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Rosetta 3 - General
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Adding new files using rosetta classes went wrong by Jeremy1990 » Sun, 2015-04-26 01:07 |
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3,874 |
by rmoretti Thu, 2015-04-30 16:09 |
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Adding NCAA with Metal Ion by MustafaBughio » Mon, 2022-11-28 15:07 |
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842 |
by JasonIsaac Mon, 2022-12-05 18:41 |
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adding NCAA to the N-terminal of RCSB pdb by ate » Tue, 2021-06-08 08:24 |
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2,642 |
by Subhrodeep Saha Sat, 2021-06-19 07:17 |
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Adding centroid .params files for non-canonical residues based on all-atom .params files by jcminerlanl » Thu, 2017-04-27 09:28 |
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2,650 |
by vmulligan Thu, 2017-04-27 16:41 |
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Add hemes to cytochrome structures by BuddySphinx » Sun, 2018-12-16 13:46 |
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2,119 |
by rmoretti Fri, 2019-03-29 14:43 |
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Add a ligand with only one atom (i.e. Zn) to the RosettaCM by lanselibai » Tue, 2021-06-22 10:28 |
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2,758 |
by rmoretti Thu, 2021-06-24 12:23 |
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activation of filters in rosetta3.0 or later by exchhattu » Thu, 2009-12-03 17:52 |
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2,819 |
by exchhattu Mon, 2014-04-21 06:47 |
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Access sigma values for rotamers by pachecoj » Thu, 2014-05-15 07:10 |
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5,538 |
by rmoretti Sat, 2014-05-17 14:10 |
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acceptable RMSD value in the clustered structures? by ritacc18 » Wed, 2013-06-19 14:53 |
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9,094 |
by rmoretti Mon, 2014-04-21 06:48 |
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about the option -constraints:cst_fa_file & -constraints:cst_fa_weight by jiongzhang » Sat, 2010-12-25 12:55 |
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3,363 |
by smlewis Mon, 2014-04-21 06:47 |
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About RosettaScript examples by jiongzhang » Thu, 2012-03-08 10:50 |
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2,428 |
by smlewis Mon, 2014-04-21 06:47 |
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About Rosetta Scoring Function by wszjzhang » Wed, 2010-02-03 09:22 |
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2,449 |
by smlewis Mon, 2014-04-21 06:47 |
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about Residue Number in Rosetta by jiongzhang » Mon, 2012-06-11 14:58 |
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10,521 |
by smlewis Mon, 2014-04-21 06:47 |
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About generating Fullatom structures by wszjzhang » Wed, 2010-03-24 19:27 |
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2,129 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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about constraints by jiongzhang » Wed, 2011-02-23 15:59 |
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24,555 |
by rmoretti Wed, 2015-02-18 09:23 |
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About align hundreds of pdb structures produced by rosseta membrane abinitio by ritacc18 » Wed, 2013-05-22 12:37 |
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6,709 |
by ssrb Tue, 2015-09-22 08:35 |
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abnitio in only part of pdb and map fitting by tiagogomes89 » Mon, 2014-12-15 08:57 |
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1,556 |
by tiagogomes89 Mon, 2014-12-15 08:57 |
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abintio clustering - funnel plot by vamsi » Fri, 2011-03-25 09:18 |
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2,670 |
by smlewis Mon, 2014-04-21 06:47 |
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abinitiorelax: No funnel by cno » Tue, 2010-07-27 06:14 |
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5,672 |
by biofisikx Mon, 2014-04-21 06:47 |
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AbInitioRelax.mpi Hangs - Waiting for Job Request by nleroy » Thu, 2019-10-31 07:30 |
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2,200 |
by nleroy Fri, 2019-11-08 12:44 |
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AbinitioRelax with very small peptides by jamsmad » Tue, 2012-09-04 13:45 |
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9,560 |
by jamsmad Mon, 2014-04-21 06:47 |
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AbinitioRelax with restraints/constraints by jtmacd » Mon, 2011-07-11 07:07 |
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4,268 |
by jtmacd Mon, 2014-04-21 06:47 |
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AbinitioRelax using multiple cores on a single machine without mpi? by JoG » Tue, 2011-10-25 00:40 |
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11,840 |
by smlewis Mon, 2014-04-21 06:47 |
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AbinitioRelax under different directories without -constant_seed -jran flag by xpzhang » Wed, 2010-09-15 14:56 |
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7,665 |
by rmoretti Mon, 2014-04-21 06:47 |
