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Rosetta 3 - General

Topic / Topic starter Replies Views Last postsort ascending
Normal topic Homology modeling starter script
by gobli033 » Thu, 2010-04-01 07:27
0
1,221 by gobli033
Mon, 2014-04-21 06:47
Normal topic To smlewis............parallel job submission
by anusmita_sahoo » Mon, 2010-04-19 22:28
0
1,230 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic benchmark for rosetta3.1
by anusmita_sahoo » Tue, 2010-05-04 22:05
0
1,189 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic How to obtain alignment file for comparative modeling under Rosetta 3.1?
by lennylv » Tue, 2010-05-25 01:29
11
14,698 by sabine
Mon, 2014-04-21 06:47
Normal topic max_nn
by anusmita_sahoo » Thu, 2010-03-11 02:21
1
1,555 by smlewis
Mon, 2014-04-21 06:47
Normal topic generate full atom coordinates with abinitio rosetta structure prediction
by anusmita_sahoo » Tue, 2010-03-30 00:11
2
2,562 by Trentage
Mon, 2014-04-21 06:47
Normal topic scoring function changed from 2.3?
by jarod » Mon, 2010-04-12 18:56
1
1,534 by smlewis
Mon, 2014-04-21 06:47
Normal topic homo-oligomeric proteins.............folddock+symmetry+abinito
by anusmita_sahoo » Thu, 2010-04-29 02:59
2
3,007 by biofisikx
Mon, 2014-04-21 06:47
Normal topic generating 10 lowest energy structures from abinitio
by isengupta13 » Fri, 2010-05-07 11:44
2
2,027 by ndousis
Mon, 2014-04-21 06:47
Normal topic Clustering TM domain of transmembrane protein
by justin » Sun, 2010-03-21 23:26
0
1,204 by justin
Mon, 2014-04-21 06:47
Normal topic problems in building rosetta3.1 (solved)
by zpliu09 » Wed, 2010-03-31 02:03
1
1,563 by smlewis
Mon, 2014-04-21 06:47
Normal topic 3D Structure Prediction
by anirbanzz » Sat, 2010-04-17 02:47
1
2,142 by smlewis
Mon, 2014-04-21 06:47
Normal topic Fix missing backbone residues
by Matthys » Mon, 2010-05-03 09:03
2
2,993 by Matthys
Mon, 2014-04-21 06:47
Normal topic Fold tree error
by mansi » Tue, 2010-05-18 07:43
2
3,193 by mansi
Mon, 2014-04-21 06:47
Normal topic Scoring Centroid Structures
by Trentage » Sun, 2010-03-28 19:21
0
1,587 by Trentage
Mon, 2014-04-21 06:47
Normal topic relax NOT CONVERGED
by albumns » Thu, 2010-06-24 21:25
3
2,608 by smlewis
Mon, 2014-04-21 06:47
Normal topic problems with cluster program
by umeshghosh » Thu, 2010-04-08 07:45
1
2,042 by smlewis
Mon, 2014-04-21 06:47
Normal topic Cluster Error
by justin » Mon, 2010-04-26 00:06
2
2,343 by justin
Mon, 2014-04-21 06:47
Normal topic what is the relationship and difference between Rosetta 3.0 and miniRosetta
by jarod » Thu, 2010-05-06 20:57
2
2,277 by jarod
Mon, 2014-04-21 06:47
Normal topic "CEN" atom in the pdb file
by wszjzhang » Wed, 2010-03-17 14:35
3
3,833 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic Rosetta dock parallel
by mahajanr » Tue, 2010-06-01 16:04
3
3,475 by smlewis
Mon, 2014-04-21 06:47
Normal topic Problem creating pNNMAKE.gnu
by anirbanzz » Sat, 2010-04-17 02:14
3
3,386 by monica0569
Mon, 2014-04-21 06:47
Normal topic total score
by score » Mon, 2010-05-03 02:03
1
1,866 by smlewis
Mon, 2014-04-21 06:47
Normal topic CS-Rosetta fragments
by isengupta13 » Sun, 2010-05-16 08:08
1
2,285 by AndrewBworth
Mon, 2014-04-21 06:47
Normal topic About generating Fullatom structures
by wszjzhang » Wed, 2010-03-24 19:27
1
1,617 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic how to build homology based models?
