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Rosetta 3 - General
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pKa prediction using the Rosetta scoring function by das » Tue, 2016-06-21 06:42 |
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1,630 |
by ssrb Tue, 2016-07-12 10:02 |
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No output with docking full protocol by JulienO » Mon, 2016-05-30 02:08 |
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1,630 |
by rmoretti Tue, 2016-07-12 08:40 |
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Amino acid post-translational modifications by aelatico » Tue, 2018-06-19 03:29 |
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1,632 |
by smlewis Tue, 2018-06-19 10:31 |
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perturb_temp flag by Loki01 » Tue, 2018-11-27 05:06 |
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1,636 |
by rmoretti Wed, 2019-04-03 09:58 |
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Problem running make_fragments.pl script by anirbanzz » Thu, 2010-04-22 01:27 |
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1,639 |
by anirbanzz Mon, 2014-04-21 06:47 |
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Antibody Modeling Question by rbehan » Fri, 2016-02-05 13:57 |
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1,640 |
by jadolfbr Fri, 2016-02-05 15:32 |
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Does Rosetta have a separate refinement function? by ylwang » Tue, 2019-09-24 19:08 |
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1,641 |
by ylwang Tue, 2019-10-08 18:34 |
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I got so many atoms in one residue by ylwang » Tue, 2020-03-24 04:40 |
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1,641 |
by ylwang Tue, 2020-03-24 19:35 |
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Misleading error message by renedominik » Tue, 2019-03-12 01:19 |
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1,642 |
by vmulligan Tue, 2019-03-26 11:30 |
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recommended function type for cross links data by meravb » Sun, 2018-08-05 06:57 |
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1,645 |
by rmoretti Mon, 2018-08-20 11:51 |
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Using FastSAXS Scoring Protocol by jurkm » Tue, 2011-09-20 07:40 |
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1,670 |
by jurkm Mon, 2014-04-21 06:47 |
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Undocumented changes in BackrubDD by abhi_pe_acharya » Mon, 2018-07-16 00:24 |
2 |
1,678 |
by abhi_pe_acharya Sun, 2018-08-05 22:03 |
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Issue with Loop Analyzer Mover ouput by abhi_pe_acharya » Mon, 2018-04-30 09:55 |
2 |
1,683 |
by abhi_pe_acharya Mon, 2018-04-30 22:54 |
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Rosetta Resfile header by G Mustafa » Mon, 2020-01-20 06:45 |
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1,684 |
by G Mustafa Tue, 2020-01-21 06:04 |
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Design on NMR template by enoee » Wed, 2010-07-21 05:29 |
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1,696 |
by smlewis Mon, 2014-04-21 06:47 |
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new installation on local computer problem by lqzhang » Mon, 2010-02-01 08:41 |
1 |
1,701 |
by smlewis Mon, 2014-04-21 06:47 |
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Expanding the silent file by jharamesh » Fri, 2018-01-12 09:15 |
2 |
1,703 |
by rmoretti Mon, 2018-01-15 14:35 |
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Add hemes to cytochrome structures by BuddySphinx » Sun, 2018-12-16 13:46 |
2 |
1,705 |
by rmoretti Fri, 2019-03-29 14:43 |
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error message of runing make_fragment by joseph » Fri, 2010-11-12 11:46 |
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1,708 |
by joseph Mon, 2014-04-21 06:47 |
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extract 10001+ pdbs by viochemist » Thu, 2010-07-29 16:25 |
1 |
1,709 |
by smlewis Mon, 2014-04-21 06:47 |
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RNA add/modify residues by galvaner » Fri, 2015-09-18 05:49 |
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1,715 |
by rmoretti Sat, 2015-09-19 13:20 |
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loop modeling by bharat_46010 » Thu, 2015-08-06 01:34 |
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1,718 |
by rmoretti Thu, 2015-08-06 09:28 |
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Question about CartesianMD by orionshih » Sun, 2018-04-29 21:07 |
2 |
1,719 |
by orionshih Tue, 2018-05-01 21:16 |
