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Normal topic Modelling a loopless structure
by jhbrown » Tue, 2011-11-22 11:39 		2
 3,000 by jhbrown
Mon, 2014-04-21 06:47
Normal topic ERROR: filtered_alignments.size() > 0
by jhbrown » Tue, 2012-01-17 13:28 		2
 2,536 by jhbrown
Mon, 2014-04-21 06:47
Normal topic Changing Monte Carlo temperature for relax
by jruhym » Thu, 2012-02-02 15:18 		1
 2,551 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Fragment file viewers
by MajorID » Fri, 2012-02-24 20:57 		2
 2,787 by smlewis
Mon, 2014-04-21 06:47
Normal topic using defined WATERS in PACKING
by ast » Wed, 2012-01-11 09:11 		4
 4,378 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta3.3 enzyme_design errors
by jtmacd » Wed, 2012-01-25 03:33 		7
 8,037 by rmoretti
Mon, 2014-04-21 06:47
Normal topic RosettaDesign Server, reproducing optimized interface conformation
by AlexanderMetz » Thu, 2012-02-09 10:41 		1
 3,401 by smlewis
Mon, 2014-04-21 06:47
Normal topic Comparing scores
by renedominik » Mon, 2012-02-27 05:21 		4
 4,643 by renedominik
Mon, 2014-04-21 06:47
Normal topic restricting space in a design
by ast » Tue, 2012-01-17 06:31 		2
 2,747 by rmoretti
Mon, 2014-04-21 06:47
Normal topic error during docking
by zhisheng » Thu, 2012-02-02 12:10 		10
 9,369 by smlewis
Mon, 2014-04-21 06:47
Normal topic How to install Rosetta in Redhat Linux ?
by ajaniharesh » Fri, 2012-02-24 02:32 		1
 5,525 by smlewis
Mon, 2014-04-21 06:47
Normal topic Relax Refinement for complecated targets
by jiongzhang » Fri, 2012-01-20 09:57 		10
 8,182 by jiongzhang
Mon, 2014-04-21 06:47
Normal topic protein-protien docking with uniform trans
by lkingsle » Thu, 2012-02-09 07:19 		1
 2,679 by mpacella
Mon, 2014-04-21 06:47
Normal topic core.scoring.rms_util: WARNING: CA_rmsd out of range...
by mdyini » Sat, 2012-02-25 16:14 		4
 4,377 by mdyini
Mon, 2014-04-21 06:47
Normal topic Relax protocol details for Rosetta 3.1
by Matthys » Sun, 2012-01-15 10:00 		4
 4,519 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Docking double-stranded DNA to a protein
by xpzhang » Tue, 2012-01-31 12:35 		5
 8,871 by xpzhang
Mon, 2014-04-21 06:47
Normal topic Criteria on the calculation of Irmsd of the protein-protein interface
by yzq » Tue, 2012-02-21 07:06 		3
 4,281 by smlewis
Mon, 2014-04-21 06:47
Normal topic dun10
by jadolfbr » Thu, 2012-01-19 12:16 		5
 5,136 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic NC atom type [Solved]
by franfdez » Tue, 2012-02-07 16:05 		3
 3,981 by franfdez
Mon, 2014-04-21 06:47
Normal topic membrane protein packing prediction
by djpittdj » Fri, 2012-01-13 08:55 		4
 4,223 by pardave
Mon, 2014-04-21 06:47
Normal topic Creating new residue type for pyridoxal phosphate bound to lysine (LLP) [Solved]
by franfdez » Sat, 2012-01-28 11:39 		1
 3,335 by franfdez
Mon, 2014-04-21 06:47
Hot topic RE: Loop Modeling and Beta-strand design
by bharat_46010 » Sun, 2012-02-12 16:34 		19
 16,524 by smlewis
Mon, 2014-04-21 06:47
Normal topic How to run docking in rosetta with small molecule
by ajaniharesh » Tue, 2012-02-28 03:58 		1
 3,952 by smlewis
Mon, 2014-04-21 06:47
Normal topic About RosettaScript examples
by jiongzhang » Thu, 2012-03-08 10:50 		1
 2,429 by smlewis
Mon, 2014-04-21 06:47
Normal topic how to use AbinitioRelax.mpi.linuxgccrelease?
by albumns » Mon, 2012-03-26 22:50 		5
 6,697 by smlewis
Mon, 2014-04-21 06:47
Normal topic python problem?