by albumns » Thu, 2010-06-24 10:27
0
1,224 by albumns
Mon, 2014-04-21 06:47
Normal topic How do the homology sequences exclude from fragment files?
by exchhattu » Mon, 2010-04-05 03:04
1
1,619 by smlewis
Mon, 2014-04-21 06:47
Normal topic Problem running make_fragments.pl script
by anirbanzz » Thu, 2010-04-22 01:27
0
1,484 by anirbanzz
Mon, 2014-04-21 06:47
Normal topic Building Rosetta PROBLEM
by nunesjulioc » Fri, 2010-02-26 06:03
1
1,576 by smlewis
Mon, 2014-04-21 06:47
Normal topic About Rosetta Scoring Function
by wszjzhang » Wed, 2010-02-03 09:22
1
1,952 by smlewis
Mon, 2014-04-21 06:47
Normal topic rerun same experiment on MPI.
by exchhattu » Tue, 2010-02-23 21:14
7
5,693 by exchhattu
Mon, 2014-04-21 06:47
Normal topic how to use rosettadesign to do mutations on protein structure
by lqzhang » Thu, 2010-03-04 07:43
3
3,417 by vanita
Mon, 2014-04-21 06:47
Normal topic docking using rosetta3.1 and rosetta2.3 leads to very different results
by lqzhang » Thu, 2010-01-14 11:54
1
1,676 by sid
Mon, 2014-04-21 06:47
Normal topic Compilation error
by zgcarvalho » Fri, 2010-02-12 06:58
1
1,580 by smlewis
Mon, 2014-04-21 06:47
Normal topic loop remodelling with a fixed bound DNA
by jtmacd » Thu, 2010-02-25 03:23
8
5,119 by jtmacd
Mon, 2014-04-21 06:47
Normal topic new installation on local computer problem
by lqzhang » Mon, 2010-02-01 08:41
1
1,511 by smlewis
Mon, 2014-04-21 06:47
Normal topic building a 77 aa long protein fragment
by tevang » Sat, 2010-02-20 11:37
8
5,984 by gsmurphy
Mon, 2014-04-21 06:47
Normal topic runtime error
by exchhattu » Wed, 2010-03-03 02:54
2
1,996 by exchhattu
Mon, 2014-04-21 06:47
Normal topic mcm for Docking in Rosetta3.1
by dyq » Tue, 2010-01-12 13:44
1
1,846 by smlewis
Mon, 2014-04-21 06:47
Normal topic Explanations to membrane_abinitio options
by justin » Wed, 2010-02-10 01:14
3
2,584 by justin
Mon, 2014-04-21 06:47
Normal topic shockingly low fragment diversity ___nnmake failed
by anusmita_sahoo » Wed, 2010-03-10 21:15
0
1,201 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic have trouble with "relax" models
by wszjzhang » Thu, 2010-01-28 10:02
1
1,693 by smlewis
Mon, 2014-04-21 06:47
Normal topic Compilation in Mac OS 10.6
by rjn » Thu, 2010-02-18 12:35
1
1,818 by smlewis
Mon, 2014-04-21 06:47
Normal topic Building Rosetta 3.1 for cs-Rosetta
by zdn3023 » Fri, 2010-02-26 14:31
2
2,337 by zdn3023
Mon, 2014-04-21 06:47
Normal topic how to use backrub in rosetta3.1
by lqzhang » Mon, 2010-01-11 14:43
3
2,629 by smlewis
Mon, 2014-04-21 06:47
Normal topic Relax structure using Membrane Environment Scoring Function
by anna.duncan » Thu, 2010-02-04 08:01
6
6,793 by jruhym
Mon, 2014-04-21 06:47
Normal topic NOE constraints with Rosetta 3.1
by mpiuzzi » Wed, 2010-02-24 02:40
3
2,795 by mpiuzzi
Mon, 2014-04-21 06:47
Normal topic Using Patches in Rosetta
by JS » Wed, 2010-03-10 13:32
6
6,685 by JS
Mon, 2014-04-21 06:47
Normal topic Derivative of the Energy function?