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AbinitioRelax of RCSB PDB structures by ac.research » Tue, 2019-09-03 02:35 |
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1,613 |
by danpf Tue, 2019-09-03 10:39 |
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Abinitio Video by ac.research » Tue, 2017-09-12 04:00 |
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3,488 |
by ac.research Sun, 2017-09-24 11:25 |
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Abinitio Structure Prediction - Sanity Test by westleys » Tue, 2010-06-01 00:28 |
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3,089 |
by westleys Mon, 2014-04-21 06:47 |
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Abinitio starts at the 27th amino acid by JadAbbass » Thu, 2013-08-29 05:38 |
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3,739 |
by JadAbbass Mon, 2014-04-21 06:48 |
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Abinitio isolated by ac.research » Wed, 2018-04-04 07:36 |
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2,664 |
by smlewis Wed, 2018-04-04 10:42 |
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abinitio demo is not progressing - new install by jtpi6174 » Thu, 2022-03-24 03:49 |
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1,141 |
by jtpi6174 Thu, 2022-03-24 09:43 |
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Abinitio Calculations - typical parameters by vamsi » Thu, 2010-11-11 07:06 |
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6,002 |
by smlewis Mon, 2014-04-21 06:47 |
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abinitio - is there a way to limit number of CPU cores the program uses? by burkheadlab » Mon, 2011-05-09 16:37 |
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4,720 |
by smlewis Mon, 2014-04-21 06:47 |
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ab inito memberane error by albumns » Mon, 2011-02-14 10:58 |
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8,095 |
by albumns Mon, 2014-04-21 06:47 |
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Ab initio/relax flag file setup by w107kdk » Fri, 2009-08-28 11:49 |
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4,700 |
by w107kdk Mon, 2014-04-21 06:47 |
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AB INITIO WITH METALLOPROTEIN by kaue » Sun, 2012-06-17 14:04 |
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12,691 |
by masterofpuppets Tue, 2015-02-10 01:33 |
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Ab initio structure prediction for long amino acid sequence by maruhuang » Fri, 2019-08-02 03:38 |
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3,086 |
by maruhuang Thu, 2019-09-26 18:55 |
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Ab Initio structure prediction by abhishek » Tue, 2009-04-21 23:37 |
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1,653 |
by abhishek Mon, 2014-04-21 06:47 |
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ab initio structure modeling by pci112 » Mon, 2021-04-12 08:07 |
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922 |
by pci112 Mon, 2021-04-12 08:12 |
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ab initio struction prediction by Negarsardar » Mon, 2018-08-06 15:50 |
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1,644 |
by smlewis Tue, 2018-08-07 16:59 |
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ab initio protein structure prediction by croshong » Wed, 2009-12-16 23:25 |
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2,246 |
by smlewis Mon, 2014-04-21 06:47 |
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Ab Initio Modelling of Protein with Small-Molecule Cofactor by jurkm » Thu, 2011-03-10 06:56 |
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16,281 |
by jseco Mon, 2021-03-08 03:46 |
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Ab Initio large threshold for clustering by Swillard » Mon, 2018-11-12 14:14 |
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1,670 |
by rmoretti Wed, 2018-11-21 14:01 |
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ab initio folding part of a protein by attesor » Wed, 2013-03-06 04:39 |
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2,282 |
by smlewis Mon, 2014-04-21 06:47 |
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Ab Initio folding of protein with multiple chains? by myang » Tue, 2009-11-24 13:01 |
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1,646 |
by myang Mon, 2014-04-21 06:47 |
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a question about protein-ligand docking in generating 1SW2 conformers by Ryhon Wang » Wed, 2014-05-28 22:27 |
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3,513 |
by rmoretti Tue, 2014-06-03 11:45 |
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A question about Multiple constraints by kxiao » Mon, 2014-06-16 07:02 |
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7,375 |
by masterofpuppets Fri, 2014-12-19 08:30 |
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a question about loop refinement by albumns » Fri, 2012-03-02 09:38 |
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5,547 |
by albumns Mon, 2014-04-21 06:47 |
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4mer 6mer fragment database by bjharris » Wed, 2020-09-09 15:12 |
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1,822 |
by bjharris Wed, 2020-09-09 20:04 |
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3D Structure Prediction by anirbanzz » Sat, 2010-04-17 02:47 |
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2,722 |
by smlewis Mon, 2014-04-21 06:47 |
