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Rosetta 3 - General

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Normal topic protein location change during Docking protocol
by Hyun » Tue, 2022-03-29 19:53
0
368 by Hyun
Tue, 2022-03-29 19:53
Normal topic RosettaDock-3.2 output
by Zjq1998 » Wed, 2022-06-15 23:54
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360 by Zjq1998
Wed, 2022-06-15 23:54
Normal topic Designing Feasible Backbones
by csvajda » Sat, 2022-08-13 08:08
0
360 by csvajda
Sat, 2022-08-13 08:08
Normal topic Antigen-antibody modeling
by aastha.pal » Mon, 2022-06-27 09:34
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359 by aastha.pal
Mon, 2022-06-27 09:34
Normal topic Should all input structures to energy_based_clustering have an output pdb file?
by Brian Wiley » Mon, 2023-01-30 20:42
2
359 by Brian Wiley
Tue, 2023-01-31 19:08
Normal topic Porblem with Rosetta Homology Modelling
by Karthik » Wed, 2022-07-13 23:45
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358 by Karthik
Wed, 2022-07-13 23:45
Normal topic How to add new Movers to Rosetta
by mb0261 » Thu, 2022-06-30 10:48
0
348 by mb0261
Thu, 2022-06-30 10:48
Normal topic Structure Prediction of protein mutant using relax
by Delfosse57 » Tue, 2023-01-10 13:26
1
348 by JW_24
Tue, 2023-01-24 04:55
Normal topic GeneralizedKIC side chain closure.
by almeida85 » Mon, 2022-09-19 06:13
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344 by almeida85
Mon, 2022-09-19 07:22
Normal topic Get fasta from PDB script correction - Solved
by ialvy » Tue, 2022-08-30 00:00
0
338 by ialvy
Tue, 2022-08-30 00:00
Normal topic Error with sequence_tolerance.R processing the checkpoint files, *.ga.entities and *.ga.generations.
by He Xiao » Mon, 2022-11-07 03:41
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335 by He Xiao
Mon, 2022-11-07 04:10
Normal topic N-Terminal Galactose
by SebastianBB » Mon, 2022-11-21 08:33
0
330 by SebastianBB
Mon, 2022-11-21 08:33
Normal topic Problems with ICOOR when generating polymer params file
by liuwenxi » Tue, 2022-08-09 08:33
0
328 by liuwenxi
Tue, 2022-08-09 08:33
Normal topic Error in rosetta_scripts.mpi.linuxgccrelease: double free or corruption (!prev): 0x0000000007697a90
by almeida85 » Thu, 2022-11-17 01:04
0
327 by almeida85
Thu, 2022-11-17 01:04
Normal topic Error when trying to use xml script to design PDB
by Wexter300 » Fri, 2023-02-24 13:29
1
324 by rmoretti
Fri, 2023-02-24 13:58
Normal topic Truncating a protein using rosetta
by Wexter300 » Mon, 2023-02-13 12:05
2
321 by Wexter300
Mon, 2023-02-13 13:04
Normal topic Rosettascript - change residue number and chain ID
by cttm4a1 » Wed, 2022-09-14 23:40
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318 by cttm4a1
Wed, 2022-09-14 23:40
Normal topic Interface scores comparison
by NingNing » Tue, 2022-08-09 17:36
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317 by NingNing
Tue, 2022-08-09 17:36
Normal topic Temperature
by mrosam » Mon, 2022-08-08 01:37
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314 by mrosam
Mon, 2022-08-08 01:37
Normal topic On iterations in ddg_monomer
by Proteinmechanic » Fri, 2022-09-30 21:23
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312 by Proteinmechanic
Fri, 2022-09-30 21:23
Normal topic Method for adding residues into PDB's w/ RosettaScripts.
by Wexter300 » Wed, 2023-03-15 13:07
1
312 by rmoretti
Thu, 2023-03-16 11:46
Normal topic Failure to produce a cst file
by biotech » Wed, 2022-10-26 11:17
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311 by biotech
Wed, 2022-10-26 11:17
Normal topic Grafting using antibody.mpi.linuxgccrelease , the modelled structure does not have constant region of the antibody.
by SubhaK » Thu, 2023-01-26 21:29
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307 by rmoretti
Mon, 2023-02-06 14:35
Normal topic Proper indexing of grafted residues by CCDEndsGraftMover
by cttm4a1 » Wed, 2022-09-07 23:41
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306 by cttm4a1
Wed, 2022-09-07 23:41
Normal topic RosettaDock - protonation states
by LWilliamson » Tue, 2023-08-15 08:15
6
304 by nannemdp
Thu, 2023-08-24 08:21
Normal topic Calculating SAP score using RosettaScripts
by varunmc99 » Fri, 2023-05-12 11:03
2
298 by varunmc99
Fri, 2023-05-12 11:49
Normal topic Which application/mover should I use to evaluate the ddg between apo enzyme and enzyme binding with transition state?
