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Rosetta 3 - General

Topic / Topic startersort ascending Replies Views Last post
Normal topic Segmentation fault
by Hongtham » Mon, 2014-12-15 20:21
3
4,986 by Sandy
Fri, 2015-08-07 15:49
Normal topic Segfault with docking protocol
by almeida85 » Mon, 2021-02-08 06:39
2
1,392 by almeida85
Mon, 2021-02-08 09:50
Normal topic segfault in membrane_abinitio2.mpi
by siegert » Sat, 2014-06-14 15:56
1
2,172 by yarovoy
Wed, 2016-03-30 12:37
Normal topic SecundaryStructure Filter
by Soler » Sat, 2021-11-20 23:41
0
701 by Soler
Sat, 2021-11-20 23:41
Normal topic Secondary Structure Relax
by ac.research » Sat, 2018-03-17 10:50
5
4,579 by smlewis
Wed, 2018-03-21 08:42
Normal topic secondary structure prediction for generation of fragment libraries
by xpzhang » Sat, 2011-06-25 00:47
1
3,515 by smlewis
Mon, 2014-04-21 06:47
Normal topic Seasons greetings with a Christmas tree shaped protein
by matteoferla » Sun, 2019-12-22 03:37
4
2,902 by matteoferla
Mon, 2019-12-23 07:24
Normal topic Searching density map using real space correlation
by ahmadkhalifa » Fri, 2018-12-28 00:28
0
906 by ahmadkhalifa
Fri, 2018-12-28 00:28
Normal topic scoring with omega energy term
by SergeyP » Thu, 2017-03-09 12:03
2
2,643 by SergeyP
Fri, 2017-03-10 11:16
Normal topic Scoring when the protein is a different length
by gw » Wed, 2012-08-01 08:53
1
2,862 by smlewis
Mon, 2014-04-21 06:47
Normal topic scoring models
by peony » Fri, 2013-12-06 02:45
5
5,785 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Scoring in Rosetta
by Elijah_Hix » Wed, 2021-07-14 06:48
1
1,121 by rmoretti
Wed, 2021-07-14 07:07
Normal topic scoring function changed from 2.3?
by jarod » Mon, 2010-04-12 18:56
1
1,958 by smlewis
Mon, 2014-04-21 06:47
Normal topic Scoring Electrostatics
by aroop » Tue, 2012-08-07 11:41
5
5,461 by aroop
Mon, 2014-04-21 06:47
Normal topic Scoring correlation with electron density map
by mrosam » Thu, 2023-05-25 05:14
0
298 by mrosam
Thu, 2023-05-25 05:14
Normal topic Scoring Centroid Structures
by Trentage » Sun, 2010-03-28 19:21
0
1,892 by Trentage
Mon, 2014-04-21 06:47
Normal topic score_jd2.macosclangrelease No such file or directory
by ahmadkhalifa » Mon, 2017-11-27 09:26
3
3,811 by everyday847
Tue, 2017-11-28 13:07
Normal topic scorefunction Talaris2013
by dave » Tue, 2015-03-03 02:13
1
2,381 by rmoretti
Thu, 2015-04-02 12:52
Normal topic score.sc only shows total_score and with all zeros
by johnnytam100 » Mon, 2022-06-06 20:04
2
893 by johnnytam100
Tue, 2022-06-07 19:18
Normal topic score terms
by qlj » Wed, 2013-07-03 08:00
3
4,262 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Score function: unable to open input_files/1qys.pdb
by Cyrrusm » Tue, 2020-10-13 11:35
1
1,364 by rmoretti
Tue, 2020-10-13 11:40
Normal topic Score function in protein-protein docking with constrains
by Zehui Zhou » Mon, 2023-02-06 03:31
2
824 by Zehui Zhou
Wed, 2023-02-15 05:40
Normal topic score function for centroid mode
by MarkW » Thu, 2015-02-26 08:56
1
2,392 by jadolfbr
Fri, 2015-02-27 11:08
Normal topic Score Differences between Ab Initio Scoring and Rescore
by mmarlett » Wed, 2016-06-15 09:14
2
2,608 by mmarlett
Thu, 2016-06-16 07:06
Normal topic score against rmsd plot of designs
by LanMei » Mon, 2022-03-21 22:46
2
1,068 by LanMei
Tue, 2022-03-22 20:45
Hot topic SCons compilation error (Windows XP, 32bit)
by CRickert » Mon, 2009-08-03 00:57
28
24,407 by Marsia
Mon, 2014-04-21 06:47
Normal topic Save silent results to individual directory by process ID
by Payne » Sat, 2022-09-24 05:23
3
983 by rmoretti
Thu, 2022-09-29 00:15
Normal topic SASA packing score in Rosetta 3.1
by enoee » Wed, 2010-07-28 01:45
6
6,672 by smlewis
Mon, 2014-04-21 06:47
Normal topic SARS-CoV-2: call for compound predictions against protease
by matteoferla » Sun, 2020-03-22 05:29
0
983 by matteoferla
Sun, 2020-03-22 05:29
Normal topic sam.predict-2nd for make_fragments.pl script
by sumukh21 » Tue, 2011-02-22 17:40
0
1,562 by sumukh21
Mon, 2014-04-21 06:47
Normal topic RuntimeError: CUDA out of memory.
