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Rosetta 3 - General
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rosetta@home in local PC farm by jarod » Wed, 2010-05-05 18:31 |
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2,041 |
by smlewis Mon, 2014-04-21 06:47 |
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Intel Compiler and OS X Intel by bene » Tue, 2009-10-20 10:20 |
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2,366 |
by smlewis Mon, 2014-04-21 06:47 |
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RosettaHoles in 3.1 by enoee » Thu, 2010-10-14 07:12 |
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2,277 |
by smlewis Mon, 2014-04-21 06:47 |
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Building Rosetta PROBLEM by nunesjulioc » Fri, 2010-02-26 06:03 |
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1,852 |
by smlewis Mon, 2014-04-21 06:47 |
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secondary structure prediction for generation of fragment libraries by xpzhang » Sat, 2011-06-25 00:47 |
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3,396 |
by smlewis Mon, 2014-04-21 06:47 |
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missing amino acid by berk » Fri, 2013-06-14 06:07 |
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1,816 |
by smlewis Mon, 2014-04-21 06:48 |
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Computing pairwise energies for rotamers by pachecoj » Sat, 2014-05-03 17:52 |
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2,052 |
by rmoretti Mon, 2014-05-12 07:50 |
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Output fasta of enzdes generated pdbs by eyong123 » Tue, 2015-05-19 08:07 |
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2,069 |
by rmoretti Mon, 2015-05-25 11:07 |
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multiple symmetry definition files by sdh_h » Wed, 2016-06-29 09:31 |
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1,709 |
by rmoretti Wed, 2016-06-29 10:20 |
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Fixing certain residues during refinement by ckdenist » Thu, 2019-08-29 14:00 |
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1,522 |
by jadolfbr Thu, 2019-08-29 14:29 |
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Version of VALL Database and Corresponding Constraint Coordinate File for Fragment Generation by jurkm » Mon, 2011-05-02 03:00 |
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3,098 |
by smlewis Mon, 2014-04-21 06:47 |
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Combine flags file with command line arguments? by cossio » Mon, 2014-12-22 13:52 |
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3,014 |
by smlewis Tue, 2014-12-23 13:58 |
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can not find a residue type that matches the residue HIS_P:NtermProteinFull by tarsis » Wed, 2017-04-05 08:51 |
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2,462 |
by rmoretti Fri, 2017-04-14 08:37 |
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Segmentation fault (core dumped) denovo_density.linuxgccrelease by ahmadkhalifa » Sun, 2018-04-15 17:52 |
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1,847 |
by smlewis Mon, 2018-04-16 16:32 |
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How to determine the value size in block of *.cst files? by weifulei » Sun, 2019-05-05 19:56 |
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1,459 |
by rmoretti Tue, 2019-07-09 15:48 |
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Using specific rotamers by sahn97 » Fri, 2022-08-26 13:45 |
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475 |
by rmoretti Fri, 2022-08-26 14:51 |
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RosettaMatch in Rosetta3.2? by SenyorDrew » Fri, 2010-08-13 07:47 |
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2,638 |
by smlewis Mon, 2014-04-21 06:47 |
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dock_mcm not found by libai2098 » Mon, 2011-03-14 00:02 |
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2,108 |
by smlewis Mon, 2014-04-21 06:47 |
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Recommendations for CoupledMoves enzyme redesign by dgm3 » Thu, 2021-03-04 10:53 |
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1,133 |
by aloshbau Tue, 2021-03-09 02:47 |
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make_fragments.pl without sparks by nannemdp » Mon, 2014-06-09 13:18 |
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2,094 |
by rmoretti Tue, 2014-06-10 11:34 |
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Could the Relax step be used separately ? （solved） by wszjzhang » Tue, 2010-03-30 15:00 |
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1,987 |
by smlewis Mon, 2014-04-21 06:47 |
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ERROR - PDB's with occupancy field equal '1.0' by khanhbinh » Sun, 2012-09-23 09:38 |
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2,172 |
by rmoretti Mon, 2014-04-21 06:47 |
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Determining Rosetta version from directory by linucks » Fri, 2014-02-28 04:04 |
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2,761 |
by smlewis Fri, 2014-02-28 05:45 |
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optimisation of a protein-protein interface by sdh_h » Thu, 2017-05-04 05:06 |
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1,996 |
by rmoretti Mon, 2017-05-15 09:03 |
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clean_pdb_keep_ligand.py IndexError by to-qinbin@163.com » Sat, 2022-09-10 04:04 |
