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Rosetta 3 - General

Topic / Topic starter Replies Views Last postsort descending
Normal topic Only 430 models are generated for membrane prediction
by justin » Wed, 2010-01-06 00:04
3
3,688 by smlewis
Mon, 2014-04-21 06:47
Normal topic Checkpoints in Rosetta
by exchhattu » Mon, 2009-10-19 17:47
2
3,133 by exchhattu
Mon, 2014-04-21 06:47
Normal topic rosetta 3.1-how to run parallel tasks?
by wtscrystal » Fri, 2009-11-06 03:23
4
6,008 by lqzhang
Mon, 2014-04-21 06:47
Normal topic Rosetta membrane prediction!
by wtscrystal » Tue, 2009-11-17 05:55
0
2,407 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic activation of filters in rosetta3.0 or later
by exchhattu » Thu, 2009-12-03 17:52
2
2,856 by exchhattu
Mon, 2014-04-21 06:47
Normal topic Building Rosetta PROBLEM
by nunesjulioc » Fri, 2010-02-26 06:03
1
2,036 by smlewis
Mon, 2014-04-21 06:47
Normal topic About Rosetta Scoring Function
by wszjzhang » Wed, 2010-02-03 09:22
1
2,474 by smlewis
Mon, 2014-04-21 06:47
Normal topic rerun same experiment on MPI.
by exchhattu » Tue, 2010-02-23 21:14
7
7,169 by exchhattu
Mon, 2014-04-21 06:47
Normal topic how to use rosettadesign to do mutations on protein structure
by lqzhang » Thu, 2010-03-04 07:43
3
4,227 by vanita
Mon, 2014-04-21 06:47
Normal topic docking using rosetta3.1 and rosetta2.3 leads to very different results
by lqzhang » Thu, 2010-01-14 11:54
1
2,177 by sid
Mon, 2014-04-21 06:47
Normal topic Compilation error
by zgcarvalho » Fri, 2010-02-12 06:58
1
2,083 by smlewis
Mon, 2014-04-21 06:47
Normal topic loop remodelling with a fixed bound DNA
by jtmacd » Thu, 2010-02-25 03:23
8
6,676 by jtmacd
Mon, 2014-04-21 06:47
Normal topic new installation on local computer problem
by lqzhang » Mon, 2010-02-01 08:41
1
1,983 by smlewis
Mon, 2014-04-21 06:47
Normal topic building a 77 aa long protein fragment
by tevang » Sat, 2010-02-20 11:37
8
7,672 by gsmurphy
Mon, 2014-04-21 06:47
Normal topic runtime error
by exchhattu » Wed, 2010-03-03 02:54
2
2,610 by exchhattu
Mon, 2014-04-21 06:47
Normal topic mcm for Docking in Rosetta3.1
by dyq » Tue, 2010-01-12 13:44
1
2,326 by smlewis
Mon, 2014-04-21 06:47
Normal topic Explanations to membrane_abinitio options
by justin » Wed, 2010-02-10 01:14
3
3,358 by justin
Mon, 2014-04-21 06:47
Normal topic shockingly low fragment diversity ___nnmake failed
by anusmita_sahoo » Wed, 2010-03-10 21:15
0
1,536 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic have trouble with "relax" models
by wszjzhang » Thu, 2010-01-28 10:02
1
2,177 by smlewis
Mon, 2014-04-21 06:47
Normal topic Compilation in Mac OS 10.6
by rjn » Thu, 2010-02-18 12:35
1
2,291 by smlewis
Mon, 2014-04-21 06:47
Normal topic Building Rosetta 3.1 for cs-Rosetta
by zdn3023 » Fri, 2010-02-26 14:31
2
3,078 by zdn3023
Mon, 2014-04-21 06:47
Normal topic how to use backrub in rosetta3.1
by lqzhang » Mon, 2010-01-11 14:43
3
3,448 by smlewis
Mon, 2014-04-21 06:47
Normal topic Relax structure using Membrane Environment Scoring Function
by anna.duncan » Thu, 2010-02-04 08:01
6
8,169 by jruhym
Mon, 2014-04-21 06:47
Normal topic NOE constraints with Rosetta 3.1
by mpiuzzi » Wed, 2010-02-24 02:40
3
3,627 by mpiuzzi
Mon, 2014-04-21 06:47
Normal topic Using Patches in Rosetta
by JS » Wed, 2010-03-10 13:32
6
8,319 by JS
Mon, 2014-04-21 06:47
Normal topic Derivative of the Energy function?
