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Models which are not recorded (Abinitio protocol) by allan.ferrari » Fri, 2015-08-28 13:39 |
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3,051 |
by rmoretti Thu, 2015-09-17 12:42 |
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How to integrate Rosetta code to my program? by Lsg » Tue, 2011-06-28 07:18 |
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3,776 |
by smlewis Mon, 2014-04-21 06:47 |
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acceptable RMSD value in the clustered structures? by ritacc18 » Wed, 2013-06-19 14:53 |
3 |
8,065 |
by rmoretti Mon, 2014-04-21 06:48 |
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how to get reliable results for carbohydrate docking? by albumns » Sun, 2010-09-05 23:12 |
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4,419 |
by smlewis Mon, 2014-04-21 06:47 |
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Explanations to membrane_abinitio options by justin » Wed, 2010-02-10 01:14 |
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2,810 |
by justin Mon, 2014-04-21 06:47 |
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get_distances command in rosetta 3.5 by pramod » Mon, 2014-01-20 11:31 |
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2,984 |
by rmoretti Mon, 2014-04-21 06:48 |
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Simple FoldTree Question by gipsonb » Wed, 2012-04-25 18:19 |
3 |
3,277 |
by gipsonb Mon, 2014-04-21 06:47 |
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Comparison between two fragment pickers by qlj » Mon, 2013-09-02 06:34 |
3 |
3,223 |
by rmoretti Mon, 2014-04-21 06:48 |
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DomainAssembly Mover with constraints (using RosettaScripts) by resiros » Wed, 2016-09-21 11:19 |
3 |
3,202 |
by rmoretti Mon, 2016-11-14 14:21 |
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Peripheral membrane protein modeling by Fukiishi » Tue, 2018-10-02 02:09 |
3 |
2,294 |
by matteoferla Thu, 2018-10-04 01:30 |
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should rosetta3.1 do prepacking before docking? by lqzhang » Thu, 2010-01-07 12:15 |
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2,893 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta Dock with MPI / PBS by edpryor » Wed, 2012-09-05 11:04 |
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5,793 |
by smlewis Mon, 2014-04-21 06:47 |
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When does Rosetta switch from centroid to FA mode? by MarkW » Fri, 2015-07-03 04:48 |
3 |
3,013 |
by rmoretti Sun, 2015-07-05 14:28 |
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ddG from backrub by jte » Tue, 2010-10-05 14:09 |
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2,851 |
by smlewis Mon, 2014-04-21 06:47 |
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why energy is positive? by albumns » Tue, 2014-12-23 00:05 |
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3,780 |
by rmoretti Mon, 2015-02-09 11:21 |
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what is 05.2009 ideal coordinates by Lindsay » Tue, 2014-09-23 20:36 |
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2,962 |
by rmoretti Mon, 2014-09-29 13:45 |
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Can I thread a two chained structure in RosettaCM? by ahmadkhalifa » Mon, 2018-01-08 09:41 |
3 |
2,787 |
by aaxx Wed, 2019-11-06 01:44 |
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Rosetta-based projects using and licensing by SergeyP » Fri, 2018-10-26 15:45 |
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2,552 |
by SergeyP Mon, 2018-11-12 09:19 |
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Is it better to have smaller nstruct but many runs? by Loki01 » Mon, 2018-11-19 11:50 |
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1,986 |
by smlewis Mon, 2018-11-19 13:20 |
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how build (N-terminal 17 residues) structre /fragment file generation by venkatazb » Wed, 2016-07-27 23:56 |
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2,841 |
by smlewis Fri, 2016-07-29 07:43 |
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Design constraints on pairs of residues by SenyorDrew » Mon, 2017-10-02 07:25 |
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2,637 |
by SenyorDrew Mon, 2017-11-13 11:44 |
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Problem with HETATM entries in PDB file by asmi » Fri, 2011-05-20 10:17 |
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5,067 |
by smlewis Mon, 2014-04-21 06:47 |
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Problems with output control by Sunyp_IM » Thu, 2017-06-22 15:30 |
3 |
3,207 |
by rmoretti Wed, 2017-06-28 01:33 |
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Hydrogen bond detection and shape complementarity by sujigeorge1979 » Fri, 2019-06-14 02:39 |
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1,892 |
by sujigeorge1979 Thu, 2019-06-27 01:30 |