by ravi.thakkar » Tue, 2023-03-07 00:27
2
677 by rmoretti
Tue, 2023-03-07 08:18
Normal topic runtime error
by exchhattu » Wed, 2010-03-03 02:54
2
2,516 by exchhattu
Mon, 2014-04-21 06:47
Normal topic Running time of Rosetta/FlexPepDock
by gerdos » Thu, 2015-10-15 02:14
2
2,676 by gerdos
Fri, 2015-10-16 03:01
Normal topic Running the Matcher on multiple PDBs
by Jhreed » Thu, 2016-02-18 08:50
1
2,067 by rmoretti
Sun, 2016-02-21 06:38
Normal topic Running RosettaScripts, but got an error "src/utility/options/OptionCollection.cc, line 1153, No values of the appropriate type"
by zhoubin » Sun, 2021-02-28 08:51
3
2,002 by zhoubin
Mon, 2021-03-01 22:11
Normal topic running Rosetta with MPI
by rohi » Sat, 2020-09-05 16:06
1
1,500 by rmoretti
Tue, 2021-02-09 13:44
Normal topic running Rosetta locally using commands generated by the Robetta web server
by cneale » Sat, 2014-03-15 11:48
3
4,179 by cneale
Fri, 2014-03-21 18:13
Normal topic running ROBETTA protocol for proteins >1000 aa long
by tevang » Thu, 2010-07-15 07:09
0
1,545 by tevang
Mon, 2014-04-21 06:47
Normal topic Running CstFileToTheozyme for Mono-Atomic Metal
by Jhreed » Fri, 2016-07-08 13:43
0
1,263 by Jhreed
Fri, 2016-07-08 13:44
Normal topic Running Backrub
by enoee » Wed, 2010-10-27 07:51
1
2,211 by smlewis
Mon, 2014-04-21 06:47
Normal topic Running a ReportFSC mover between two .mrc maps
by ahmadkhalifa » Mon, 2018-03-12 07:52
9
5,994 by brandon.frenz
Tue, 2018-03-20 10:28
Normal topic run:test_cycles
by ramin » Sun, 2013-03-10 11:05
1
2,087 by smlewis
Mon, 2014-04-21 06:47
Normal topic run Rosetta under windows prompt
by skipper » Fri, 2013-12-20 21:16
3
4,301 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Run protein-protein docking parallelly by mpi
by Zehui Zhou » Thu, 2023-02-02 06:23
3
868 by Zehui Zhou
Fri, 2023-02-03 05:51
Normal topic Run PackRotamersMover on specified rotamer set
by pachecoj » Mon, 2014-11-10 06:51
2
2,809 by pachecoj
Tue, 2014-11-11 19:30
Normal topic rs filter for terms in .sc files
by gw » Sat, 2012-08-18 16:20
4
4,648 by gw
Mon, 2014-04-21 06:47
Normal topic Rotate MOVER
by gw » Wed, 2012-08-15 12:09
5
5,245 by glemmon
Mon, 2014-04-21 06:47
Normal topic Rotate chain
by Germanico » Sun, 2021-05-09 16:36
3
1,971 by danpf
Mon, 2021-05-10 10:04
Normal topic Rotamer Library Generation in Rosetta3
by jcminerlanl » Wed, 2016-11-30 07:34
5
5,804 by rmoretti
Tue, 2021-02-09 11:52
Normal topic rosie github log in
by YUANXU » Tue, 2023-04-25 20:13
1
426 by Sergey
Thu, 2023-04-27 12:03
Normal topic rosetta_scripts_BOGUS coords warning message
by Karol » Tue, 2016-12-13 02:35
5
5,420 by Karol
Thu, 2016-12-15 01:35
Normal topic RosettaVIP
by nick.polizzi » Tue, 2013-08-06 15:13
8
7,532 by rmoretti
Mon, 2014-04-21 06:48
Normal topic rosettautil module not imported cleanly by python scripts
by franfdez » Tue, 2013-08-27 01:25
1
3,040 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Rosettascript - change residue number and chain ID
by cttm4a1 » Wed, 2022-09-14 23:40
0
462 by cttm4a1
Wed, 2022-09-14 23:40
Normal topic rosettaScore.py has a typo, I think. Can I fix it in my own copy?
