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Sticky topic Sticky: FAQ
by admin » Mon, 2010-08-30 04:16
0
7,028 by admin
Fri, 2015-09-04 16:17
Normal topic Rosetta for design of artifical metalloenzyme
by Delfosse57 » Thu, 2022-05-19 21:47
0
12 by Delfosse57
Thu, 2022-05-19 21:47
Normal topic RNA update library
by Anne Klein » Mon, 2022-05-16 16:04
1
25 by rmoretti
Tue, 2022-05-17 08:06
Normal topic rosetta scripts to superimpose multiple segments
by rlwoltz » Fri, 2022-04-29 15:15
0
40 by rlwoltz
Fri, 2022-04-29 15:15
Normal topic RifGen error on rosetta, "assertion failed", please help!
by guowuchen » Thu, 2022-05-05 06:20
0
47 by guowuchen
Thu, 2022-05-05 06:20
Normal topic -ignore_unrecognized_res doesn't work
by e3lm » Fri, 2022-05-06 14:47
2
63 by e3lm
Fri, 2022-05-06 16:10
Normal topic protein location change during Docking protocol
by Hyun » Tue, 2022-03-29 19:53
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63 by Hyun
Tue, 2022-03-29 19:53
Normal topic Question about remodelling
by tonycheng1688 » Mon, 2022-04-25 13:51
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64 by tonycheng1688
Mon, 2022-04-25 13:51
Normal topic Ensemble file required for both partners with docking prepack protocol
by katherinemccoy » Tue, 2022-03-29 14:26
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64 by katherinemccoy
Tue, 2022-03-29 14:26
Normal topic Residue outside res_map range
by amcallister » Fri, 2022-04-22 11:26
0
69 by amcallister
Fri, 2022-04-22 11:26
Normal topic Error: Start tag expected, '<' not found
by Isomerase » Wed, 2022-04-06 19:45
1
77 by rmoretti
Thu, 2022-04-07 07:51
Normal topic AddMembrane Mover Segmentation Fault
by csvajda » Thu, 2022-04-14 14:02
0
83 by csvajda
Thu, 2022-04-14 14:02
Normal topic InterfaceDdGMover and ResfileReader
by asaf.farhi » Wed, 2022-04-13 15:05
0
86 by asaf.farhi
Wed, 2022-04-13 15:05
Normal topic score against rmsd plot of designs
by LanMei » Mon, 2022-03-21 22:46
2
136 by LanMei
Tue, 2022-03-22 20:45
Normal topic abinitio demo is not progressing - new install
by jtpi6174 » Thu, 2022-03-24 03:49
2
148 by jtpi6174
Thu, 2022-03-24 09:43
Normal topic Weekly releases for commercial users?
by rjacak » Tue, 2022-03-22 07:48
2
152 by rjacak
Thu, 2022-03-31 10:53
Normal topic RifDock building error on Ubuntu 20.04,please help!
by guowuchen » Mon, 2022-03-28 03:53
2
189 by guowuchen
Wed, 2022-03-30 04:20
Normal topic mpi_MSD for antibody design
by hanzhiz » Thu, 2021-12-16 09:32
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193 by hanzhiz
Thu, 2021-12-16 09:32
Normal topic Design strategy - One chain at a time OR two chains together?