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Protein folding using Monte Carlo derived techniques and implicit solvation by hefeweizen » Tue, 2013-12-10 06:30 |
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3,553 |
by rmoretti Mon, 2014-04-21 06:48 |
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Molecular oxygen by matteoferla » Sat, 2018-02-24 06:05 |
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2,686 |
by matteoferla Mon, 2018-02-26 02:05 |
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How to make a resfile by dflaher » Fri, 2017-11-03 10:26 |
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3,514 |
by smlewis Wed, 2017-11-08 12:08 |
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relax NOT CONVERGED by albumns » Thu, 2010-06-24 21:25 |
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2,854 |
by smlewis Mon, 2014-04-21 06:47 |
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Loop modeling FLAGS by jklett » Fri, 2009-12-04 02:45 |
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2,980 |
by jklett Mon, 2014-04-21 06:47 |
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backrub score different from calculated score by attesor » Wed, 2014-04-09 07:34 |
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3,167 |
by rmoretti Thu, 2014-04-10 07:38 |
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Problem with outputing decoys in the process of AbinitioRelax by MA » Thu, 2017-07-13 23:27 |
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2,252 |
by rmoretti Thu, 2017-08-03 08:50 |
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Maximum Number of Constraints by jurkm » Fri, 2011-06-17 05:23 |
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4,495 |
by jurkm Mon, 2014-04-21 06:47 |
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Biopython error in mac os x by vinodh » Tue, 2012-06-12 12:23 |
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3,692 |
by jadolfbr Mon, 2014-04-21 06:47 |
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Error with simple_cycpep_predict protocol while using a native pdb file by Florent Langenfeld » Tue, 2019-03-26 10:05 |
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1,895 |
by Florent Langenfeld Tue, 2020-09-22 03:03 |
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first run of abinitio in rosetta 3.2 produces an error right away by burkheadlab » Fri, 2011-03-04 22:50 |
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3,142 |
by smlewis Mon, 2014-04-21 06:47 |
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Loop Modeling by ctaylor » Fri, 2009-12-18 11:42 |
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2,919 |
by ctaylor Mon, 2014-04-21 06:47 |
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how to use backrub in rosetta3.1 by lqzhang » Mon, 2010-01-11 14:43 |
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2,886 |
by smlewis Mon, 2014-04-21 06:47 |
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Quesition about Relax Mode by crysta11 » Wed, 2009-10-21 09:57 |
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3,167 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta3.2 cluster application file-reading error by mdyini » Wed, 2011-03-09 16:59 |
3 |
5,041 |
by smlewis Mon, 2014-04-21 06:47 |
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Information about “membrane_highres_Menv_smooth.wts” by Groros » Sun, 2011-10-02 03:59 |
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3,323 |
by smlewis Mon, 2014-04-21 06:47 |
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ddg calculation by Lindsay » Thu, 2013-09-12 10:19 |
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4,996 |
by Lindsay Mon, 2014-04-21 06:48 |
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Running RosettaScripts, but got an error "src/utility/options/OptionCollection.cc, line 1153, No values of the appropriate type" by zhoubin » Sun, 2021-02-28 08:51 |
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1,255 |
by zhoubin Mon, 2021-03-01 22:11 |
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calculate low-resolution total docking score for a input pdb by jasnyderjr » Fri, 2015-12-11 23:08 |
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3,276 |
by rmoretti Wed, 2015-12-16 11:22 |
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make_fragments by sumukh21 » Wed, 2011-02-23 09:29 |
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3,295 |
by sumukh21 Mon, 2014-04-21 06:47 |
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Solving van der waals clashes in a transmembrane protein model with rosetta by doranhen » Wed, 2012-12-05 00:12 |
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3,265 |
by smlewis Mon, 2014-04-21 06:47 |
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manually changing fixbb residue ref energies by jtmacd » Wed, 2009-11-25 08:43 |
4 |
3,428 |
by jtmacd Mon, 2014-04-21 06:47 |
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protein protein docking pipeline by dzhao » Thu, 2012-07-19 06:25 |
4 |
5,212 |
by smlewis Mon, 2014-04-21 06:47 |
