
You are here
Rosetta 3 - General
Log in to post new content in the forum.
Topic / Topic starter![]() |
Replies | Views | Last post | |
---|---|---|---|---|
Rosetta and design of ligand binding site by rohi » Mon, 2021-03-15 06:00 |
0 |
697 |
by rohi Mon, 2021-03-15 06:31 |
|
Rosetta and SAM 3.5! by wtscrystal » Sat, 2009-11-14 22:49 |
0 |
1,779 |
by wtscrystal Mon, 2014-04-21 06:47 |
|
Rosetta Antibody cuts off light chain? by ziheng@mit.edu » Thu, 2019-05-02 15:17 |
1 |
1,162 |
by jeliazkov Fri, 2019-05-03 07:00 |
|
Rosetta Antibody Prepack - Problem HL_A vs. LH_A by cannond » Fri, 2017-03-03 02:41 |
5 |
4,422 |
by cannond Wed, 2017-03-08 03:00 |
|
Rosetta Antibody: Unable to open file and terminates by denatured » Thu, 2019-12-12 11:26 |
1 |
1,919 |
by denatured Fri, 2019-12-13 11:19 |
|
Rosetta atoms types for enzyme design by bharat_46010 » Thu, 2011-11-10 06:01 |
2 |
3,574 |
by rmoretti Mon, 2014-04-21 06:47 |
|
Rosetta can't handle symmetric fold and dock for >10-subunit protein? by myang » Mon, 2011-09-26 11:52 |
3 |
3,240 |
by IAndre Mon, 2014-04-21 06:47 |
|
Rosetta changing Atom Name in PDB ATOM record? by chrisHKL » Tue, 2020-03-03 20:50 |
1 |
1,125 |
by smlewis Wed, 2020-03-04 07:40 |
|
Rosetta CM - Ignore Sporadic Errors by Swillard » Wed, 2018-06-13 05:47 |
6 |
3,664 |
by rmoretti Mon, 2018-11-12 14:29 |
|
Rosetta CM incorrect threading by ahmadkhalifa » Mon, 2018-08-06 11:09 |
6 |
4,097 |
by rmoretti Fri, 2018-08-24 11:59 |
|
Rosetta CM round_thread.pdb doesn't exist and can't find pose (id = round) by ahmadkhalifa » Wed, 2018-05-23 09:51 |
2 |
2,758 |
by rmoretti Thu, 2018-06-28 14:09 |
|
rosetta compile by MA » Wed, 2017-04-26 00:46 |
2 |
1,841 |
by MA Thu, 2017-04-27 18:53 |
|
Rosetta Design Stalling by Jhreed » Sun, 2016-03-06 14:38 |
3 |
2,825 |
by rmoretti Mon, 2016-03-07 14:20 |
|
Rosetta Dock by swoody » Tue, 2009-11-10 16:20 |
1 |
2,643 |
by smlewis Mon, 2014-04-21 06:47 |
|
Rosetta dock parallel by mahajanr » Tue, 2010-06-01 16:04 |
3 |
3,772 |
by smlewis Mon, 2014-04-21 06:47 |
|
Rosetta Dock with MPI / PBS by edpryor » Wed, 2012-09-05 11:04 |
3 |
5,841 |
by smlewis Mon, 2014-04-21 06:47 |
|
Rosetta documentation by Ashafix » Sat, 2013-08-31 06:50 |
3 |
4,518 |
by Ashafix Mon, 2014-04-21 06:48 |
|
Rosetta Double changing mmCIF chain ID by Victor Tobiasson » Thu, 2021-05-13 07:57 |
2 |
1,031 |
by Victor Tobiasson Thu, 2021-05-13 08:33 |
|
Rosetta Enzyme design cst block raises error by cryosky » Thu, 2021-09-16 08:47 |
1 |
791 |
by cryosky Fri, 2021-09-17 22:04 |
|