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467 |
by rmoretti Mon, 2022-09-12 06:58 |
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Problem in 3D structure building of ss DNA aptamer by irshadbaig » Sun, 2013-11-17 20:15 |
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3,835 |
by rmoretti Mon, 2014-04-21 06:48 |
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I made a RDKit Chem.Mol to params converter — feedback welcome! by matteoferla » Sun, 2020-05-03 10:14 |
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1,542 |
by jadolfbr Sun, 2020-05-03 19:38 |
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Generate template parameter file for a polymer by anarob » Fri, 2022-06-10 11:05 |
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546 |
by matteoferla Fri, 2022-06-17 10:38 |
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Non-ideal residue detected by cnelson » Thu, 2010-07-01 12:20 |
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2,093 |
by smlewis Mon, 2014-04-21 06:47 |
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combine silent.out file by venkatazb » Fri, 2016-07-22 05:22 |
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3,302 |
by smlewis Fri, 2016-07-22 07:31 |
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Rosetta structure refinement alters bound ligand by ahmadkhalifa » Mon, 2018-07-23 07:49 |
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1,723 |
by rmoretti Fri, 2018-08-03 08:59 |
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Structural Similarity by Soler » Mon, 2021-11-29 22:02 |
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853 |
by rmoretti Tue, 2021-11-30 07:41 |
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dealing with Large ligand in Ligand docking and enzyme design by rohi » Mon, 2021-01-04 09:58 |
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1,038 |
by rmoretti Tue, 2021-02-09 10:48 |
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Docking mover by Soler » Sat, 2022-02-12 20:48 |
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767 |
by jadolfbr Sat, 2022-02-12 23:16 |
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general question about protein docking by albumns » Mon, 2010-12-13 23:26 |
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2,327 |
by JeffreyGray Mon, 2014-04-21 06:47 |
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Model Extraction by mdweirna » Tue, 2010-04-13 15:28 |
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1,861 |
by smlewis Mon, 2014-04-21 06:47 |
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About Rosetta Scoring Function by wszjzhang » Wed, 2010-02-03 09:22 |
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2,284 |
by smlewis Mon, 2014-04-21 06:47 |
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protein-protien docking with uniform trans by lkingsle » Thu, 2012-02-09 07:19 |
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2,518 |
by mpacella Mon, 2014-04-21 06:47 |
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scorefunction Talaris2013 by dave » Tue, 2015-03-03 02:13 |
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2,256 |
by rmoretti Thu, 2015-04-02 12:52 |
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TEST - who got this email? by smlewis » Mon, 2016-05-23 17:24 |
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1,642 |
by rmoretti Tue, 2016-07-12 08:48 |
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MakeRotLib by yinasun » Fri, 2019-07-26 02:20 |
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1,402 |
by rmoretti Mon, 2019-08-26 15:01 |
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How to specify a specific rotamer by Lior_UCSF » Wed, 2018-02-21 20:35 |
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1,375 |
by rmoretti Thu, 2018-02-22 09:29 |
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Error in molfile_to_params_polymer.py for NCAA by kkuo33 » Mon, 2020-05-18 16:41 |
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1,487 |
by matteoferla Sat, 2020-05-23 03:09 |
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Clustering problem by Suuo » Tue, 2021-04-20 01:40 |
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1,008 |
by rmoretti Tue, 2021-04-20 13:06 |
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idealization error by albumns » Mon, 2011-02-07 01:28 |
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2,002 |
by smlewis Mon, 2014-04-21 06:47 |
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Ensemble Docking with RosettaDock 4.0 Protocol by mb0261 » Wed, 2022-07-27 07:00 |
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734 |
by mb0261 Mon, 2022-09-26 07:50 |
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Residue not found in pose by lzx32 » Fri, 2011-09-09 03:42 |
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2,629 |
by rmoretti Mon, 2014-04-21 06:47 |
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Symmetric Docking (Making Trimer from Monomerics Units) by sdg_lab » Thu, 2012-04-12 09:21 |
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2,098 |
by rmoretti Mon, 2014-04-21 06:47 |
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AtomTree::torsion_angle() can't find dof! in match and enzdes by petrikigor » Fri, 2012-10-19 09:49 |
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2,451 |
by rmoretti Mon, 2014-04-21 06:47 |
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Clustering and Protein Preparation for docking by MRH » Sun, 2013-08-25 22:01 |
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3,219 |