by albumns » Fri, 2012-03-02 11:03 		1
 2,194 by albumns
Mon, 2014-04-21 06:47
Normal topic Documentation missing in MultiGraft
by aroop » Thu, 2012-03-15 07:39 		2
 3,017 by aroop
Mon, 2014-04-21 06:47
Normal topic redesign a enzyme by fixing the active site
by Lindsay » Wed, 2012-03-07 08:23 		2
 3,069 by Lindsay
Mon, 2014-04-21 06:47
Normal topic Membrane folding - blastpgp error.
by arthuc01 » Sun, 2012-03-25 14:47 		4
 5,805 by arthuc01
Mon, 2014-04-21 06:47
Normal topic a question about loop refinement
by albumns » Fri, 2012-03-02 09:38 		4
 5,547 by albumns
Mon, 2014-04-21 06:47
Normal topic AnchoredPDBcreator
by spraha » Wed, 2012-03-14 23:34 		3
 3,583 by smlewis
Mon, 2014-04-21 06:47
Hot topic Fix back bone design fixbb
by Lindsay » Tue, 2012-03-06 12:30 		26
 22,776 by Anonymous
Mon, 2014-04-21 06:47
Normal topic fixbb design use
by Lindsay » Fri, 2012-03-23 09:05 		2
 2,889 by Lindsay
Mon, 2014-04-21 06:47
Normal topic How to make Rosetta's sampling more aggresive ?
by jiongzhang » Mon, 2012-03-12 11:04 		1
 2,257 by rmoretti
Mon, 2014-04-21 06:47
Normal topic is it possible to generate models without hydrogen?
by albumns » Fri, 2012-03-02 12:24 		9
 8,341 by albumns
Mon, 2014-04-21 06:47
Normal topic Does comparative modeling works for membrane proteins
by justin » Wed, 2012-03-21 04:58 		1
 2,241 by smlewis
Mon, 2014-04-21 06:47
Normal topic Cluster gdtmm vs. rmsd
by brspurri » Thu, 2012-04-19 08:19 		2
 3,959 by rmoretti
Mon, 2014-04-21 06:47
Normal topic possible error in make_fragments.pl and fix
by DanielK » Fri, 2012-04-27 02:21 		0
 1,463 by DanielK
Mon, 2014-04-21 06:47
Normal topic what option should I use if I want to use the dfire in 3.4
by Lindsay » Thu, 2012-04-12 05:19 		3
 3,726 by smlewis
Mon, 2014-04-21 06:47
Normal topic Simple FoldTree Question
by gipsonb » Wed, 2012-04-25 18:19 		3
 3,809 by gipsonb
Mon, 2014-04-21 06:47
Normal topic double mutations scan
by Lindsay » Fri, 2012-04-27 12:51 		2
 3,020 by Lindsay
Mon, 2014-04-21 06:47
Normal topic how to optimize the weights?
by Lindsay » Tue, 2012-04-10 07:40 		7
 6,357 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Possible documentation error
by imurch » Tue, 2012-04-17 00:11 		1
 2,433 by Anonymous
Mon, 2014-04-21 06:47
Normal topic possible error in make_fragments.pl and fix
by DanielK » Fri, 2012-04-27 02:21 		0
 1,622 by DanielK
Mon, 2014-04-21 06:47
Normal topic Energy Calculation in Rosetta3.4
by sdg_lab » Thu, 2012-04-12 04:49 		6
 11,503 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Is there any significant improvement of model generation in rosetta3.4 comparing to rosetta3.3?
by jiongzhang » Fri, 2012-04-20 13:35 		2
 2,923 by rmoretti
Mon, 2014-04-21 06:47
Normal topic possible error in make_fragments.pl and fix
by DanielK » Fri, 2012-04-27 02:23 		2
 2,980 by DanielK
Mon, 2014-04-21 06:47
Hot topic how to make benchmark?
by albumns » Wed, 2012-04-04 05:23 		23
 29,925 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Symmetric Docking (Making Trimer from Monomerics Units)
by sdg_lab » Thu, 2012-04-12 09:21 		1
 2,249 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Picking the correct model from a large set of decoys (30,000+)
by brspurri » Thu, 2012-04-26 15:37 		4
 5,656 by rmoretti
Mon, 2014-04-21 06:47
Normal topic The -symmetry:perturb_rigid_body_dofs flag
by doranhen » Sat, 2012-04-28 13:01 		2
 2,841 by doranhen
Mon, 2014-04-21 06:47
Normal topic symmetric Docking- TRIMER in Rosetta 3.4 ?