by MkM » Fri, 2010-01-15 08:00
1
2,388 by smlewis
Mon, 2014-04-21 06:47
Normal topic all-atom refinement with Relax application
by zwenthor » Mon, 2010-02-15 22:45
2
2,959 by zwenthor
Mon, 2014-04-21 06:47
Normal topic rosetta@home in local PC farm
by jarod » Wed, 2010-05-05 18:31
1
2,245 by smlewis
Mon, 2014-04-21 06:47
Normal topic make fragments for a loop
by jarod » Mon, 2010-03-15 07:31
2
2,874 by jarod
Mon, 2014-04-21 06:47
Normal topic Abinitio Structure Prediction - Sanity Test
by westleys » Tue, 2010-06-01 00:28
2
3,124 by westleys
Mon, 2014-04-21 06:47
Normal topic Could the Relax step be used separately ? (solved)
by wszjzhang » Tue, 2010-03-30 15:00
1
2,148 by smlewis
Mon, 2014-04-21 06:47
Normal topic Model Extraction
by mdweirna » Tue, 2010-04-13 15:28
1
2,040 by smlewis
Mon, 2014-04-21 06:47
Normal topic relax from a silent input file
by mintseris » Thu, 2010-04-29 19:54
2
3,064 by mintseris
Mon, 2014-04-21 06:47
Normal topic build rosetta by cross-platform compiler
by jarod » Fri, 2010-05-07 21:49
1
2,046 by smlewis
Mon, 2014-04-21 06:47
Normal topic Building Rosetta Problem: Processor architecture unsupported?
by jalfaro » Tue, 2010-03-23 05:48
1
2,995 by reddybg
Mon, 2014-04-21 06:47
Normal topic Snugdock and antibody modelling
by sudhar » Thu, 2010-06-10 08:13
1
2,565 by smlewis
Mon, 2014-04-21 06:47
Normal topic Homology modeling starter script
by gobli033 » Thu, 2010-04-01 07:27
0
1,555 by gobli033
Mon, 2014-04-21 06:47
Normal topic To smlewis............parallel job submission
by anusmita_sahoo » Mon, 2010-04-19 22:28
0
1,588 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic benchmark for rosetta3.1
by anusmita_sahoo » Tue, 2010-05-04 22:05
0
1,550 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic max_nn
by anusmita_sahoo » Thu, 2010-03-11 02:21
1
2,063 by smlewis
Mon, 2014-04-21 06:47
Normal topic How to obtain alignment file for comparative modeling under Rosetta 3.1?
by lennylv » Tue, 2010-05-25 01:29
11
17,653 by sabine
Mon, 2014-04-21 06:47
Normal topic generate full atom coordinates with abinitio rosetta structure prediction
by anusmita_sahoo » Tue, 2010-03-30 00:11
2
3,229 by Trentage
Mon, 2014-04-21 06:47
Normal topic scoring function changed from 2.3?