by JasonIsaac » Wed, 2023-02-22 18:36
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276 by JasonIsaac
Wed, 2023-02-22 18:36
Normal topic Converting all residues to poly-Gly/Ala
by jtpi6174 » Tue, 2023-05-09 14:14
2
246 by jtpi6174
Tue, 2023-05-09 15:51
Normal topic Error with residue selectors not counting indices correctly.
by Wexter300 » Tue, 2023-04-04 11:04
1
228 by ajasja
Wed, 2023-04-05 00:20
Normal topic How to set jump between ligands
by Zehui Zhou » Wed, 2023-02-15 04:48
0
226 by Zehui Zhou
Wed, 2023-02-15 07:12
Normal topic Segmentation fault with nstruct > 1
by Brian Wiley » Sun, 2023-02-12 20:46
0
224 by Brian Wiley
Sun, 2023-02-12 20:46
Normal topic rosie github log in
by YUANXU » Tue, 2023-04-25 20:13
1
213 by Sergey
Thu, 2023-04-27 12:03
Normal topic Error in H3_modeling_scores.fasc file from antibody_H3 program
by Brian Wiley » Sat, 2023-02-04 23:41
0
211 by Brian Wiley
Sat, 2023-02-04 23:43
Normal topic Rosetta remodelling - how to change the added residue type instead of just VAL
by xuezhi » Wed, 2023-02-15 14:00
0
211 by xuezhi
Wed, 2023-02-15 14:00
Normal topic different relaxed energy scores for one same protein structure
by ivareve125 » Sun, 2023-07-16 17:54
2
187 by ivareve125
Mon, 2023-07-17 17:37
Normal topic Memory error - double free or corruption
by almeida85 » Thu, 2023-05-25 06:18
0
173 by almeida85
Thu, 2023-05-25 06:18
Normal topic TaskOperations with AntibodyDesignMover
by chenna » Sun, 2023-04-23 23:52
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162 by chenna
Sun, 2023-04-23 23:52
Normal topic Any general way to generate .params file for beta and gamma NCAA?
by wwwmrzkwww » Wed, 2023-04-26 12:35
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155 by wwwmrzkwww
Wed, 2023-04-26 12:35
Normal topic Changing amino acid profile while keeping the backbone conformation between 2 protein structures (need help)
by seamoon » Wed, 2023-05-24 07:46
0
151 by seamoon
Wed, 2023-05-24 07:46
Normal topic How many rifdock can I run at a time on a 64 CPUs and 512GB memory server?
by JasonIsaac » Tue, 2023-05-02 03:39
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148 by JasonIsaac
Tue, 2023-05-02 03:39
Normal topic Scoring correlation with electron density map
by mrosam » Thu, 2023-05-25 05:14
0
147 by mrosam
Thu, 2023-05-25 05:14
Normal topic how to generate _prepro.rama file for a customized beta-amino acid residues?
by wwwmrzkwww » Sun, 2023-04-23 14:25
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147 by wwwmrzkwww
Sun, 2023-04-23 14:25
Normal topic Questions about gen_apo_grids
by JasonIsaac » Sat, 2023-06-17 00:20
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137 by JasonIsaac
Sat, 2023-06-17 00:20
Normal topic Error when using published constraints file
by Delfosse57 » Thu, 2023-08-17 11:22
2
137 by ikalvet
Mon, 2023-08-21 05:52
Normal topic [ WARNING ] missing an atom: 1 H that depends on a nonexistent polymer connection!
by Jane_002 » Tue, 2023-08-08 21:07
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100 by Jane_002
Tue, 2023-08-08 21:07
Normal topic Generating Params File for water molecule
by Ahmed Raslan » Thu, 2023-08-17 13:13
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94 by Ahmed Raslan
Thu, 2023-08-17 13:13
Normal topic GALigandDock errors
by Delfosse57 » Mon, 2023-08-07 13:16
0
82 by Delfosse57
Mon, 2023-08-07 13:16
Normal topic Predicting conformations of mutated residues
by Delfosse57 » Tue, 2023-08-22 12:26
1
81 by rmoretti
Wed, 2023-08-23 08:26
Normal topic Replacing a single residue in a structure
by Wexter300 » Sat, 2023-09-16 14:23
0
41 by Wexter300
Sat, 2023-09-16 14:23

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