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Error when running enzyme_design tutorial by linucks » Fri, 2017-06-30 12:26 |
4 |
3,072 |
by linucks Mon, 2017-07-03 09:50 |
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Does Rosetta recognise OXT atom type in PDB.? by monos_morpheus » Mon, 2011-04-11 23:57 |
4 |
4,781 |
by monos_morpheus Mon, 2014-04-21 06:47 |
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Energy calculation for protein design by Filipe » Sat, 2011-11-26 15:01 |
4 |
6,589 |
by Filipe Mon, 2014-04-21 06:47 |
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computer specifications by rlwoltz » Tue, 2012-10-09 16:11 |
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5,274 |
by rlwoltz Mon, 2014-04-21 06:47 |
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a question about loop refinement by albumns » Fri, 2012-03-02 09:38 |
4 |
4,818 |
by albumns Mon, 2014-04-21 06:47 |
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Suppressing Rosetta output, flag for that? by msellers » Tue, 2011-04-26 11:18 |
4 |
4,562 |
by smlewis Mon, 2014-04-21 06:47 |
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How the Rosetta score (dG) is actually related to dH (enthalpy) and dS (entropy)? by lanselibai » Thu, 2014-12-04 13:16 |
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5,467 |
by lanselibai Fri, 2014-12-12 10:27 |
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I have a .tab file. How do I extract information from it? by monos_morpheus » Tue, 2011-02-08 09:30 |
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4,620 |
by monos_morpheus Mon, 2014-04-21 06:47 |
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rosetta 3.1-how to run parallel tasks? by wtscrystal » Fri, 2009-11-06 03:23 |
4 |
5,091 |
by lqzhang Mon, 2014-04-21 06:47 |
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Discarding atoms for fixbb by Jacob-kong » Tue, 2012-06-26 06:23 |
4 |
4,649 |
by Jacob-kong Mon, 2014-04-21 06:47 |
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Give diferent chain information for a single sequence (comparative modeling) by Martin Floor » Tue, 2013-04-02 08:59 |
4 |
4,045 |
by Martin Floor Mon, 2014-04-21 06:47 |
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span and frags filefor multichain transmembrane protein by zhiguang » Wed, 2016-10-26 13:28 |
4 |
3,329 |
by zhiguang Tue, 2016-11-15 12:27 |
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Symmetric abrelax modeling by SenyorDrew » Fri, 2011-02-18 10:14 |
4 |
3,905 |
by IAndre Mon, 2014-04-21 06:47 |
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total energy score of the pdb structure by Lindsay » Tue, 2012-05-01 12:14 |
4 |
5,687 |
by Lindsay Mon, 2014-04-21 06:47 |
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Comparative Modeling Tutorial Script not working by Srinivas23 » Thu, 2017-09-21 12:00 |
4 |
2,734 |
by Srinivas23 Tue, 2017-10-24 10:58 |
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Error when attempting to relax pdb, "flag_input_relax" not found by Wexter300 » Mon, 2023-01-23 11:32 |
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81 |
by Wexter300 Wed, 2023-01-25 12:34 |
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solvation by gw » Wed, 2011-08-31 17:14 |
4 |
4,008 |
by smlewis Mon, 2014-04-21 06:47 |
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Can anyone become a Rosetta developer? by cossio » Thu, 2015-01-22 05:10 |
4 |
5,293 |
by cossio Thu, 2015-01-29 11:50 |
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protein ligand docking by patrickchirdon » Sun, 2018-12-30 15:07 |
4 |
2,654 |
by smlewis Mon, 2018-12-31 08:58 |
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Flexible backbone design using PSSM by kalicuta » Thu, 2012-07-26 13:38 |
4 |
4,334 |
by rmoretti Mon, 2014-04-21 06:47 |
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core.scoring.rms_util: WARNING: CA_rmsd out of range... by mdyini » Sat, 2012-02-25 16:14 |
4 |
3,775 |
by mdyini Mon, 2014-04-21 06:47 |
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UBQ chemically conjugated docking error by cheyuk » Fri, 2015-09-18 06:57 |
4 |
3,936 |
by cheyuk Sun, 2015-09-20 02:08 |
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RosettaMatch in 3.2 by jtmacd » Mon, 2010-12-20 08:04 |
4 |
4,382 |
by jtmacd Mon, 2014-04-21 06:47 |
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computer shuts down during autobulding with rosetta by intekhab » Tue, 2011-07-19 01:07 |
4 |
3,748 |
by rmoretti Mon, 2014-04-21 06:47 |
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Updated publications/details on Rosetta score function? by nitroamos » Tue, 2009-10-20 19:48 |
4 |
4,242 |
by rmoretti Mon, 2015-03-30 14:43 |
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Picking the correct model from a large set of decoys (30,000+) by brspurri » Thu, 2012-04-26 15:37 |
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4,961 |
by rmoretti Mon, 2014-04-21 06:47 |
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Relax protocol details for Rosetta 3.1 by Matthys » Sun, 2012-01-15 10:00 |