by tlopes » Wed, 2022-01-05 18:19
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196 by tlopes
Wed, 2022-01-05 18:19
Normal topic SnugDock or RosettaDock for HDX-MS data
by hanzhiz » Thu, 2021-12-16 09:18
0
198 by hanzhiz
Thu, 2021-12-16 09:18
Normal topic Global ligand docking with Rosetta script and PyRosetta
by tisozaki » Tue, 2021-12-14 17:16
0
199 by tisozaki
Tue, 2021-12-14 17:16
Normal topic Rosetta-foldtree and docking
by tingting » Tue, 2022-03-15 22:49
3
204 by rmoretti
Thu, 2022-03-17 08:30
Normal topic Differentiable Energy Function w/ Centroid Representation
by protein_fan » Sun, 2022-03-20 09:39
4
207 by protein_fan
Fri, 2022-04-15 17:41
Normal topic Inconsistent scoring by "aa_composition" term
by chenna » Thu, 2022-02-24 03:00
1
209 by vmulligan
Thu, 2022-03-03 18:48
Normal topic Help with file in article Kemp elimination catalysts by computational enzyme design
by Wenithor » Sat, 2021-10-09 07:23
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231 by Wenithor
Sat, 2021-10-09 07:23
Normal topic Error when using rna_denovo in TACC stampede2 HPC
by lsong2 » Thu, 2021-11-18 10:31
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240 by lsong2
Thu, 2021-11-18 10:31
Normal topic Cannot Open Resfile
by csvajda » Fri, 2022-03-04 13:39
3
252 by csvajda
Mon, 2022-03-07 07:46
Normal topic I_sc
by Soler » Sat, 2022-02-12 00:16
1
257 by rmoretti
Fri, 2022-02-18 11:14
Normal topic RMSD filter
by Soler » Sat, 2022-01-15 22:09
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269 by Soler
Sat, 2022-01-15 22:09
Normal topic Docking mover
by Soler » Sat, 2022-02-12 20:48
1
277 by jadolfbr
Sat, 2022-02-12 23:16
Normal topic connecting pdb files
by Hyun » Wed, 2021-11-17 22:32
1
284 by ajasja
Thu, 2021-11-18 00:33
Normal topic SecundaryStructure Filter
by Soler » Sat, 2021-11-20 23:41
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303 by Soler
Sat, 2021-11-20 23:41
Normal topic Cterm_amidation
by G Mustafa » Wed, 2021-11-03 08:52
1
320 by gezmi
Sat, 2021-11-06 15:26
Normal topic enzyme design and scoring function
by rohi » Fri, 2021-06-25 10:29
0
323 by rohi
Fri, 2021-06-25 10:29
Normal topic Obtaining all PDB IDs containing similar binding sites for a specific ligand
by Antonia » Wed, 2021-06-16 12:30
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326 by Antonia
Wed, 2021-06-16 12:30
Normal topic Obtain score during prediction
by CameronJA » Mon, 2021-06-14 16:12
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326 by CameronJA
Mon, 2021-06-14 16:12
Normal topic Flex-pep-docking (ab-initio mode)
by ate » Wed, 2021-06-16 19:19
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328 by ate
Wed, 2021-06-16 19:19
Normal topic Enzyme design gets 0 hit
by cryosky » Sun, 2021-09-26 13:24
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351 by cryosky
Sun, 2021-09-26 13:24
Normal topic Multi-metric enzyme docking with substrate
by Wang Zhe » Sat, 2021-11-20 04:41
1
353 by matteoferla
Mon, 2021-12-13 02:27
Normal topic Structural Similarity
by Soler » Mon, 2021-11-29 22:02
1
359 by rmoretti
Tue, 2021-11-30 07:41
Normal topic Segmentation fault on antibody structure prediction
by dkesar » Fri, 2021-06-04 19:09
0
365 by dkesar
Fri, 2021-06-04 19:09
Normal topic Rosetta (antibody_designer) performance
by Kihang _Youn » Wed, 2022-03-02 00:48
7
384 by Kihang _Youn
Thu, 2022-03-10 16:30
Normal topic How can I use InterfaceScore terms in docking as GenericMonteCarlo criterion
by wwwmrzkwww » Sun, 2021-08-15 00:19
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396 by wwwmrzkwww
Sun, 2021-08-15 00:19
Normal topic Rosetta Enzyme design cst block raises error
by cryosky » Thu, 2021-09-16 08:47
1
404 by cryosky
Fri, 2021-09-17 22:04
Normal topic How to provide multiple templates for Robetta with RosettaCM option?
by lanselibai » Wed, 2021-06-23 14:06
1
405 by lanselibai
Wed, 2021-06-23 14:53
Normal topic How to export high energy state pdb out of backrub?
by whiteqiu » Mon, 2021-03-01 18:32
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408 by whiteqiu
Mon, 2021-03-01 18:32
Normal topic parameter file of GLU protonated (GLU_P1.params)
by rohi » Sat, 2021-06-05 20:44
1
417 by nannemdp
Sun, 2021-06-06 09:26
Normal topic Meaning of Metalbinding_constraint
by Corvin » Wed, 2021-05-19 07:54
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434 by Corvin
Wed, 2021-05-19 07:54
Normal topic rna_denovo secstruct_general function
by rvandamme » Mon, 2021-02-01 13:39
0
438 by rvandamme
Mon, 2021-02-01 13:39
Normal topic Blast error for rosetta antibody: No argument value given for Query file
by dngusdnr1 » Tue, 2021-06-08 17:32
1
440 by taylorjones
Wed, 2021-06-09 16:30
Normal topic Help deciphering an input
by Elijah_Hix » Wed, 2021-09-22 11:12
2
443 by Elijah_Hix
Thu, 2021-09-23 10:13
Normal topic Quick mysql output question
by pedro.guillem » Thu, 2020-07-23 03:45
0
451 by pedro.guillem
Thu, 2020-07-23 03:45
Normal topic ligand docking
by hong wei » Thu, 2021-11-18 05:01
2
465 by hong wei
Thu, 2021-11-25 02:46
Normal topic calcium metal nomenclature: Rosetta_cm confusing HETATM CA (calcium) with ATOM CA (alpha-carbon)
by rlwoltz » Tue, 2021-08-03 23:26
0
466 by rlwoltz
Tue, 2021-08-03 23:26
Normal topic ab initio structure modeling
by pci112 » Mon, 2021-04-12 08:07
0
472 by pci112
Mon, 2021-04-12 08:12
Normal topic Rosetta and design of ligand binding site
by rohi » Mon, 2021-03-15 06:00
0
480 by rohi
Mon, 2021-03-15 06:31
Normal topic ref2015: approx. kcal/mol or actually kJ/mol?