by MkM » Fri, 2010-01-15 08:00
1
1,920 by smlewis
Mon, 2014-04-21 06:47
Normal topic all-atom refinement with Relax application
by zwenthor » Mon, 2010-02-15 22:45
2
2,240 by zwenthor
Mon, 2014-04-21 06:47
Normal topic using constraints with AbinitioRelax (Rosetta 3.1)
by ndousis » Fri, 2009-12-18 08:56
8
6,891 by ndousis
Mon, 2014-04-21 06:47
Normal topic Citing Rosetta3.0
by ctaylor » Fri, 2009-10-09 11:42
1
4,273 by smlewis
Mon, 2014-04-21 06:47
Normal topic how to do ensemble docking using rosetta3.1
by lqzhang » Mon, 2010-01-11 10:31
1
1,689 by sid
Mon, 2014-04-21 06:47
Normal topic Error in RMSD calculation when native sequence deviates
by abdullah » Tue, 2009-11-10 08:56
1
2,103 by smlewis
Mon, 2014-04-21 06:47
Normal topic Ab Initio folding of protein with multiple chains?
by myang » Tue, 2009-11-24 13:01
0
1,267 by myang
Mon, 2014-04-21 06:47
Normal topic Parallel Installation of ROSETTA3.1
by anirbanzz » Mon, 2009-12-07 21:09
1
1,718 by smlewis
Mon, 2014-04-21 06:47
Normal topic Clustering Poses from RosettaDock
by ctaylor » Tue, 2009-12-29 06:38
0
1,209 by ctaylor
Mon, 2014-04-21 06:47
Normal topic Problems in Loop Modeling
by jklett » Mon, 2009-10-19 07:26
2
2,593 by jklett
Mon, 2014-04-21 06:47
Normal topic how same random seeds can be used in rosetta for mpi run.
by exchhattu » Wed, 2009-10-28 22:09
1
2,203 by smlewis
Mon, 2014-04-21 06:47
Normal topic Could somebody interpret the rosetta's cluster application result?
by exchhattu » Mon, 2009-11-16 01:58
0
1,314 by exchhattu
Mon, 2014-04-21 06:47
Normal topic the problem in making fragments
by croshong » Thu, 2009-12-03 17:15
1
2,041 by smlewis
Mon, 2014-04-21 06:47
Normal topic RNA & protein folding
by sdh » Thu, 2009-12-17 00:58
0
1,265 by sdh
Mon, 2014-04-21 06:47
Normal topic Resfile for fixed backbone design
by dyq » Wed, 2009-10-07 10:50
5
4,110 by attesor
Mon, 2014-04-21 06:47
Normal topic Can Rosetta generate proteins with sidechains ?
by wszjzhang » Fri, 2010-01-08 08:26
1
1,755 by smlewis
Mon, 2014-04-21 06:47
Normal topic Intel Compiler and OS X Intel
by bene » Tue, 2009-10-20 10:20
1
2,018 by smlewis
Mon, 2014-04-21 06:47
Normal topic the meaning of "maxsub" in score.fsc
by exchhattu » Tue, 2009-11-10 04:37
2
2,848 by smlewis
Mon, 2014-04-21 06:47
Normal topic (eliminated)
by jiyongpark.77 » Tue, 2009-11-24 00:56
0
1,269 by jiyongpark.77
Mon, 2014-04-21 06:47
Normal topic 3.1 CLUSTERING OUTPUT
by w107kdk » Mon, 2009-12-07 13:10
0
1,393 by w107kdk
Mon, 2014-04-21 06:47
Normal topic Silent Files
by ctaylor » Tue, 2009-12-22 09:22
3
2,635 by smlewis
Mon, 2014-04-21 06:47
Normal topic How to use Rosetta 3.1 to model the structure of an antibody?
by sylvia » Mon, 2009-10-26 14:06
2
2,725 by vanita
Mon, 2014-04-21 06:47
Normal topic Rosetta and SAM 3.5!
by wtscrystal » Sat, 2009-11-14 22:49
0
1,628 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic compile make_fragments.pl
by justin » Wed, 2009-12-02 00:42
0
1,246 by justin
Mon, 2014-04-21 06:47
Normal topic ab initio protein structure prediction
by croshong » Wed, 2009-12-16 23:25
1
1,716 by smlewis
Mon, 2014-04-21 06:47
Normal topic should rosetta3.1 do prepacking before docking?