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Why is it called Rosetta? by cossio » Sun, 2016-03-13 14:28 |
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1,722 |
by smlewis Sun, 2016-03-13 15:25 |
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I've got two doubts by jrcf » Sun, 2016-01-10 07:45 |
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1,723 |
by smlewis Sun, 2016-01-10 10:02 |
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missing amino acid by berk » Fri, 2013-06-14 06:07 |
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1,723 |
by smlewis Mon, 2014-04-21 06:48 |
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[dev] not seeing energy in pose row for new energy term in design by ipetrik_ambry » Fri, 2017-03-03 13:16 |
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1,725 |
by ipetrik_ambry Tue, 2017-03-14 14:09 |
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AbInitioRelax.mpi Hangs - Waiting for Job Request by nleroy » Thu, 2019-10-31 07:30 |
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1,728 |
by nleroy Fri, 2019-11-08 12:44 |
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Extremely low interface scores with "local refinement" by eminegenetics » Wed, 2017-03-29 12:24 |
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1,730 |
by rmoretti Wed, 2017-03-29 12:37 |
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unidentifiable C++ exception in both linux and window. by wajidarshad » Tue, 2015-10-27 08:12 |
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1,733 |
by rmoretti Tue, 2015-10-27 08:46 |
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Interpreting decoy ensemble by lah435 » Wed, 2015-06-10 10:25 |
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1,735 |
by rmoretti Fri, 2015-07-03 13:51 |
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Divide larger low-res. global run into several smaller runs? by jasnyderjr » Mon, 2015-12-21 17:41 |
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1,739 |
by smlewis Tue, 2015-12-22 08:31 |
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scoring function changed from 2.3? by jarod » Mon, 2010-04-12 18:56 |
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1,740 |
by smlewis Mon, 2014-04-21 06:47 |
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Error running RosettaAntibodyDesign application by SenyorDrew » Mon, 2017-10-30 08:13 |
1 |
1,745 |
by jadolfbr Wed, 2017-11-01 10:11 |
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Segmentation fault (core dumped) denovo_density.linuxgccrelease by ahmadkhalifa » Sun, 2018-04-15 17:52 |
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1,745 |
by smlewis Mon, 2018-04-16 16:32 |
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Scoring Centroid Structures by Trentage » Sun, 2010-03-28 19:21 |
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1,747 |
by Trentage Mon, 2014-04-21 06:47 |
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MakeRotLib by yinasun » Fri, 2019-07-26 02:18 |
2 |
1,749 |
by jalan Sun, 2020-04-12 08:01 |
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Where is the flag -preserve_input_cb? by mdyini » Wed, 2011-03-09 14:40 |
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1,751 |
by smlewis Mon, 2014-04-21 06:47 |
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Feedback for Loopmodeling module by zharmad » Tue, 2013-05-14 03:22 |
1 |
1,754 |
by rmoretti Mon, 2014-04-21 06:47 |
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symmetric design without symmetrizing the structure by sdh_h » Tue, 2016-09-13 05:49 |
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1,755 |
by rmoretti Tue, 2016-09-13 07:41 |
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Errors Rosetta symm refine by ms4392 » Fri, 2016-10-21 13:56 |
1 |
1,757 |
by rmoretti Mon, 2016-11-14 14:26 |
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Building Rosetta PROBLEM by nunesjulioc » Fri, 2010-02-26 06:03 |
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1,761 |
by smlewis Mon, 2014-04-21 06:47 |
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Model Extraction by mdweirna » Tue, 2010-04-13 15:28 |
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1,765 |
by smlewis Mon, 2014-04-21 06:47 |
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meaning of the clustering the output files by phanvy » Tue, 2014-06-24 07:11 |
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1,768 |
by rmoretti Tue, 2014-07-01 12:07 |
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problems in building rosetta3.1 (solved) by zpliu09 » Wed, 2010-03-31 02:03 |
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1,772 |
by smlewis Mon, 2014-04-21 06:47 |
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Repeating sequence in Rosetta de novo protein folding by orionshih » Wed, 2018-02-07 20:52 |
2 |