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3.1 CLUSTERING OUTPUT by w107kdk » Mon, 2009-12-07 13:10 |
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1,754 |
by w107kdk Mon, 2014-04-21 06:47 |
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-RBSegmentRelax:cst_wt not present in ca_to_allatom.linuxgccrelease application? by Karol » Thu, 2016-05-12 06:30 |
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2,659 |
by Karol Thu, 2016-05-12 07:58 |
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-loops:refine_repack_cycles option not accepted by loopmodel.linuxgccrelease by tsjain » Tue, 2013-02-05 18:47 |
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3,906 |
by tsjain Mon, 2014-04-21 06:47 |
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-ignore_unrecognized_res doesn't work by e3lm » Fri, 2022-05-06 14:47 |
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1,263 |
by e3lm Fri, 2022-05-06 16:10 |
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-fake_native Error - not found in command line of rosetta 3.2.1 by vsjasion » Wed, 2011-10-05 12:01 |
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3,355 |
by vsjasion Mon, 2014-04-21 06:47 |
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-dock_pert problem by mahajanr » Mon, 2010-07-19 15:45 |
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11,084 |
by weitzner Mon, 2014-04-21 06:47 |
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'-norepack_disulf' flag NOT work in Ligand-protein docking ? by darlintai » Tue, 2011-01-11 22:21 |
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6,285 |
by smlewis Mon, 2014-04-21 06:47 |
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# decoys of silent by fred » Wed, 2014-04-02 06:00 |
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3,526 |
by fred Fri, 2014-04-04 11:34 |
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"unrecognized aa ACT" by einew » Sat, 2011-08-27 14:58 |
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2,542 |
by smlewis Mon, 2014-04-21 06:47 |
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"Rosetta predictions of density, heat of vaporization (∆Hvap) and heat capacity (Cp(l))" by matteoferla » Tue, 2020-07-14 01:51 |
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1,112 |
by matteoferla Tue, 2020-07-14 01:51 |
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"Local sequence-structure compatability" in "design of ideal protein structures" by petrikigor » Sun, 2012-12-02 09:25 |
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3,164 |
by petrikigor Mon, 2014-04-21 06:47 |
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"Illegal Instruction" for particular Movers/Filters by Jhreed » Thu, 2016-08-11 12:59 |
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2,251 |
by smlewis Thu, 2016-08-11 13:16 |
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"CEN" atom in the pdb file by wszjzhang » Wed, 2010-03-17 14:35 |
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4,804 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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"caught exception" for PDB with membrane "DUM" residues by nitroamos » Wed, 2018-05-30 08:35 |
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3,841 |
by Awagner7 Tue, 2020-04-28 10:51 |
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"abinitio" with mpi by al614 » Wed, 2016-10-12 12:17 |
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2,317 |
by rmoretti Fri, 2016-10-14 15:46 |
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Rosetta remodelling - how to change the added residue type instead of just VAL by xuezhi » Wed, 2023-02-15 14:00 |
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418 |
by xuezhi Wed, 2023-02-15 14:00 |
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positive results in total_score by symmetry docking by Jacob » Thu, 2011-06-16 05:18 |
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3,505 |
by rmoretti Mon, 2014-04-21 06:47 |
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No structure mods allowed during scoring! error by jadolfbr » Wed, 2013-12-04 14:06 |
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3,250 |
by jadolfbr Mon, 2014-04-21 06:48 |
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modified Serine: FoldTree::reorder( 1 ) failed, new/old edge_list_ size mismatch error by Karol » Wed, 2016-05-04 08:47 |
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16,322 |
by smlewis Tue, 2016-05-17 08:06 |
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InterfaceDdGMover and ResfileReader by asaf.farhi » Wed, 2022-04-13 15:05 |
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812 |
by asaf.farhi Wed, 2022-04-13 15:05 |
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ERROR:: Exit from: src/core/fragment/ConstantLengthFragSet.cc line: 116 by phanvy » Wed, 2014-10-08 22:28 |
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3,081 |
by phanvy Wed, 2014-10-15 21:41 |
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AtomPair and SPLINE by attesor » Sat, 2015-06-20 11:42 |
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3,875 |
by attesor Thu, 2015-10-22 03:42 |
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(eliminated) by jiyongpark.77 » Tue, 2009-11-24 00:56 |
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1,625 |
by jiyongpark.77 Mon, 2014-04-21 06:47 |
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Does Rosetta have a separate refinement function? by ylwang » Tue, 2019-09-24 19:08 |
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2,022 |
by ylwang Tue, 2019-10-08 18:34 |
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