by mdeklotz » Thu, 2018-08-02 15:15
4
3,391 by rmoretti
Fri, 2018-08-03 11:39
Normal topic RosettaRemodel gives no increased output when setting higher -num_trajectory
by JW_24 » Tue, 2020-09-22 11:49
2
1,587 by JW_24
Wed, 2020-09-23 01:27
Normal topic rosettaremodel
by berk » Fri, 2013-06-07 00:42
3
3,296 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic RosettaRemodel
by berk » Wed, 2013-07-10 11:21
2
2,767 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic RosettaProtein_Docking
by khadkab@mcmaster.ca » Tue, 2015-06-30 11:28
1
3,138 by rmoretti
Fri, 2015-07-03 13:24
Normal topic RosettaMatch Problem
by David » Tue, 2019-01-22 12:23
0
1,941 by David
Tue, 2019-01-22 12:23
Normal topic RosettaMatch in Rosetta3.2?
by SenyorDrew » Fri, 2010-08-13 07:47
1
2,745 by smlewis
Mon, 2014-04-21 06:47
Normal topic RosettaMatch in 3.2
by jtmacd » Mon, 2010-12-20 08:04
4
4,927 by jtmacd
Mon, 2014-04-21 06:47
Normal topic RosettaMatch
by jtmacd » Wed, 2012-01-11 06:50
5
9,952 by jtmacd
Mon, 2014-04-21 06:47
Normal topic RosettaHoles?
by kbala » Thu, 2009-07-30 16:52
3
3,735 by smlewis
Mon, 2014-04-21 06:47
Normal topic RosettaHoles in 3.1
by enoee » Thu, 2010-10-14 07:12
1
2,390 by smlewis
Mon, 2014-04-21 06:47
Normal topic RosettaHoles
by ge0rgekh0ury » Mon, 2012-01-09 09:01
6
6,066 by Anonymous
Mon, 2014-04-21 06:47
Normal topic RosettaDOM
by ndousis » Sun, 2010-12-12 01:08
2
3,184 by ndousis
Mon, 2014-04-21 06:47
Normal topic RosettaDock-4.0 score term
by Zjq1998 » Wed, 2022-06-29 22:07
3
1,456 by ssrb
Tue, 2022-07-05 11:07
Normal topic RosettaDock-3.2 output
by Zjq1998 » Wed, 2022-06-15 23:54
0
461 by Zjq1998
Wed, 2022-06-15 23:54
Normal topic RosettaDock decoys recoring with ZRANK
by cheyuk » Fri, 2014-04-11 01:40
5
7,832 by rmoretti
Thu, 2016-04-28 15:53
Normal topic RosettaDock - protonation states
by LWilliamson » Tue, 2023-08-15 08:15
6
1,025 by nannemdp
Thu, 2023-08-24 08:21
Normal topic RosettaDesign Server, reproducing optimized interface conformation
by AlexanderMetz » Thu, 2012-02-09 10:41
1
3,349 by smlewis
Mon, 2014-04-21 06:47
Normal topic RosettaDesign improvements
by ac.research » Mon, 2018-05-14 08:27
0
1,104 by ac.research
Mon, 2018-05-14 08:27
Normal topic RosettaDesign
by ac.research » Sun, 2019-07-21 01:20
2
3,285 by ac.research
Sat, 2019-08-03 08:12
Normal topic RosettaCM: threading okay, but hybridize loses many secondary structure
by lanselibai » Wed, 2021-06-23 13:51
2
1,219 by lanselibai
Thu, 2021-06-24 10:16
Normal topic RosettaCM: help to generate similar models as those from Robetta Server
by haom » Wed, 2020-09-09 09:19
0
972 by haom
Wed, 2020-09-09 09:19
Normal topic RosettaCM: adding constraints while keeping AUTO constraints
by Michele.Bonus » Sun, 2020-08-30 10:42
2
1,758 by Michele.Bonus
Sun, 2020-08-30 23:06
Normal topic RosettaCM: "Ligands must be added to all templates"
by lanselibai » Tue, 2021-06-22 10:42
2
1,226 by lanselibai
Wed, 2021-06-23 13:21
Normal topic RosettaCM rename or swap the order of sequences in your alignment file
by ahmadkhalifa » Fri, 2017-12-22 08:42
4
3,713 by rmoretti
Mon, 2018-01-15 15:24
Normal topic RosettaCM density guided rebuilding methodology
by ahmadkhalifa » Thu, 2018-08-30 06:45
4
3,190 by ahmadkhalifa
Thu, 2018-08-30 23:09
Normal topic rosetta@home in local PC farm
by jarod » Wed, 2010-05-05 18:31
1
2,155 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta@cloud -- Macromolecular modeling in the cloud, Beta 1 is released!