1,772 |
by sheehajh Thu, 2018-02-08 21:18 |
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replace a short helix by berk » Wed, 2013-06-05 10:19 |
1 |
1,773 |
by rmoretti Mon, 2014-04-21 06:48 |
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non-canonical residues parametrisation by DmitriiN » Tue, 2016-04-05 02:37 |
1 |
1,775 |
by rmoretti Fri, 2016-04-08 08:43 |
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Paper about Plexpepdock by phanvy » Wed, 2014-06-18 06:29 |
1 |
1,777 |
by nawsad Fri, 2014-06-20 03:00 |
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Docking with glutathione by phanvy » Wed, 2015-04-29 22:25 |
1 |
1,779 |
by rmoretti Thu, 2015-04-30 07:13 |
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build rosetta by cross-platform compiler by jarod » Fri, 2010-05-07 21:49 |
1 |
1,784 |
by smlewis Mon, 2014-04-21 06:47 |
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How to specify residue numbers in a resfile for a batch of pdbs, while some of them have missing residue numbers? by johnnytam100 » Wed, 2019-05-08 02:30 |
2 |
1,784 |
by johnnytam100 Wed, 2019-05-15 18:45 |
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max_nn by anusmita_sahoo » Thu, 2010-03-11 02:21 |
1 |
1,793 |
by smlewis Mon, 2014-04-21 06:47 |
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Installing on windows using MinGW by abdullah_ahmed » Wed, 2010-09-15 08:45 |
1 |
1,794 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta: Clustering by sskim » Sat, 2016-06-11 14:44 |
1 |
1,795 |
by rmoretti Tue, 2016-07-12 08:36 |
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Problems with parametrisation by DmitriiN » Fri, 2016-05-27 04:51 |
1 |
1,802 |
by rmoretti Tue, 2016-07-12 08:43 |
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Site-wide installations and 64-bit builds by bene » Tue, 2009-10-20 10:16 |
1 |
1,803 |
by smlewis Mon, 2014-04-21 06:47 |
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Total Rama Score by jcminerlanl » Thu, 2018-05-10 07:19 |
1 |
1,804 |
by rmoretti Thu, 2018-06-28 14:28 |
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Compilation error by zgcarvalho » Fri, 2010-02-12 06:58 |
1 |
1,805 |
by smlewis Mon, 2014-04-21 06:47 |
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Custom fold tree by lah435 » Tue, 2015-03-03 12:02 |
1 |
1,806 |
by rmoretti Mon, 2015-03-30 16:38 |
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Is there a way to calculate chi1 and chi1+chi differences between two structures? by sn » Thu, 2017-04-20 21:46 |
1 |
1,809 |
by rmoretti Fri, 2017-04-21 07:52 |
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Rosetta and SAM 3.5! by wtscrystal » Sat, 2009-11-14 22:49 |
0 |
1,809 |
by wtscrystal Mon, 2014-04-21 06:47 |
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Running the Matcher on multiple PDBs by Jhreed » Thu, 2016-02-18 08:50 |
1 |
1,810 |
by rmoretti Sun, 2016-02-21 06:38 |
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What is the best way to make a residue-specific SASA constraint? by jmaly » Thu, 2020-01-23 16:40 |
2 |
1,810 |
by matteoferla Wed, 2020-01-29 12:18 |
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Plexpepdock with Zn by phanvy » Sun, 2014-06-22 22:40 |
1 |
1,812 |
by nawsad Wed, 2014-06-25 13:26 |
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Partial homology modeling in Rosetta by al614 » Mon, 2016-10-31 12:30 |
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1,826 |
by rmoretti Mon, 2016-11-14 15:12 |
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How do the homology sequences exclude from fragment files? by exchhattu » Mon, 2010-04-05 03:04 |
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1,828 |
by smlewis Mon, 2014-04-21 06:47 |
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the output of ligand docking by phanvy » Fri, 2015-07-03 01:27 |
1 |
1,829 |
by rmoretti Fri, 2015-07-03 13:14 |
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Rosetta matching error by purvi24 » Mon, 2018-03-12 02:38 |
1 |
1,829 |
by smlewis Mon, 2018-03-12 09:57 |
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adding NCAA to the N-terminal of RCSB pdb by ate » Tue, 2021-06-08 08:24 |
4 |
1,830 |
by Subhrodeep Saha Sat, 2021-06-19 07:17 |
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Do Rosetta support hydroxide(OH-) and oxide(O2-) params? by dasdevashishdas » Thu, 2018-08-16 21:15 |
2 |
1,840 |
by dasdevashishdas Thu, 2018-08-23 18:02 |
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Energy and RG in the new rosetta3.4 ( like RG_Energy.cc and RG_Energy_Fast.cc ) by sdg_lab » Thu, 2012-04-12 08:49 |
1 |
1,843 |
by smlewis Mon, 2014-04-21 06:47 |
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unit and scientific tests by tricia » Sat, 2009-05-09 23:29 |
1 |
1,844 |
by smlewis Mon, 2014-04-21 06:47 |