Rosetta for design of artifical metalloenzyme by Delfosse57 » Thu, 2022-05-19 21:47 |
1 |
513 |
by matteoferla Fri, 2022-06-03 01:09 |
|
Rosetta forcefield terms and interpretation by zigeuner » Sat, 2013-05-25 16:59 |
2 |
4,380 |
by rmoretti Mon, 2014-04-21 06:47 |
|
Rosetta groups in Scandinavia by knutjbj » Mon, 2010-11-15 23:50 |
1 |
2,027 |
by smlewis Mon, 2014-04-21 06:47 |
|
Rosetta Holes and Packstat scoring by nick.polizzi » Fri, 2013-08-02 09:06 |
1 |
3,401 |
by rmoretti Mon, 2014-04-21 06:48 |
|
Rosetta job distribution error by ss » Thu, 2019-08-01 09:26 |
8 |
4,313 |
by ac.research Mon, 2020-02-10 08:19 |
|
Rosetta lack of necessary application by ylwang » Wed, 2018-11-07 01:13 |
3 |
2,250 |
by rmoretti Wed, 2018-11-21 13:50 |
|
Rosetta matching error by purvi24 » Mon, 2018-03-12 02:38 |
1 |
1,772 |
by smlewis Mon, 2018-03-12 09:57 |
|
Rosetta membrane blastpgp/psiblast database problem for lips4 generation by fbarrera » Tue, 2014-09-16 11:45 |
1 |
2,664 |
by rmoretti Wed, 2014-09-17 10:06 |
|
Rosetta membrane prediction! by wtscrystal » Tue, 2009-11-17 05:55 |
0 |
2,161 |
by wtscrystal Mon, 2014-04-21 06:47 |
|
Rosetta movie. by exchhattu » Mon, 2009-09-14 21:02 |
1 |
2,016 |
by smlewis Mon, 2014-04-21 06:47 |
|
rosetta nonlocal application by mintseris » Tue, 2013-12-31 13:13 |
1 |
1,985 |
by rmoretti Mon, 2014-04-21 06:48 |
|
Rosetta numbering with missing occupancies by ShaneOConnor » Fri, 2011-10-07 16:18 |
2 |
3,214 |
by ShaneOConnor Mon, 2014-04-21 06:47 |
|
rosetta on snow leopard? by nitroamos » Thu, 2009-10-01 17:07 |
3 |
4,333 |
by nitroamos Mon, 2014-04-21 06:47 |
|
Rosetta params for taxol by ahmadkhalifa » Sat, 2019-03-30 22:37 |
1 |
1,178 |
by rmoretti Wed, 2019-04-03 10:03 |
|
Rosetta reference energy by Lindsay » Mon, 2012-05-07 07:56 |
9 |
8,360 |
by Lindsay Mon, 2014-04-21 06:47 |
|
Rosetta relax application for generating ensemble of structures. by abhi_pe_acharya » Mon, 2018-02-26 09:08 |
3 |
2,834 |
by ssrb Tue, 2018-03-06 14:15 |
|
Rosetta releases and revision numbers by ShaneOConnor » Thu, 2011-11-17 13:55 |
2 |
4,208 |
by smlewis Mon, 2014-04-21 06:47 |
|
Rosetta remodel on intel Xeon Phi by pablogalazdavison » Wed, 2016-09-14 15:35 |
3 |
2,854 |
by pablogalazdavison Thu, 2016-09-15 16:36 |
|
Rosetta repacking output by doranhen » Mon, 2012-12-03 03:44 |
5 |
5,226 |
by doranhen Mon, 2014-04-21 06:47 |
|
Rosetta Resfile header by G Mustafa » Mon, 2020-01-20 06:45 |
2 |
1,601 |
by G Mustafa Tue, 2020-01-21 06:04 |
|
rosetta run error by isengupta13 » Thu, 2010-06-03 19:00 |