by xujc » Wed, 2012-10-24 11:15
0
4,186 by xujc
Mon, 2014-04-21 06:47
Normal topic Rosetta: Clustering
by sskim » Sat, 2016-06-11 14:44
1
2,053 by rmoretti
Tue, 2016-07-12 08:36
Normal topic Rosetta3.5 src/core/pack/dunbrack/RotamerLibrary.cc permission problem
by ytao » Fri, 2013-06-28 12:13
2
3,417 by ytao
Mon, 2014-04-21 06:48
Normal topic Rosetta3.3 enzyme_design errors
by jtmacd » Wed, 2012-01-25 03:33
7
7,876 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Rosetta3.2 cluster application file-reading error
by mdyini » Wed, 2011-03-09 16:59
3
5,534 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta3 Tutorials Beta Release
by smlewis » Fri, 2011-08-19 13:35
7
7,572 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta3 Tutorials
by smlewis » Fri, 2011-11-18 07:33
8
17,157 by rmoretti
Tue, 2019-07-09 10:24
Normal topic Rosetta/PyRosetta on GPU
by ac.research » Mon, 2017-11-06 05:18
1
4,802 by rmoretti
Mon, 2017-11-06 07:36
Normal topic Rosetta-foldtree and docking
by tingting » Tue, 2022-03-15 22:49
5
1,956 by aastha.pal
Mon, 2022-06-27 09:55
Normal topic Rosetta-based projects using and licensing
by SergeyP » Fri, 2018-10-26 15:45
3
3,109 by SergeyP
Mon, 2018-11-12 09:19
Normal topic Rosetta structure refinement alters bound ligand
by ahmadkhalifa » Mon, 2018-07-23 07:49
1
1,932 by rmoretti
Fri, 2018-08-03 08:59
Normal topic rosetta scripts to superimpose multiple segments
by rlwoltz » Fri, 2022-04-29 15:15
0
533 by rlwoltz
Fri, 2022-04-29 15:15
Normal topic Rosetta script to relax a neighborhood only
by matteoferla » Mon, 2018-10-29 03:34
1
1,618 by jadolfbr
Fri, 2018-11-09 09:17
Normal topic rosetta run error
by isengupta13 » Thu, 2010-06-03 19:00
2
3,095 by aminzia
Fri, 2019-07-26 13:14
Normal topic Rosetta Resfile header
by G Mustafa » Mon, 2020-01-20 06:45
2
2,152 by G Mustafa
Tue, 2020-01-21 06:04
Normal topic Rosetta repacking output
by doranhen » Mon, 2012-12-03 03:44
5
5,862 by doranhen
Mon, 2014-04-21 06:47
Normal topic Rosetta remodel on intel Xeon Phi
by pablogalazdavison » Wed, 2016-09-14 15:35
3
3,339 by pablogalazdavison
Thu, 2016-09-15 16:36
Normal topic Rosetta releases and revision numbers
by ShaneOConnor » Thu, 2011-11-17 13:55
2
4,581 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta relax application for generating ensemble of structures.
by abhi_pe_acharya » Mon, 2018-02-26 09:08
3
3,503 by ssrb
Tue, 2018-03-06 14:15
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