06 06:31
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1,049 by Nicole Deng
Sat, 2020-06-06 06:40
Normal topic Replacing a single residue in a structure
by Wexter300 » Sat, 2023-09-16 14:23
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367 by Wexter300
Sat, 2023-09-16 14:23
Normal topic pyRosetta problem
by exchhattu » Sun, 2010-07-25 22:25
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1,444 by exchhattu
Mon, 2014-04-21 06:47
Normal topic How to define the surface (???.surf) for surface_docking?
by Anpu » Thu, 2018-09-27 07:34
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974 by Anpu
Thu, 2018-09-27 23:36
Normal topic protein location change during Docking protocol
by Hyun » Tue, 2022-03-29 19:53
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422 by Hyun
Tue, 2022-03-29 19:53
Normal topic protein-protein docking
by LUOD » Thu, 2023-11-02 18:23
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93 by LUOD
Thu, 2023-11-02 18:25
Normal topic crashed when loading RDC data
by yangshen12 » Fri, 2018-10-26 12:34
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1,004 by yangshen12
Fri, 2018-10-26 12:34
Normal topic Any general way to generate .params file for beta and gamma NCAA?
by wwwmrzkwww » Wed, 2023-04-26 12:35
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242 by wwwmrzkwww
Wed, 2023-04-26 12:35
Normal topic how to build homology based models?
by albumns » Thu, 2010-06-24 10:27
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1,450 by albumns
Mon, 2014-04-21 06:47
Normal topic Prepacking crashing using metalloprotein
by mb0261 » Tue, 2022-12-06 10:16
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463 by mb0261
Tue, 2022-12-06 10:16
Normal topic Changing amino acid profile while keeping the backbone conformation between 2 protein structures (need help)
by seamoon » Wed, 2023-05-24 07:46
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226 by seamoon
Wed, 2023-05-24 07:46
Normal topic Rosetta membrane prediction!
by wtscrystal » Tue, 2009-11-17 05:55
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2,302 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic Error on rna_denovo_setup.py
by zahra_AZ » Mon, 2020-11-09 02:23
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939 by zahra_AZ
Mon, 2020-11-09 02:23
Normal topic sam.predict-2nd for make_fragments.pl script
by sumukh21 » Tue, 2011-02-22 17:40
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1,524 by sumukh21
Mon, 2014-04-21 06:47
Normal topic Problem running make_fragments.pl script
by anirbanzz » Thu, 2010-04-22 01:27
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1,753 by anirbanzz
Mon, 2014-04-21 06:47
Normal topic RosettaDesign improvements
by ac.research » Mon, 2018-05-14 08:27
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1,047 by ac.research
Mon, 2018-05-14 08:27
Normal topic [dev] examples for implementing setup_for_packing, prepare_rotamers_for_packing?
by ipetrik_ambry » Mon, 2017-10-30 17:03
0
1,041 by ipetrik_ambry
Mon, 2017-10-30 17:03
Normal topic Error in H3_modeling_scores.fasc file from antibody_H3 program
by Brian Wiley » Sat, 2023-02-04 23:41
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290 by Brian Wiley
Sat, 2023-02-04 23:43
Normal topic How to generate a symmetry definition file for octahedral symmetry?
by Anonymous » Wed, 2012-08-15 05:20
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2,424 by Anonymous
Mon, 2014-04-21 06:47
Normal topic Enzyme design gets 0 hit
by cryosky » Sun, 2021-09-26 13:24
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721 by cryosky
Sun, 2021-09-26 13:24
Normal topic Rosetta remodelling - how to change the added residue type instead of just VAL
by xuezhi » Wed, 2023-02-15 14:00
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299 by xuezhi
Wed, 2023-02-15 14:00
Normal topic Remodel and the depracated EMPTY NC
by matteoferla » Fri, 2021-02-26 07:12
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970 by matteoferla
Fri, 2021-02-26 07:12
Normal topic Loop modeling
by Robertofg » Tue, 2022-11-22 00:34
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449 by Robertofg
Tue, 2022-11-22 00:34
Normal topic Running CstFileToTheozyme for Mono-Atomic Metal
by Jhreed » Fri, 2016-07-08 13:43
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1,218 by Jhreed
Fri, 2016-07-08 13:44
Normal topic Interface scores comparison
by NingNing » Tue, 2022-08-09 17:36
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402 by NingNing
Tue, 2022-08-09 17:36
Normal topic Correct way to force a specific histidine tautomer
by matteoferla » Fri, 2020-04-10 02:40
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1,154 by matteoferla
Fri, 2020-04-10 02:40
Normal topic Error when using rna_denovo in TACC stampede2 HPC
by lsong2 » Thu, 2021-11-18 10:31
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600 by lsong2
Thu, 2021-11-18 10:31
Normal topic I made a params file generation webpage
by matteoferla » Wed, 2020-07-22 03:08
0
835 by matteoferla
Wed, 2020-07-22 03:08
Normal topic restrict PackRotamersMover
by pmit » Thu, 2018-05-03 01:48
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965 by pmit
Thu, 2018-05-03 01:48
Normal topic Error: Element 'RandomizeBBByRamaPrePro': This element is not expected.