2 |
2,712 |
by aminzia Fri, 2019-07-26 13:14 |
|
Rosetta script to relax a neighborhood only by matteoferla » Mon, 2018-10-29 03:34 |
1 |
1,318 |
by jadolfbr Fri, 2018-11-09 09:17 |
|
rosetta scripts to superimpose multiple segments by rlwoltz » Fri, 2022-04-29 15:15 |
0 |
293 |
by rlwoltz Fri, 2022-04-29 15:15 |
|
Rosetta structure refinement alters bound ligand by ahmadkhalifa » Mon, 2018-07-23 07:49 |
1 |
1,520 |
by rmoretti Fri, 2018-08-03 08:59 |
|
Rosetta-based projects using and licensing by SergeyP » Fri, 2018-10-26 15:45 |
3 |
2,586 |
by SergeyP Mon, 2018-11-12 09:19 |
|
Rosetta-foldtree and docking by tingting » Tue, 2022-03-15 22:49 |
5 |
939 |
by aastha.pal Mon, 2022-06-27 09:55 |
|
Rosetta/PyRosetta on GPU by ac.research » Mon, 2017-11-06 05:18 |
1 |
3,864 |
by rmoretti Mon, 2017-11-06 07:36 |
|
Rosetta3 Tutorials by smlewis » Fri, 2011-11-18 07:33 |
8 |
16,020 |
by rmoretti Tue, 2019-07-09 10:24 |
|
Rosetta3 Tutorials Beta Release by smlewis » Fri, 2011-08-19 13:35 |
7 |
6,823 |
by smlewis Mon, 2014-04-21 06:47 |
|
Rosetta3.2 cluster application file-reading error by mdyini » Wed, 2011-03-09 16:59 |
3 |
5,080 |
by smlewis Mon, 2014-04-21 06:47 |
|
Rosetta3.3 enzyme_design errors by jtmacd » Wed, 2012-01-25 03:33 |
7 |
7,112 |
by rmoretti Mon, 2014-04-21 06:47 |
|
Rosetta3.5 src/core/pack/dunbrack/RotamerLibrary.cc permission problem by ytao » Fri, 2013-06-28 12:13 |
2 |
3,028 |
by ytao Mon, 2014-04-21 06:48 |
|
Rosetta: Clustering by sskim » Sat, 2016-06-11 14:44 |
1 |
1,752 |
by rmoretti Tue, 2016-07-12 08:36 |
|
Rosetta@cloud -- Macromolecular modeling in the cloud, Beta 1 is released! by xujc » Wed, 2012-10-24 11:15 |
0 |
3,955 |
by xujc Mon, 2014-04-21 06:47 |
|
rosetta@home in local PC farm by jarod » Wed, 2010-05-05 18:31 |
1 |
1,914 |
by smlewis Mon, 2014-04-21 06:47 |
|
RosettaCM density guided rebuilding methodology by ahmadkhalifa » Thu, 2018-08-30 06:45 |
4 |
2,598 |
by ahmadkhalifa Thu, 2018-08-30 23:09 |
|
RosettaCM rename or swap the order of sequences in your alignment file by ahmadkhalifa » Fri, 2017-12-22 08:42 |
4 |
3,064 |
by rmoretti Mon, 2018-01-15 15:24 |
|
RosettaCM: "Ligands must be added to all templates" by lanselibai » Tue, 2021-06-22 10:42 |
2 |
848 |
by lanselibai Wed, 2021-06-23 13:21 |
|
RosettaCM: adding constraints while keeping AUTO constraints by Michele.Bonus » Sun, 2020-08-30 10:42 |
2 |
1,358 |
by Michele.Bonus Sun, 2020-08-30 23:06 |
|
RosettaCM: help to generate similar models as those from Robetta Server by haom » Wed, 2020-09-09 09:19 |
0 |
764 |