by matteoferla » Thu, 2021-10-07 04:04
2
482 by matteoferla
Thu, 2021-10-07 09:31
Normal topic Make fragments
by jeanramos » Mon, 2020-07-13 00:56
0
485 by jeanramos
Mon, 2020-07-13 00:56
Normal topic Internal error while running AbinitioRelax
by Subhrodeep Saha » Sun, 2021-06-13 03:44
1
485 by rmoretti
Wed, 2021-06-23 02:17
Normal topic Using NCAA
by ate » Sat, 2021-05-01 02:22
0
487 by ate
Sat, 2021-05-01 02:22
Normal topic How to create a native file for Protein-Protein docking
by Kotimedidhi » Mon, 2020-06-22 08:10
0
487 by Kotimedidhi
Mon, 2020-06-22 08:10
Normal topic Output "per-residue" energy score to database
by pedro.guillem » Thu, 2020-05-14 04:22
0
487 by pedro.guillem
Thu, 2020-05-14 04:22
Normal topic the question about ddg of disulfide bond mutants
by asbelx » Sun, 2021-08-29 06:40
1
492 by asbelx
Wed, 2021-09-08 23:19
Normal topic Remodel and the depracated EMPTY NC
by matteoferla » Fri, 2021-02-26 07:12
0
493 by matteoferla
Fri, 2021-02-26 07:12
Normal topic Comparatively modelled chains are far apart in final structure while the template pdb has all chains in a close-knit complex
by Sunidhi » Sun, 2020-11-01 11:00
0
501 by Sunidhi
Sun, 2020-11-01 11:01
Normal topic Differences between energy values reported in the tutorials and the ones obtained by running the code, what is normal?
by ericlang » Mon, 2021-07-05 05:43
2
501 by ericlang
Mon, 2021-07-05 06:59
Normal topic RosettaCM: "Ligands must be added to all templates"
by lanselibai » Tue, 2021-06-22 10:42
2
503 by lanselibai
Wed, 2021-06-23 13:21
Normal topic RosettaCM: threading okay, but hybridize loses many secondary structure
by lanselibai » Wed, 2021-06-23 13:51
2
505 by lanselibai
Thu, 2021-06-24 10:16
Normal topic Finding affinity-reducing mutants towards a ligand in Ligand-based interface design protocol
by adityapadhi » Wed, 2020-06-24 01:29
0
506 by adityapadhi
Wed, 2020-06-24 01:29
Normal topic BUG REPORT: MySql column protocol.protocol_id must have the AUTO_INCREMENT flag set
by pedro.guillem » Wed, 2020-05-13 18:31
0
507 by pedro.guillem
Wed, 2020-06-24 04:42
Normal topic Clustering error - Help, please
by karolcia1010 » Wed, 2020-06-17 11:19
0
512 by karolcia1010
Wed, 2020-06-17 11:19
Normal topic Scoring in Rosetta
by Elijah_Hix » Wed, 2021-07-14 06:48
1
515 by rmoretti
Wed, 2021-07-14 07:07
Normal topic Compile C++ Rosetta to Pyrosetta ERROR
by michelleqyh » Fri, 2020-08-21 09:00
0
516 by michelleqyh
Fri, 2020-08-21 09:00
Normal topic how does rosetta handle hydrogens?