by nferruz » Fri, 2020-08-28 06:04
0
854 by nferruz
Fri, 2020-08-28 06:05
Normal topic GeneralizedKIC side chain closure.
by almeida85 » Mon, 2022-09-19 06:13
0
444 by almeida85
Mon, 2022-09-19 07:22
Normal topic BUG REPORT: MySql column protocol.protocol_id must have the AUTO_INCREMENT flag set
by pedro.guillem » Wed, 2020-05-13 18:31
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835 by pedro.guillem
Wed, 2020-06-24 04:42
Normal topic Questions about gen_apo_grids
by JasonIsaac » Sat, 2023-06-17 00:20
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215 by JasonIsaac
Sat, 2023-06-17 00:20
Normal topic Ab Initio folding of protein with multiple chains?
by myang » Tue, 2009-11-24 13:01
0
1,562 by myang
Mon, 2014-04-21 06:47
Normal topic Helical symmetry for cryo-EM refinement
by fmerino » Mon, 2017-10-16 04:02
0
1,336 by fmerino
Mon, 2017-10-16 04:02
Normal topic mpi_MSD for antibody design
by hanzhiz » Thu, 2021-12-16 09:32
0
608 by hanzhiz
Thu, 2021-12-16 09:32
Normal topic Error in Loop Modeling
by sayan500 » Tue, 2019-07-30 22:20
0
1,412 by sayan500
Tue, 2019-07-30 22:20
Normal topic make_fragments.pl
by rlwoltz » Fri, 2019-02-01 10:31
0
1,475 by rlwoltz
Fri, 2019-02-01 10:31
Normal topic Using NCAA
by ate » Sat, 2021-05-01 02:52
0
891 by ate
Sat, 2021-05-01 02:52
Normal topic keep ATP in the kinase-peptide structure while docking
by ziqi1234 » Fri, 2017-11-10 04:04
0
1,060 by ziqi1234
Fri, 2017-11-10 04:04
Normal topic Segmentation fault with nstruct > 1
by Brian Wiley » Sun, 2023-02-12 20:46
0
316 by Brian Wiley
Sun, 2023-02-12 20:46
Normal topic Temperature
by mrosam » Mon, 2022-08-08 01:37
0
390 by mrosam
Mon, 2022-08-08 01:37
Normal topic Using FastSAXS Scoring Protocol
by jurkm » Tue, 2011-09-20 07:40
0
1,783 by jurkm
Mon, 2014-04-21 06:47
Normal topic Clustering Poses from RosettaDock
by ctaylor » Tue, 2009-12-29 06:38
0
1,472 by ctaylor
Mon, 2014-04-21 06:47
Normal topic Ensemble file required for both partners with docking prepack protocol
by katherinemccoy » Tue, 2022-03-29 14:26
0
451 by katherinemccoy
Tue, 2022-03-29 14:26
Normal topic possible error in make_fragments.pl and fix
by DanielK » Fri, 2012-04-27 02:23
0
1,635 by DanielK
Mon, 2014-04-21 06:47
Normal topic SARS-CoV-2: call for compound predictions against protease
by matteoferla » Sun, 2020-03-22 05:29
0
944 by matteoferla
Sun, 2020-03-22 05:29
Normal topic using full atom constraint in docking
by rohi » Thu, 2020-10-15 10:28
0
952 by rohi
Thu, 2020-10-15 10:28
Normal topic What should I do to lower down the fa_sol scores?
by JasonIsaac » Mon, 2022-12-05 18:57
0
465 by JasonIsaac
Mon, 2022-12-05 18:57
Normal topic Questions about alanine scanning in Rosetta
by LTJ » Mon, 2020-07-06 14:13
0
964 by LTJ
Mon, 2020-07-06 14:13
Normal topic Flex-pep-docking (ab-initio mode)
by ate » Wed, 2021-06-16 19:19
0
666 by ate
Wed, 2021-06-16 19:19
Normal topic ligand docking error
by YuFei » Wed, 2020-04-22 17:27
0
871 by YuFei
Wed, 2020-04-22 17:27
Normal topic Intel MPI: early exit due to job process stopped.
by jackzzs » Mon, 2023-05-15 02:57
0
715 by jackzzs
Mon, 2023-05-15 03:17
Normal topic Could somebody interpret the rosetta's cluster application result?
by exchhattu » Mon, 2009-11-16 01:58
0
1,634 by exchhattu
Mon, 2014-04-21 06:47
Normal topic Homology modeling starter script
by gobli033 » Thu, 2010-04-01 07:27
0
1,471 by gobli033
Mon, 2014-04-21 06:47
Normal topic To smlewis............parallel job submission
by anusmita_sahoo » Mon, 2010-04-19 22:28
0
1,487 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic How can I use InterfaceScore terms in docking as GenericMonteCarlo criterion
by wwwmrzkwww » Sun, 2021-08-15 00:19
0
746 by wwwmrzkwww
Sun, 2021-08-15 00:19
Normal topic Failure to produce a cst file
by biotech » Wed, 2022-10-26 11:17
0
397 by biotech
Wed, 2022-10-26 11:17

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