by haom Wed, 2020-09-09 09:19 |
|
RosettaCM: threading okay, but hybridize loses many secondary structure by lanselibai » Wed, 2021-06-23 13:51 |
2 |
852 |
by lanselibai Thu, 2021-06-24 10:16 |
|
RosettaDesign by ac.research » Sun, 2019-07-21 01:20 |
2 |
2,597 |
by ac.research Sat, 2019-08-03 08:12 |
|
RosettaDesign improvements by ac.research » Mon, 2018-05-14 08:27 |
0 |
899 |
by ac.research Mon, 2018-05-14 08:27 |
|
RosettaDesign Server, reproducing optimized interface conformation by AlexanderMetz » Thu, 2012-02-09 10:41 |
1 |
3,067 |
by smlewis Mon, 2014-04-21 06:47 |
|
RosettaDock decoys recoring with ZRANK by cheyuk » Fri, 2014-04-11 01:40 |
5 |
7,101 |
by rmoretti Thu, 2016-04-28 15:53 |
|
RosettaDock-3.2 output by Zjq1998 » Wed, 2022-06-15 23:54 |
0 |
254 |
by Zjq1998 Wed, 2022-06-15 23:54 |
|
RosettaDock-4.0 score term by Zjq1998 » Wed, 2022-06-29 22:07 |
3 |
716 |
by ssrb Tue, 2022-07-05 11:07 |
|
RosettaDOM by ndousis » Sun, 2010-12-12 01:08 |
2 |
2,795 |
by ndousis Mon, 2014-04-21 06:47 |
|
RosettaHoles by ge0rgekh0ury » Mon, 2012-01-09 09:01 |
6 |
5,420 |
by Anonymous Mon, 2014-04-21 06:47 |
|
RosettaHoles in 3.1 by enoee » Thu, 2010-10-14 07:12 |
1 |
2,152 |
by smlewis Mon, 2014-04-21 06:47 |
|
RosettaHoles? by kbala » Thu, 2009-07-30 16:52 |
3 |
3,293 |
by smlewis Mon, 2014-04-21 06:47 |
|
RosettaMatch by jtmacd » Wed, 2012-01-11 06:50 |
5 |
8,878 |
by jtmacd Mon, 2014-04-21 06:47 |
|
RosettaMatch in 3.2 by jtmacd » Mon, 2010-12-20 08:04 |
4 |
4,429 |
by jtmacd Mon, 2014-04-21 06:47 |
|
RosettaMatch in Rosetta3.2? by SenyorDrew » Fri, 2010-08-13 07:47 |
1 |
2,494 |
by smlewis Mon, 2014-04-21 06:47 |
|
RosettaMatch Problem by David » Tue, 2019-01-22 12:23 |
0 |
1,497 |
by David Tue, 2019-01-22 12:23 |
|
RosettaProtein_Docking by khadkab@mcmaster.ca » Tue, 2015-06-30 11:28 |
1 |
2,803 |
by rmoretti Fri, 2015-07-03 13:24 |
|
rosettaremodel by berk » Fri, 2013-06-07 00:42 |
3 |
2,876 |
by jadolfbr Mon, 2014-04-21 06:48 |
|
RosettaRemodel by berk » Wed, 2013-07-10 11:21 |
2 |
2,384 |
by jadolfbr Mon, 2014-04-21 06:48 |
|
RosettaRemodel gives no increased output when setting higher -num_trajectory by JW_24 » Tue, 2020-09-22 11:49 |
2 |
1,210 |
by JW_24 Wed, 2020-09-23 01:27 |
|
rosettaScore.py has a typo, I think. Can I fix it in my own copy? by mdeklotz » Thu, 2018-08-02 15:15 |
4 |
2,808 |
by rmoretti Fri, 2018-08-03 11:39 |
|
Rosettascript - change residue number and chain ID by cttm4a1 » Wed, 2022-09-14 23:40 |
0 |
183 |
by cttm4a1 Wed, 2022-09-14 23:40 |
|