by sdg_lab » Thu, 2012-04-12 04:22 		1
 3,575 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Cluster gdtmm vs. rmsd
by brspurri » Thu, 2012-04-19 08:20 		1
 3,559 by rmoretti
Mon, 2014-04-21 06:47
Normal topic possible error in make_fragments.pl and fix
by DanielK » Fri, 2012-04-27 02:23 		0
 1,721 by DanielK
Mon, 2014-04-21 06:47
Normal topic General Protein Folding Question
by twopint23oz » Sun, 2012-04-01 22:57 		7
 6,517 by smlewis
Mon, 2014-04-21 06:47
Normal topic Energy and RG in the new rosetta3.4 ( like RG_Energy.cc and RG_Energy_Fast.cc )
by sdg_lab » Thu, 2012-04-12 08:49 		1
 2,072 by smlewis
Mon, 2014-04-21 06:47
Normal topic what's the difference between recovery and sequence identity
by Lindsay » Thu, 2012-04-26 05:46 		3
 4,950 by smlewis
Mon, 2014-04-21 06:47
Normal topic Problem with clustering 1000 centroid pdbs
by doranhen » Sat, 2012-04-28 10:34 		6
 6,627 by doranhen
Mon, 2014-04-21 06:47
Normal topic what is minirosetta
by Lindsay » Tue, 2012-04-10 07:48 		2
 9,848 by Lindsay
Mon, 2014-04-21 06:47
Normal topic force point mutation with fixbb
by Anonymous » Wed, 2012-06-13 09:15 		3
 3,967 by smlewis
Mon, 2014-04-21 06:47
Normal topic how to set the output name for fixbb design
by Lindsay » Mon, 2012-04-30 09:32 		1
 2,169 by smlewis
Mon, 2014-04-21 06:47
Normal topic fixbb program
by Lindsay » Tue, 2012-05-08 13:56 		3
 3,468 by AndrewLeaver-Fay
Mon, 2014-04-21 06:47
Normal topic what is "-relax:sequence" ?
by Anonymous » Fri, 2012-06-08 06:31 		10
 9,232 by smlewis
Mon, 2014-04-21 06:47
Normal topic Comparative modelling of dimer
by rt1108 » Fri, 2012-06-15 07:31 		1
 2,778 by smlewis
Mon, 2014-04-21 06:47
Normal topic Don't want to output the design structure
by Lindsay » Wed, 2012-05-02 08:02 		6
 5,736 by Anonymous
Mon, 2014-04-21 06:47
Normal topic Question regarding Mlipo score
by DanielK » Tue, 2012-05-29 02:04 		4
 4,860 by smlewis
Mon, 2014-04-21 06:47
Normal topic Biopython error in mac os x
by vinodh » Tue, 2012-06-12 12:23 		3
 4,310 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic tyrosine structure error
by dave » Mon, 2012-04-30 04:38 		1
 2,196 by frichter
Mon, 2014-04-21 06:47
Normal topic Rosetta reference energy
by Lindsay » Mon, 2012-05-07 07:56 		9
 9,511 by Lindsay
Mon, 2014-04-21 06:47
Normal topic two questions about "Prepare structures for use in Rosetta"
by Anonymous » Wed, 2012-06-06 08:13 		6
 6,055 by Anonymous
Mon, 2014-04-21 06:47
Normal topic decoy vs pose
by Anonymous » Fri, 2012-06-15 02:46 		1
 2,751 by smlewis
Mon, 2014-04-21 06:47
Normal topic total energy score of the pdb structure
by Lindsay » Tue, 2012-05-01 12:14 		4
 6,418 by Lindsay
Mon, 2014-04-21 06:47
Hot topic Speeding up docking to a large complex
by skovacs » Thu, 2012-05-10 20:50 		30
 28,021 by smlewis
Mon, 2014-04-21 06:47
Normal topic about Residue Number in Rosetta
by jiongzhang » Mon, 2012-06-11 14:58 		7
 10,523 by smlewis
Mon, 2014-04-21 06:47
Normal topic symmetric docking application rosetta3.2: the docking_local_refine flag
by doranhen » Sun, 2012-05-06 02:20 		2
 3,201 by doranhen
Mon, 2014-04-21 06:47
Normal topic Questions about Monte Carlo Simulated Annealing algorithm in the design protocols
by mdyini » Thu, 2012-05-31 12:39 		3
 5,641 by smlewis
Mon, 2014-04-21 06:47
Normal topic Warning when running cluster program