by lqzhang » Thu, 2010-01-07 12:15
3
2,593 by smlewis
Mon, 2014-04-21 06:47
Normal topic Site-wide installations and 64-bit builds
by bene » Tue, 2009-10-20 10:16
1
1,572 by smlewis
Mon, 2014-04-21 06:47
Normal topic Does Rosetta 3.1 have the 9999 limitation?
by wtscrystal » Sat, 2009-11-07 01:18
1
1,726 by smlewis
Mon, 2014-04-21 06:47
Normal topic Webinar?
by IgaK » Thu, 2009-11-19 03:26
0
1,213 by IgaK
Mon, 2014-04-21 06:47
Normal topic Loop modeling FLAGS
by jklett » Fri, 2009-12-04 02:45
3
2,669 by jklett
Mon, 2014-04-21 06:47
Normal topic Loop Modeling
by ctaylor » Fri, 2009-12-18 11:42
3
2,633 by ctaylor
Mon, 2014-04-21 06:47
Normal topic Linker problems when building mini
by assaff » Mon, 2009-10-12 01:07
6
4,120 by smlewis
Mon, 2014-04-21 06:47
Normal topic Quesition about Relax Mode
by crysta11 » Wed, 2009-10-21 09:57
3
2,866 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta Dock
by swoody » Tue, 2009-11-10 16:20
1
2,431 by smlewis
Mon, 2014-04-21 06:47
Normal topic manually changing fixbb residue ref energies
by jtmacd » Wed, 2009-11-25 08:43
4
3,102 by jtmacd
Mon, 2014-04-21 06:47
Normal topic membrane modeling error!
by wtscrystal » Wed, 2009-12-09 21:28
3
4,343 by arthuc01
Mon, 2014-04-21 06:47
Normal topic Only 430 models are generated for membrane prediction
by justin » Wed, 2010-01-06 00:04
3
2,754 by smlewis
Mon, 2014-04-21 06:47
Normal topic Checkpoints in Rosetta
by exchhattu » Mon, 2009-10-19 17:47
2
2,326 by exchhattu
Mon, 2014-04-21 06:47
Normal topic rosetta 3.1-how to run parallel tasks?
by wtscrystal » Fri, 2009-11-06 03:23
4
4,692 by lqzhang
Mon, 2014-04-21 06:47
Normal topic Rosetta membrane prediction!
by wtscrystal » Tue, 2009-11-17 05:55
0
2,029 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic activation of filters in rosetta3.0 or later
by exchhattu » Thu, 2009-12-03 17:52
2
2,127 by exchhattu
Mon, 2014-04-21 06:47
Hot topic SCons compilation error (Windows XP, 32bit)
by CRickert » Mon, 2009-08-03 00:57
28
19,071 by Marsia
Mon, 2014-04-21 06:47
Normal topic Problems in installing Rosetta3 in Red Hat Linux
by jjz2009 » Mon, 2009-08-24 19:16
1
1,711 by smlewis
Mon, 2014-04-21 06:47
Normal topic make_fragments
by ctaylor » Mon, 2009-09-21 12:41
2
2,231 by ctaylor
Mon, 2014-04-21 06:47
Normal topic Rosetta 3.1 seg faults gcc while compiling on Fedora 11
by jtmacd » Fri, 2009-10-02 05:26
1
1,832 by smlewis
Mon, 2014-04-21 06:47
Normal topic energy units
by jtmacd » Mon, 2009-07-06 10:39
1
3,189 by smlewis
Mon, 2014-04-21 06:47
Normal topic Public subversion / Enzyme design public app
by weallen » Tue, 2009-08-11 20:50
6
4,193 by weallen
Mon, 2014-04-21 06:47
Normal topic Intermediate file insertion
by exchhattu » Wed, 2009-09-02 18:44
2
2,052 by exchhattu
Mon, 2014-04-21 06:47
Normal topic ClusterApp hogs way too much memory...
by IgaK » Tue, 2009-09-29 00:14
5
3,708 by w107kdk
Mon, 2014-04-21 06:47
Normal topic RosettaHoles?
by kbala » Thu, 2009-07-30 16:52
3
2,960 by smlewis
Mon, 2014-04-21 06:47
Normal topic Homology modeling
by mchldln » Mon, 2009-08-17 13:04
2
3,045 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta on snow leopard?
by nitroamos » Thu, 2009-10-01 17:07
3
3,926 by nitroamos
Mon, 2014-04-21 06:47
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