by patcD » Tue, 2021-08-31 00:48
2
517 by patcD
Wed, 2021-09-01 06:54
Normal topic I made a params file generation webpage
by matteoferla » Wed, 2020-07-22 03:08
0
520 by matteoferla
Wed, 2020-07-22 03:08
Normal topic PIPER-FlexPepDock protocol file apply_ftresult.py missing
by diasmarieli » Thu, 2021-11-04 06:33
2
521 by diasmarieli
Fri, 2021-11-26 05:11
Normal topic Extracting a part of a silent file as another silent file
by almeida85 » Wed, 2021-07-28 23:53
1
529 by zivben
Sat, 2021-07-31 08:16
Normal topic "Rosetta predictions of density, heat of vaporization (∆Hvap) and heat capacity (Cp(l))"
by matteoferla » Tue, 2020-07-14 01:51
0
531 by matteoferla
Tue, 2020-07-14 01:51
Normal topic Problem with match on enzdes
by ahuls1 » Thu, 2021-07-29 13:21
1
532 by ahuls1
Thu, 2021-07-29 13:23
Normal topic Using NCAA
by ate » Sat, 2021-05-01 02:52
0
532 by ate
Sat, 2021-05-01 02:52
Normal topic Show I be using beta_nov16 scorefxn?
by matteoferla » Thu, 2021-04-01 04:06
0
533 by matteoferla
Thu, 2021-04-01 04:06
Normal topic Error with filter in rosseta_scripts
by Osmany Guirola » Mon, 2020-05-11 04:52
0
535 by Osmany Guirola
Mon, 2020-05-11 04:52
Normal topic Explicit water
by tsztain » Wed, 2021-08-25 05:54
1
539 by matteoferla
Thu, 2021-09-02 03:50
Normal topic How RosettaCM can perform part of C terminal domain (CTD) structure prediction without proper template structures (coordinates)
by haom » Tue, 2020-09-01 13:21
0
541 by haom
Tue, 2020-09-01 18:50
Normal topic Does it make sense to perform Docking on a complex?
by chrisHKL » Mon, 2020-02-17 09:12
0
548 by chrisHKL
Mon, 2020-02-17 09:12
Normal topic Questions about alanine scanning in Rosetta
by LTJ » Mon, 2020-07-06 14:13
0
549 by LTJ
Mon, 2020-07-06 14:13
Normal topic Why does the sum of the per-residue total energy not match the whole score?
by matteoferla » Fri, 2021-07-09 08:36
2
552 by matteoferla
Mon, 2021-07-12 02:23
Normal topic Unrecognized atom parameter with denovo_density
by kalabharath » Mon, 2020-06-29 06:59
0
553 by kalabharath
Mon, 2020-06-29 06:59
Normal topic ligand docking error
by YuFei » Wed, 2020-04-22 17:27
0
556 by YuFei
Wed, 2020-04-22 17:27
Normal topic partial charge of params file in ligand docking
by rohi » Fri, 2021-05-28 08:43
1
565 by rmoretti
Fri, 2021-05-28 08:54
Normal topic Error: Element 'RandomizeBBByRamaPrePro': This element is not expected.
by nferruz » Fri, 2020-08-28 06:04
0
566 by nferruz
Fri, 2020-08-28 06:05
Normal topic Better minimization with Rosetta
by Elijah_Hix » Wed, 2021-07-28 13:53
1
567 by matteoferla
Mon, 2021-08-09 01:53
Normal topic Structure refinement for helical assembles using Rosetta
by xiaoyanzi » Thu, 2020-06-18 00:34
0
569 by xiaoyanzi
Thu, 2020-06-18 00:36
Normal topic Help - Protein-Protein interface design
by Dinesh Kumar » Thu, 2021-01-28 00:47
1
569 by rmoretti
Tue, 2021-02-09 10:29
Normal topic pyrosetta.rosetta.core.pose.rna
by chenjief » Tue, 2021-11-23 07:03
3
573 by matteoferla
Mon, 2022-01-10 06:44
Normal topic Clustering problem
by Suuo » Tue, 2021-04-20 01:40
1
576 by rmoretti
Tue, 2021-04-20 13:06
Normal topic RosettaCM: help to generate similar models as those from Robetta Server
by haom » Wed, 2020-09-09 09:19
0
584 by haom
Wed, 2020-09-09 09:19
Normal topic Searching density map using real space correlation
by ahmadkhalifa » Fri, 2018-12-28 00:28
0
588 by ahmadkhalifa
Fri, 2018-12-28 00:28
Normal topic Side-chain grafting in fixed scaffold
by Kazu » Wed, 2020-05-20 08:45
0
589 by Kazu
Wed, 2020-05-20 11:58
Normal topic using full atom constraint in docking
by rohi » Thu, 2020-10-15 10:28
0
602 by rohi
Thu, 2020-10-15 10:28

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