by rmoretti Mon, 2014-04-21 06:48 |
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dock & design by sdh_h » Fri, 2016-09-02 03:07 |
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2,102 |
by rmoretti Mon, 2016-09-05 09:39 |
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ERROR: Unable to open weights. by libai2098 » Thu, 2010-12-30 17:54 |
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2,020 |
by smlewis Mon, 2014-04-21 06:47 |
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positive results in total_score by symmetry docking by Jacob » Thu, 2011-06-16 05:18 |
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3,296 |
by rmoretti Mon, 2014-04-21 06:47 |
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Pair potential by jadolfbr » Thu, 2011-12-08 08:06 |
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2,546 |
by smlewis Mon, 2014-04-21 06:47 |
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Dumb question: Rosetta 3 vs Rosetta++, what's the difference? by mintseris » Tue, 2013-12-31 13:03 |
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2,413 |
by rmoretti Mon, 2014-04-21 06:48 |
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Running the Matcher on multiple PDBs by Jhreed » Thu, 2016-02-18 08:50 |
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1,924 |
by rmoretti Sun, 2016-02-21 06:38 |
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[dev] not seeing energy in pose row for new energy term in design by ipetrik_ambry » Fri, 2017-03-03 13:16 |
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1,827 |
by ipetrik_ambry Tue, 2017-03-14 14:09 |
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Denovo prediction from multiple fragment lengths by ahmadkhalifa » Sun, 2019-03-24 03:55 |
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1,285 |
by rmoretti Sat, 2019-03-30 12:10 |
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Ligand docking: how to generate the crystal_complex.pdb with hydrogens added by nhinguyen26 » Wed, 2020-06-17 15:03 |
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1,198 |
by matteoferla Sat, 2020-06-20 03:56 |
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FastRelax Mover with symmetry, ligand and membrane by Michele.Bonus » Wed, 2021-05-26 04:43 |
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1,227 |
by matteoferla Thu, 2021-06-03 08:24 |
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Generate full symmetric assembly from subsystem by lj269 » Thu, 2011-04-28 20:04 |
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2,267 |
by IAndre Mon, 2014-04-21 06:47 |
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ratio of conformers and docking output by pramod » Fri, 2014-12-12 12:54 |
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2,154 |
by rmoretti Mon, 2014-12-15 02:37 |
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setup_run error with multiple resonance lists by aep » Fri, 2016-03-18 13:36 |
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1,944 |
by rmoretti Thu, 2016-04-28 15:49 |
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problems with implementing NOE constraints by connyyu » Thu, 2019-04-11 12:37 |
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1,313 |
by connyyu Thu, 2019-04-18 03:26 |
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simple_cycpep_predict issue modifying terminal residue by JEaston » Thu, 2020-06-25 13:15 |
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1,193 |
by vmulligan Mon, 2020-06-29 13:09 |
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Internal error while running AbinitioRelax by Subhrodeep Saha » Sun, 2021-06-13 03:44 |
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1,035 |
by rmoretti Wed, 2021-06-23 02:17 |
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snugdock and rosetta 3.2?? by sudhar » Thu, 2011-02-24 00:36 |
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2,109 |
by smlewis Mon, 2014-04-21 06:47 |
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extract 10001+ pdbs by viochemist » Thu, 2010-07-29 16:25 |
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1,808 |
by smlewis Mon, 2014-04-21 06:47 |
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mcm for Docking in Rosetta3.1 by dyq » Tue, 2010-01-12 13:44 |
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2,149 |
by smlewis Mon, 2014-04-21 06:47 |
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Available of some protocals mentioned in publications by SunH » Mon, 2013-09-09 20:47 |
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1,975 |
by rmoretti Mon, 2014-04-21 06:48 |
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Error when using next-gen KIC (Signal 6) by janwp » Tue, 2014-08-26 08:36 |
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2,720 |
by amelie Tue, 2014-09-30 14:29 |
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Can I use next generation KIC with fragments? by Loki01 » Thu, 2017-12-07 06:19 |
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1,440 |
by Loki01 Wed, 2017-12-13 05:27 |
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Params file for Methane by dasdevashishdas » Sun, 2018-10-07 21:34 |
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1,363 |
by rmoretti Mon, 2018-10-08 11:20 |
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Are 100 structures the maximum generated when using homology_with_end_extension (broker protocol)? by thaisarns » Fri, 2020-02-21 05:46 |
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1,155 |
by sheehajh Fri, 2020-02-21 12:41 |