4 |
3,840 |
by rmoretti Mon, 2014-04-21 06:47 |
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[Mover] is not known to the MoverFactory by Jhreed » Fri, 2016-08-05 12:23 |
4 |
3,546 |
by msardejani Sun, 2016-08-07 17:49 |
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Can I compare binding affinity of different ligands using Rosetta? by zg148119@ohio.edu » Sun, 2020-12-06 11:30 |
4 |
2,315 |
by nannemdp Fri, 2021-02-05 06:49 |
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Using rosetta 3 to make a fragment library and then use it to model loop of a protein structure by bharat_46010 » Sun, 2011-01-23 05:22 |
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6,586 |
by dgront Mon, 2014-04-21 06:47 |
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pepspec aplication - segmentation fault by tiagogomes89 » Fri, 2011-09-02 11:18 |
4 |
3,666 |
by smlewis Mon, 2014-04-21 06:47 |
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how to do cluster after low resolution protein-protein docking? by albumns » Sat, 2010-11-27 01:17 |
4 |
3,899 |
by albumns Mon, 2014-04-21 06:47 |
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rs filter for terms in .sc files by gw » Sat, 2012-08-18 16:20 |
4 |
4,123 |
by gw Mon, 2014-04-21 06:47 |
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problem parsing a THR residue by decrSTL » Wed, 2019-08-21 12:25 |
4 |
2,174 |
by decrSTL Tue, 2019-08-27 10:24 |
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Problems installing Rosetta by S » Fri, 2010-09-03 01:04 |
4 |
5,508 |
by abdullah_ahmed Mon, 2014-04-21 06:47 |
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multiple cst files by logandonaldson » Wed, 2013-03-20 12:16 |
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3,820 |
by logandonaldson Mon, 2014-04-21 06:47 |
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Iterative local rebuilding vs automated structure refinement by ahmadkhalifa » Fri, 2018-09-14 07:44 |
4 |
2,798 |
by rmoretti Wed, 2018-11-21 14:11 |
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How can move peptide on cleft of enzyme on Flexpepdock? by phanvy » Thu, 2014-06-05 02:22 |
4 |
3,877 |
by zaldini Fri, 2015-01-02 05:38 |
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Problem with the -dock_ppk flag by lzx32 » Sat, 2011-04-30 00:21 |
4 |
4,143 |
by lzx32 Mon, 2014-04-21 06:47 |
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rosetta 3.1 recognizes PO4 group in dockinglocalrefine option? by nilkoeg » Thu, 2011-03-10 23:19 |
4 |
4,736 |
by nilkoeg Mon, 2014-04-21 06:47 |
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Random seed confusion by pardave » Mon, 2012-11-12 09:45 |
4 |
4,085 |
by pardave Mon, 2014-04-21 06:47 |
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RosettaCM rename or swap the order of sequences in your alignment file by ahmadkhalifa » Fri, 2017-12-22 08:42 |
4 |
3,021 |
by rmoretti Mon, 2018-01-15 15:24 |
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C-term amidation by tttt » Tue, 2021-03-02 07:46 |
4 |
1,916 |
by tatsiana.bylund Mon, 2022-01-24 07:58 |
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ERROR: Unable to open weights/patch file by peony » Sun, 2013-11-17 02:49 |
4 |
6,706 |
by rmoretti Tue, 2019-07-09 10:29 |
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Unrecognised resiudues when rescoring PDB files generated by enzyme_design under MPI by linucks » Tue, 2018-02-13 03:41 |
4 |
3,285 |
by linucks Fri, 2018-02-23 08:08 |
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how to keep native structure when do loop modeling by zlni » Sun, 2009-05-03 10:12 |
4 |
3,569 |
by zlni Mon, 2014-04-21 06:47 |
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Ab initio structure prediction for long amino acid sequence by maruhuang » Fri, 2019-08-02 03:38 |
4 |
2,220 |
by maruhuang Thu, 2019-09-26 18:55 |
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Enzyme Design by bharat_46010 » Tue, 2014-11-25 23:55 |
4 |
5,179 |
by bharat_46010 Mon, 2014-12-15 20:51 |
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RNA Parameter File by hdavis9 » Tue, 2010-07-06 11:36 |
4 |
3,362 |
by smlewis Mon, 2014-04-21 06:47 |
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The vall.jul19.2011.gz Database by ac.research » Fri, 2017-09-01 02:29 |
4 |
3,742 |
by ac.research Mon, 2017-09-04 16:43 |
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Does a negative Rosetta dG imply a favorable process? by cossio » Tue, 2014-12-09 05:13 |
4 |
3,954 |
by lanselibai Tue, 2014-12-16 10:48 |
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membrane protein packing prediction by djpittdj » Fri, 2012-01-13 08:55 |
4 |
3,646 |
by pardave Mon, 2014-04-21 06:47 |
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How to automatically position new peptides into the binding site of a enzime, in order to run peptide-protein docking approaches by zaldini » Fri, 2015-01-02 05:53 |
4 |
3,897 |
by zaldini Wed, 2015-01-07 20:35 |
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