by Anonymous » Fri, 2012-06-15 02:39 		14
 11,682 by Anonymous
Mon, 2014-04-21 06:47
Normal topic Fixed bb design with hydrogen bond constraint
by bharat_46010 » Mon, 2012-04-30 22:56 		6
 5,996 by smlewis
Mon, 2014-04-21 06:47
Normal topic hydrophobicity patch
by Lindsay » Fri, 2012-05-04 08:24 		7
 9,230 by Lindsay
Mon, 2014-04-21 06:47
Normal topic How to get multiple chains in PDB from Fold and Dock
by arthuc01 » Tue, 2012-05-29 02:05 		9
 9,260 by arthuc01
Mon, 2014-04-21 06:47
Normal topic spline constraint
by jadolfbr » Mon, 2012-06-25 04:43 		3
 4,000 by smlewis
Mon, 2014-04-21 06:47
Normal topic Error running design in 3.4
by inder » Thu, 2012-07-05 19:27 		2
 3,543 by inder
Mon, 2014-04-21 06:47
Normal topic How to import SymmDock models into Rosetta for local docking and energy minimization
by devroop » Fri, 2012-07-20 13:20 		1
 3,245 by smlewis
Mon, 2014-04-21 06:47
Hot topic RNA Denovo RMSD data
by eremma » Thu, 2012-08-02 01:40 		31
 26,944 by eremma
Mon, 2014-04-21 06:47
Normal topic The design of a helical peptide
by Jacob-kong » Tue, 2012-06-26 06:26 		6
 8,241 by Jacob-kong
Mon, 2014-04-21 06:47
Normal topic unknown constraint function type: AtomPair ?
by jiongzhang » Sun, 2012-07-15 02:13 		4
 4,475 by jiongzhang
Mon, 2014-04-21 06:47
Normal topic How to insert a TER line between docking partners
by devroop » Sun, 2012-07-29 13:48 		1
 3,236 by smlewis
Mon, 2014-04-21 06:47
Normal topic postive score models from AbinitioRelax
by xpzhang » Fri, 2012-06-22 12:34 		4
 4,243 by smlewis
Mon, 2014-04-21 06:47
Normal topic How to site the scoring application in rosetta3.1?
by doranhen » Thu, 2012-07-05 10:07 		1
 2,477 by smlewis
Mon, 2014-04-21 06:47
Normal topic protein protein docking pipeline
by dzhao » Thu, 2012-07-19 06:25 		4
 5,928 by smlewis
Mon, 2014-04-21 06:47
Normal topic Scoring when the protein is a different length
by gw » Wed, 2012-08-01 08:53 		1
 2,915 by smlewis
Mon, 2014-04-21 06:47
Normal topic Discarding atoms for fixbb
by Jacob-kong » Tue, 2012-06-26 06:23 		4
 5,384 by Jacob-kong
Mon, 2014-04-21 06:47
Normal topic optH flag makes hydrogen bond energy scores worse...
by tsjain » Fri, 2012-07-13 14:04 		6
 6,712 by smlewis
Mon, 2014-04-21 06:47
Normal topic Flexible backbone design using PSSM
by kalicuta » Thu, 2012-07-26 13:38 		4
 5,026 by rmoretti
Mon, 2014-04-21 06:47
Normal topic How to generate a symmetry definition file for octahedral symmetry?
by Anonymous » Wed, 2012-08-15 05:20 		0
 2,497 by Anonymous
Mon, 2014-04-21 06:47
Normal topic Does the energy score output by fixbb design have unit?
by Lindsay » Mon, 2012-06-18 15:03 		2
 3,112 by Lindsay
Mon, 2014-04-21 06:47
Normal topic Need help with compilation (How to test if compilation is sucessful)
by greenfur » Fri, 2012-06-29 12:29 		1
 3,042 by smlewis
Mon, 2014-04-21 06:47
Normal topic Loop Modelling: ERROR: switch_to_residue_type_set fails
by smiruthi » Wed, 2012-07-18 14:48 		2
 3,590 by smlewis
Mon, 2014-04-21 06:47
Normal topic how to output a structure when scoring it?
by tianbu » Tue, 2012-07-31 09:38 		3
 4,197 by rmoretti
Mon, 2014-04-21 06:47
Normal topic prepack vs. relax with bb_cst
by Anonymous » Mon, 2012-06-25 06:50 		1
 2,584 by smlewis
Mon, 2014-04-21 06:47
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