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setup_run error with multiple resonance lists by aep » Fri, 2016-03-18 13:36 |
1 |
1,845 |
by rmoretti Thu, 2016-04-28 15:49 |
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rebuilding and refinement by exchhattu » Tue, 2009-10-06 21:13 |
1 |
1,846 |
by smlewis Mon, 2014-04-21 06:47 |
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params file for beta-amino acids by phonez » Mon, 2021-03-29 18:30 |
4 |
1,848 |
by everyday847 Thu, 2021-04-01 11:59 |
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How NMR structures can be inputted to Rosetta? by exchhattu » Mon, 2015-02-09 17:44 |
1 |
1,849 |
by rmoretti Wed, 2015-02-18 09:19 |
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How did you begin to learn Rosetta? by mdeklotz » Mon, 2018-07-30 10:08 |
1 |
1,851 |
by jkleman Tue, 2018-07-31 13:19 |
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Loop Insertion/Extension using rosetta suite by bharat_46010 » Mon, 2011-02-28 04:45 |
1 |
1,852 |
by smlewis Mon, 2014-04-21 06:47 |
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About generating Fullatom structures by wszjzhang » Wed, 2010-03-24 19:27 |
1 |
1,853 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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"Illegal Instruction" for particular Movers/Filters by Jhreed » Thu, 2016-08-11 12:59 |
1 |
1,866 |
by smlewis Thu, 2016-08-11 13:16 |
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Does Rosetta have a class diagram for each class in the source code? by ylwang » Thu, 2019-11-21 04:24 |
3 |
1,868 |
by ylwang Sat, 2019-11-23 06:26 |
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Problem with protein and ligand preparation before ligand docking. by zg148119@ohio.edu » Fri, 2021-02-05 06:47 |
3 |
1,868 |
by rmoretti Tue, 2021-02-09 09:22 |
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RASREC full_run vs. test_run by Lati » Wed, 2015-10-28 03:26 |
1 |
1,869 |
by Lati Fri, 2015-11-20 03:32 |
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Plexpepdock with Zn by phanvy » Wed, 2014-06-25 06:10 |
1 |
1,874 |
by rmoretti Tue, 2014-11-04 10:35 |
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Available of some protocals mentioned in publications by SunH » Mon, 2013-09-09 20:47 |
1 |
1,874 |
by rmoretti Mon, 2014-04-21 06:48 |
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fragment_picker error secondarysimilarity.cc line:132 by leanawen » Mon, 2013-04-15 14:33 |
1 |
1,876 |
by smlewis Mon, 2014-04-21 06:47 |
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run:test_cycles by ramin » Sun, 2013-03-10 11:05 |
1 |
1,877 |
by smlewis Mon, 2014-04-21 06:47 |
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Modeling by hwillis » Wed, 2009-08-12 11:07 |
1 |
1,882 |
by frichter Mon, 2014-04-21 06:47 |
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Issues running the Matcher in 3.4 and 3.5 by Jhreed » Tue, 2015-05-26 11:38 |
1 |
1,882 |
by rmoretti Wed, 2015-06-17 12:43 |
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Could the Relax step be used separately ? （solved） by wszjzhang » Tue, 2010-03-30 15:00 |
1 |
1,887 |
by smlewis Mon, 2014-04-21 06:47 |
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Domain Insertion equivalent in Rosetta 3.2 by SenyorDrew » Wed, 2011-02-09 09:47 |
1 |
1,888 |
by smlewis Mon, 2014-04-21 06:47 |
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demo documentation by lshi » Fri, 2009-08-28 08:51 |
1 |
1,892 |
by smlewis Mon, 2014-04-21 06:47 |
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rosetta compile by MA » Wed, 2017-04-26 00:46 |
2 |
1,892 |
by MA Thu, 2017-04-27 18:53 |
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docking using rosetta3.1 and rosetta2.3 leads to very different results by lqzhang » Thu, 2010-01-14 11:54 |
1 |
1,892 |
by sid Mon, 2014-04-21 06:47 |
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Fitting a structure with an unrecognized residue to an EM density by ahmadkhalifa » Tue, 2017-12-05 14:44 |
2 |
1,892 |
by ahmadkhalifa Wed, 2017-12-06 12:30 |
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have trouble with "relax" models by wszjzhang » Thu, 2010-01-28 10:02 |
1 |
1,894 |
by smlewis Mon, 2014-04-21 06:47 |
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Get nchi for heavy atoms by pachecoj » Tue, 2014-11-04 19:04 |
1 |
1,896 |
by rmoretti Tue, 2014-11-11 13:22 |
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Atom_.cc line 304 by fred » Thu, 2014-09-11 12:04 |
1 |
1,896 |
by rmoretti Fri, 2014-09-12 09:11 |
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optimisation of a protein-protein interface by sdh_h » Thu, 2017-05-04 05:06 |
1 |
1,897 |
by rmoretti Mon, 2017-05-15 09:03 |
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