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Rosetta 3 - General

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Normal topic what is the xxx.static.linuxgccrelease?
by syoifczeri » Sat, 2015-10-31 04:09
2
5,414 by syoifczeri
Mon, 2015-11-02 03:59
Normal topic What is virtual atom means in a params file and how to generate it?
by JasonIsaac » Fri, 2022-11-04 04:53
4
522 by JasonIsaac
Mon, 2022-11-07 19:15
Normal topic what kind of focefield does Rosetta based on?
by albumns » Tue, 2010-07-06 11:08
1
1,919 by smlewis
Mon, 2014-04-21 06:47
Normal topic what option should I use if I want to use the dfire in 3.4
by Lindsay » Thu, 2012-04-12 05:19
3
3,321 by smlewis
Mon, 2014-04-21 06:47
Normal topic what rotamer lib is used in rosetta3.5?
by Lindsay » Thu, 2014-02-06 16:11
6
5,556 by rmoretti
Fri, 2014-03-28 09:03
Normal topic What should I do to lower down the fa_sol scores?
by JasonIsaac » Mon, 2022-12-05 18:57
0
288 by JasonIsaac
Mon, 2022-12-05 18:57
Normal topic What's a good application to thread a sequence over a peptide (of a peptide-protein complex) and minimize?
by brspurri » Tue, 2013-02-12 08:19
6
6,511 by smlewis
Mon, 2014-04-21 06:47
Normal topic what's the difference between recovery and sequence identity
by Lindsay » Thu, 2012-04-26 05:46
3
4,158 by smlewis
Mon, 2014-04-21 06:47
Normal topic What's the unit of Rosetta energy function?
by Run » Tue, 2014-06-24 00:44
1
5,709 by rmoretti
Tue, 2014-07-01 12:45
Normal topic When does Rosetta switch from centroid to FA mode?
by MarkW » Fri, 2015-07-03 04:48
3
3,114 by rmoretti
Sun, 2015-07-05 14:28
Normal topic where do new .params files go?
by einew » Wed, 2011-01-05 12:09
1
2,155 by smlewis
Mon, 2014-04-21 06:47
Normal topic where is PyIgClassfiy.py ?
by mxp » Tue, 2020-07-07 23:57
2
1,348 by mxp
Wed, 2020-07-08 23:25
Normal topic Where is Sicdock application now? Can I find a substitute?
by JasonIsaac » Sun, 2022-11-13 03:41
3
385 by rmoretti
Mon, 2022-11-14 07:27
Normal topic Where is the flag -preserve_input_cb?
by mdyini » Wed, 2011-03-09 14:40
1
1,756 by smlewis
Mon, 2014-04-21 06:47
Normal topic Where to find old version of Rosetta with git version number
by mao_x » Wed, 2019-08-07 01:22
2
1,939 by mao_x
Thu, 2019-08-08 01:37
Normal topic Which application/mover should I use to evaluate the ddg between apo enzyme and enzyme binding with transition state?
by JasonIsaac » Wed, 2023-02-22 18:36
0
186 by JasonIsaac
Wed, 2023-02-22 18:36
Normal topic which make_fragments.pl
by renedominik » Mon, 2018-06-04 08:58
2
2,691 by renedominik
Sat, 2018-07-07 03:03
Normal topic which modules support MPI now?
by albumns » Fri, 2013-11-08 01:32
1
1,933 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Which rosetta for antibody modelling?
by oppopomoz » Wed, 2013-04-24 09:10
2
2,703 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Why are 'fa_rep' and 'fa_intra_rep' higher in 'ref2015_soft.wts' than in 'ref2015.wts'?
by JW_24 » Tue, 2023-01-24 04:40
2
204 by JW_24
Tue, 2023-01-24 14:52
Normal topic Why are all source codes .gz and not .tgz
by jasnyderjr » Tue, 2016-12-20 21:23
12
8,654 by smlewis
Thu, 2016-12-22 13:11
Normal topic why docking results are different?