by jarod » Mon, 2010-04-12 18:56
1
2,019 by smlewis
Mon, 2014-04-21 06:47
Normal topic homo-oligomeric proteins.............folddock+symmetry+abinito
by anusmita_sahoo » Thu, 2010-04-29 02:59
2
3,711 by biofisikx
Mon, 2014-04-21 06:47
Normal topic generating 10 lowest energy structures from abinitio
by isengupta13 » Fri, 2010-05-07 11:44
2
2,633 by ndousis
Mon, 2014-04-21 06:47
Normal topic Clustering TM domain of transmembrane protein
by justin » Sun, 2010-03-21 23:26
0
1,575 by justin
Mon, 2014-04-21 06:47
Normal topic problems in building rosetta3.1 (solved)
by zpliu09 » Wed, 2010-03-31 02:03
1
2,048 by smlewis
Mon, 2014-04-21 06:47
Normal topic 3D Structure Prediction
by anirbanzz » Sat, 2010-04-17 02:47
1
2,750 by smlewis
Mon, 2014-04-21 06:47
Normal topic Fix missing backbone residues
by Matthys » Mon, 2010-05-03 09:03
2
3,740 by Matthys
Mon, 2014-04-21 06:47
Normal topic Fold tree error
by mansi » Tue, 2010-05-18 07:43
2
3,977 by mansi
Mon, 2014-04-21 06:47
Normal topic Scoring Centroid Structures
by Trentage » Sun, 2010-03-28 19:21
0
1,945 by Trentage
Mon, 2014-04-21 06:47
Normal topic relax NOT CONVERGED
by albumns » Thu, 2010-06-24 21:25
3
3,389 by smlewis
Mon, 2014-04-21 06:47
Normal topic problems with cluster program
by umeshghosh » Thu, 2010-04-08 07:45
1
2,531 by smlewis
Mon, 2014-04-21 06:47
Normal topic Cluster Error
by justin » Mon, 2010-04-26 00:06
2
2,979 by justin
Mon, 2014-04-21 06:47
Normal topic what is the relationship and difference between Rosetta 3.0 and miniRosetta
by jarod » Thu, 2010-05-06 20:57
2
2,962 by jarod
Mon, 2014-04-21 06:47
Normal topic "CEN" atom in the pdb file
by wszjzhang » Wed, 2010-03-17 14:35
3
4,862 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic Rosetta dock parallel
by mahajanr » Tue, 2010-06-01 16:04
3
4,339 by smlewis
Mon, 2014-04-21 06:47
Normal topic Problem creating pNNMAKE.gnu
by anirbanzz » Sat, 2010-04-17 02:14
3
4,186 by monica0569
Mon, 2014-04-21 06:47
Normal topic total score
by score » Mon, 2010-05-03 02:03
1
2,381 by smlewis
Mon, 2014-04-21 06:47
Normal topic CS-Rosetta fragments
by isengupta13 » Sun, 2010-05-16 08:08
1
2,732 by AndrewBworth
Mon, 2014-04-21 06:47
Normal topic About generating Fullatom structures
by wszjzhang » Wed, 2010-03-24 19:27
1
2,153 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic how to build homology based models?
by albumns » Thu, 2010-06-24 10:27
0
1,520 by albumns
Mon, 2014-04-21 06:47
Normal topic How do the homology sequences exclude from fragment files?
by exchhattu » Mon, 2010-04-05 03:04
1
2,115 by smlewis
Mon, 2014-04-21 06:47
Normal topic Problem running make_fragments.pl script
by anirbanzz » Thu, 2010-04-22 01:27
0
1,842 by anirbanzz
Mon, 2014-04-21 06:47
Normal topic abinitiorelax: No funnel
by cno » Tue, 2010-07-27 06:14
6
5,740 by biofisikx
Mon, 2014-04-21 06:47
Normal topic RosettaMatch in Rosetta3.2?
by SenyorDrew » Fri, 2010-08-13 07:47
1
2,819 by smlewis
Mon, 2014-04-21 06:47
Normal topic Problems installing Rosetta
by S » Fri, 2010-09-03 01:04
4
6,188 by abdullah_ahmed
Mon, 2014-04-21 06:47
Normal topic Non-ideal residue detected
by cnelson » Thu, 2010-07-01 12:20
1
2,288 by smlewis
Mon, 2014-04-21 06:47
Normal topic Bind a Ligand to RNA
by hdavis9 » Wed, 2010-07-14 09:07
3
3,280 by smlewis
Mon, 2014-04-21 06:47
Hot topic problem compiling rosetta3.1 in windows vista 32 bit using cygwin 1.7.5-1
by Marsia » Thu, 2010-07-22 22:49
18
16,088 by smlewis
Mon, 2014-04-21 06:47
Normal topic extract 10001+ pdbs
by viochemist » Thu, 2010-07-29 16:25
1
1,990 by smlewis
Mon, 2014-04-21 06:47
Normal topic Parallel computing?
by mansi » Thu, 2010-08-19 08:39
1
2,328 by smlewis
Mon, 2014-04-21 06:47
Normal topic Problem with run_lips.pl script
by wdyrka » Tue, 2010-09-07 11:07
1
2,354 by smlewis
Mon, 2014-04-21 06:47
Normal topic RNA Parameter File
by hdavis9 » Tue, 2010-07-06 11:36
4
4,039 by smlewis
Mon, 2014-04-21 06:47
Normal topic cluster results
by albumns » Sun, 2010-07-18 23:59
0
1,483 by albumns
Mon, 2014-04-21 06:47
Normal topic Failure to find libraries during build
by NCallahan » Mon, 2010-07-26 15:41
3
5,248 by smlewis
Mon, 2014-04-21 06:47
Normal topic input secondary structure prediction to AbinitioRelax
by biofisikx » Mon, 2010-08-09 12:36
2
2,697 by biofisikx
Mon, 2014-04-21 06:47
Normal topic Determine the weights of score functions
by SunH » Thu, 2010-09-02 07:20
3
4,539 by smlewis
Mon, 2014-04-21 06:47
Normal topic could I add some constrain to the backbone but not completely fix it when relax?