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Residue outside res_map range by amcallister » Fri, 2022-04-22 11:26 |
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615 |
by aneeqh Fri, 2022-09-02 13:36 |
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build rosetta by cross-platform compiler by jarod » Fri, 2010-05-07 21:49 |
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1,876 |
by smlewis Mon, 2014-04-21 06:47 |
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Running Backrub by enoee » Wed, 2010-10-27 07:51 |
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2,082 |
by smlewis Mon, 2014-04-21 06:47 |
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Interpreting decoy ensemble by lah435 » Wed, 2015-06-10 10:25 |
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1,835 |
by rmoretti Fri, 2015-07-03 13:51 |
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Protein-Protein Docking by hwillis » Fri, 2009-08-07 01:31 |
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2,449 |
by smlewis Mon, 2014-04-21 06:47 |
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Need help with compilation (How to test if compilation is sucessful) by greenfur » Fri, 2012-06-29 12:29 |
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2,886 |
by smlewis Mon, 2014-04-21 06:47 |
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pdb 2 silent with ss information by kalabharath » Sun, 2013-04-14 20:59 |
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2,322 |
by smlewis Mon, 2014-04-21 06:47 |
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non-canonical residues parametrisation by DmitriiN » Tue, 2016-04-05 02:37 |
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1,889 |
by rmoretti Fri, 2016-04-08 08:43 |
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Library of unnatural amino acid parameters by saxen » Mon, 2017-04-17 11:08 |
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3,503 |
by smlewis Tue, 2017-04-18 08:33 |
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How to provide multiple templates for Robetta with RosettaCM option? by lanselibai » Wed, 2021-06-23 14:06 |
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829 |
by lanselibai Wed, 2021-06-23 14:53 |
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PDB weird to PDB rosetta friendly by jpfuenzalidawx » Fri, 2022-09-02 04:43 |
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470 |
by rmoretti Tue, 2022-09-06 08:13 |
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null rosetta energy/score by fred » Tue, 2011-10-18 10:31 |
1 |
2,028 |
by fred Mon, 2014-04-21 06:47 |
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which modules support MPI now? by albumns » Fri, 2013-11-08 01:32 |
1 |
2,030 |
by rmoretti Mon, 2014-04-21 06:48 |
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Consistent XYZvector length() zero failure in EnzDes by mwfranklin » Thu, 2018-11-01 12:44 |
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1,485 |
by rmoretti Wed, 2018-11-21 14:14 |
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ShapeSimilarity, ElectrostaticSimilarity (RosettaSurf) by Ken » Mon, 2022-05-23 07:16 |
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590 |
by ajasja Mon, 2022-05-23 07:19 |
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Snugdock and antibody modelling by sudhar » Thu, 2010-06-10 08:13 |
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2,375 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta groups in Scandinavia by knutjbj » Mon, 2010-11-15 23:50 |
1 |
2,147 |
by smlewis Mon, 2014-04-21 06:47 |
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Building Rosetta Problem: Processor architecture unsupported? by jalfaro » Tue, 2010-03-23 05:48 |
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2,799 |
by reddybg Mon, 2014-04-21 06:47 |
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Pairwise decomposable terms in the Rosetta energy function by pgainza » Wed, 2011-08-03 12:26 |
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3,349 |
by rmoretti Mon, 2014-04-21 06:47 |
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How to judge docking success for two proteins without knowledge of native structure by jasnyderjr » Fri, 2015-07-10 14:27 |
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2,513 |
by rmoretti Tue, 2015-07-14 15:27 |
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Read svn acces or acces to developmen version of rosetta by knutjbj » Thu, 2010-12-09 17:06 |
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2,277 |
by smlewis Mon, 2014-04-21 06:47 |
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Installing rosetta 3.0 by dalemu » Thu, 2009-09-24 13:28 |
1 |
2,595 |
by smlewis Mon, 2014-04-21 06:47 |
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Parallel computing? by mansi » Thu, 2010-08-19 08:39 |
1 |
2,148 |
by smlewis Mon, 2014-04-21 06:47 |
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How NMR structures can be inputted to Rosetta? by exchhattu » Mon, 2015-02-09 17:44 |
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1,942 |
by rmoretti Wed, 2015-02-18 09:19 |
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Some problems with the "advanced protein-protein docking" tutorial by Sunyp_IM » Tue, 2017-06-27 09:33 |
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1,713 |
by smlewis Wed, 2017-06-28 06:59 |
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IS there any source code about protein structure prediction with only sequences information? by ylwang » Mon, 2019-07-08 02:36 |
1 |
1,399 |
by rmoretti Mon, 2019-07-08 08:05 |
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