by albumns » Sat, 2010-12-18 23:53
3
3,112 by smlewis
Mon, 2014-04-21 06:47
Normal topic Why does the sum of the per-residue total energy not match the whole score?
by matteoferla » Fri, 2021-07-09 08:36
2
1,086 by matteoferla
Mon, 2021-07-12 02:23
Normal topic why energy is positive?
by albumns » Tue, 2014-12-23 00:05
3
3,922 by rmoretti
Mon, 2015-02-09 11:21
Normal topic Why I have the different result with the same initial condition?
by mikelin » Sat, 2011-06-04 11:35
2
3,713 by JeffreyGray
Mon, 2014-04-21 06:47
Normal topic Why is it called Rosetta?
by cossio » Sun, 2016-03-13 14:28
1
1,729 by smlewis
Sun, 2016-03-13 15:25
Normal topic Why I_sc of Rosetta 2016.02 and 2018.21 are so different?
by eminegenetics » Mon, 2018-07-16 12:51
2
2,043 by eminegenetics
Wed, 2018-07-18 13:48
Normal topic why not scoring function in loop model?
by albumns » Thu, 2011-01-06 00:13
1
2,056 by smlewis
Mon, 2014-04-21 06:47
Normal topic Will Rosetta Flexpepdock be adequate for this for now.?
by monos_morpheus » Wed, 2011-04-27 19:10
1
2,327 by londonir
Mon, 2014-04-21 06:47
Normal topic Working through tutorials: expected output scorces differ from calculated results
by j.schmue » Sat, 2020-01-18 13:16
2
1,423 by j.schmue
Tue, 2020-01-28 13:31
Normal topic Write PDB with multiple side-chain configurations
by pachecoj » Tue, 2014-09-30 21:42
2
2,652 by pachecoj
Thu, 2014-10-09 18:15
Normal topic XML schema file taken from Rosie docking giving errors in Rosetta Scripts
by Delfosse57 » Mon, 2022-07-18 10:51
3
631 by rmoretti
Mon, 2022-07-18 11:56
Normal topic Your compiler does not have full support for C++ll regex, and therefore can't suport RegEx_based_CDR_Detector/antitody grafting.
by ldx022 » Thu, 2023-03-09 17:03
3
310 by ldx022
Sat, 2023-03-11 16:53
Normal topic [dev] determine which score_type's enabled in create_energy_method?
by ipetrik_ambry » Fri, 2017-10-27 15:37
3
2,329 by rmoretti
Mon, 2017-10-30 12:02
Normal topic [dev] examples for implementing setup_for_packing, prepare_rotamers_for_packing?
by ipetrik_ambry » Mon, 2017-10-30 17:03
0
931 by ipetrik_ambry
Mon, 2017-10-30 17:03
Normal topic [dev] not seeing energy in pose row for new energy term in design
by ipetrik_ambry » Fri, 2017-03-03 13:16
1
1,730 by ipetrik_ambry
Tue, 2017-03-14 14:09
Normal topic [dev] quickest way to determine bond distance between polymeric-bonded residues in Pose/Conformation
by ipetrik_ambry » Thu, 2018-01-18 12:26
1
1,425 by rmoretti
Tue, 2018-01-30 08:29
Normal topic [dev] Using h-bonding values in new energy term
by ipetrik_ambry » Wed, 2017-03-01 11:33
4
3,110 by ipetrik_ambry
Thu, 2017-03-02 15:35
Normal topic [Mover] is not known to the MoverFactory
by Jhreed » Fri, 2016-08-05 12:23
4
3,678 by msardejani
Sun, 2016-08-07 17:49
Normal topic ​​B​3​-protein design using rosettaScript movers
by straore » Mon, 2015-03-16 05:05
2
2,505 by straore
Fri, 2015-04-17 01:54

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