rosettautil module not imported cleanly by python scripts by franfdez » Tue, 2013-08-27 01:25 |
1 |
2,729 |
by rmoretti Mon, 2014-04-21 06:48 |
|
RosettaVIP by nick.polizzi » Tue, 2013-08-06 15:13 |
8 |
6,597 |
by rmoretti Mon, 2014-04-21 06:48 |
|
rosetta_scripts_BOGUS coords warning message by Karol » Tue, 2016-12-13 02:35 |
5 |
4,591 |
by Karol Thu, 2016-12-15 01:35 |
|
Rotamer Library Generation in Rosetta3 by jcminerlanl » Wed, 2016-11-30 07:34 |
5 |
4,812 |
by rmoretti Tue, 2021-02-09 11:52 |
|
Rotate chain by Germanico » Sun, 2021-05-09 16:36 |
3 |
1,321 |
by danpf Mon, 2021-05-10 10:04 |
|
Rotate MOVER by gw » Wed, 2012-08-15 12:09 |
5 |
4,703 |
by glemmon Mon, 2014-04-21 06:47 |
|
rs filter for terms in .sc files by gw » Sat, 2012-08-18 16:20 |
4 |
4,157 |
by gw Mon, 2014-04-21 06:47 |
|
Run PackRotamersMover on specified rotamer set by pachecoj » Mon, 2014-11-10 06:51 |
2 |
2,452 |
by pachecoj Tue, 2014-11-11 19:30 |
|
Run protein-protein docking parallelly by mpi by Zehui Zhou » Thu, 2023-02-02 06:23 |
3 |
138 |
by Zehui Zhou Fri, 2023-02-03 05:51 |
|
run Rosetta under windows prompt by skipper » Fri, 2013-12-20 21:16 |
3 |
3,858 |
by rmoretti Mon, 2014-04-21 06:48 |
|
run:test_cycles by ramin » Sun, 2013-03-10 11:05 |
1 |
1,835 |
by smlewis Mon, 2014-04-21 06:47 |
|
Running a ReportFSC mover between two .mrc maps by ahmadkhalifa » Mon, 2018-03-12 07:52 |
9 |
4,906 |
by brandon.frenz Tue, 2018-03-20 10:28 |
|
Running Backrub by enoee » Wed, 2010-10-27 07:51 |
1 |
1,938 |
by smlewis Mon, 2014-04-21 06:47 |
|
Running CstFileToTheozyme for Mono-Atomic Metal by Jhreed » Fri, 2016-07-08 13:43 |
0 |
1,077 |
by Jhreed Fri, 2016-07-08 13:44 |
|
running ROBETTA protocol for proteins >1000 aa long by tevang » Thu, 2010-07-15 07:09 |
0 |
1,384 |
by tevang Mon, 2014-04-21 06:47 |
|
running Rosetta locally using commands generated by the Robetta web server by cneale » Sat, 2014-03-15 11:48 |
3 |
3,732 |
by cneale Fri, 2014-03-21 18:13 |
|
running Rosetta with MPI by rohi » Sat, 2020-09-05 16:06 |
1 |
1,186 |
by rmoretti Tue, 2021-02-09 13:44 |
|
Running RosettaScripts, but got an error "src/utility/options/OptionCollection.cc, line 1153, No values of the appropriate type" by zhoubin » Sun, 2021-02-28 08:51 |
3 |
1,322 |
by zhoubin Mon, 2021-03-01 22:11 |
|
Running the Matcher on multiple PDBs by Jhreed » Thu, 2016-02-18 08:50 |
1 |
1,770 |
by rmoretti Sun, 2016-02-21 06:38 |
|
Running time of Rosetta/FlexPepDock by gerdos » Thu, 2015-10-15 02:14 |
2 |
2,292 |
by gerdos Fri, 2015-10-16 03:01 |
Log in to post new content in the forum.