by albumns » Tue, 2010-06-29 05:43
4
3,972 by smlewis
Mon, 2014-04-21 06:47
Normal topic harmonic_Calphas in RosettaLigand flags.txt
by cpkuntz » Wed, 2010-07-14 08:57
2
2,627 by smlewis
Mon, 2014-04-21 06:47
Normal topic Design on NMR template
by enoee » Wed, 2010-07-21 05:29
1
1,984 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta 3.1 compile error, Linux 32 bit
by viochemist » Thu, 2010-07-29 08:40
11
12,677 by smlewis
Mon, 2014-04-21 06:47
Normal topic Successful installation on OpenSuse11.1 - tests?
by zharmad » Thu, 2010-08-19 00:30
4
3,941 by zharmad
Mon, 2014-04-21 06:47
Normal topic how to get reliable results for carbohydrate docking?
by albumns » Sun, 2010-09-05 23:12
3
4,963 by smlewis
Mon, 2014-04-21 06:47
Normal topic what kind of focefield does Rosetta based on?
by albumns » Tue, 2010-07-06 11:08
1
2,193 by smlewis
Mon, 2014-04-21 06:47
Normal topic PDB output sum
by enoee » Fri, 2010-07-16 12:29
1
2,190 by smlewis
Mon, 2014-04-21 06:47
Normal topic Loop extensions at the end of chains
by japgar » Mon, 2010-07-26 12:35
4
4,314 by japgar
Mon, 2014-04-21 06:47
Normal topic disulfide bridges in loop modeling
by pledor » Fri, 2010-08-06 06:49
2
3,273 by pledor
Mon, 2014-04-21 06:47
Normal topic weird prolines with hydroxyls from fixbb.linuxgccrelease
by louisclark » Wed, 2010-08-25 15:01
2
2,878 by louisclark
Mon, 2014-04-21 06:47
Normal topic ddg energy components
by japgar » Tue, 2010-07-13 13:20
1
33,003 by smlewis
Mon, 2014-04-21 06:47
Normal topic -dock_pert problem
by mahajanr » Mon, 2010-07-19 15:45
11
11,219 by weitzner
Mon, 2014-04-21 06:47
Normal topic SASA packing score in Rosetta 3.1
by enoee » Wed, 2010-07-28 01:45
6
6,918 by smlewis
Mon, 2014-04-21 06:47
Normal topic comparison of energy
by sdh » Mon, 2010-08-16 07:55
5
5,648 by smlewis
Mon, 2014-04-21 06:47
Normal topic Parallel computing in RosettaDock3.1?
by xhluo » Fri, 2010-09-03 02:31
3
3,653 by smlewis
Mon, 2014-04-21 06:47
Normal topic could ab initio support running mpi?
by albumns » Mon, 2010-07-05 01:13
1
2,730 by smlewis
Mon, 2014-04-21 06:47
Normal topic running ROBETTA protocol for proteins >1000 aa long
by tevang » Thu, 2010-07-15 07:09
0
1,591 by tevang
Mon, 2014-04-21 06:47
Normal topic pyRosetta problem
by exchhattu » Sun, 2010-07-25 22:25
0
1,531 by exchhattu
Mon, 2014-04-21 06:47
Normal topic ERROR: compiling rosetta3.1 with MPI
by biofisikx » Thu, 2010-08-05 16:00
6
6,600 by smlewis
Mon, 2014-04-21 06:47
Normal topic ERROR: f.check_fold_tree
by sudhar » Mon, 2010-08-23 08:59
3
3,759 by smlewis
Mon, 2014-04-21 06:47
Normal topic Interface rmsd calculation Irms
by mahajanr » Wed, 2010-07-07 18:24
5
7,958 by mahajanr
Mon, 2014-04-21 06:47
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