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Rosetta 3 - General
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Multi-state design with the error "unable to locate database file" by yifeili1983 » Sun, 2019-03-31 18:30 |
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1,787 |
by rmoretti Wed, 2019-04-03 09:31 |
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Antibody Modeling Question by rbehan » Fri, 2016-02-05 13:57 |
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1,790 |
by jadolfbr Fri, 2016-02-05 15:32 |
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Flag to not use PDB ligands by matteoferla » Wed, 2019-08-21 10:14 |
2 |
1,792 |
by matteoferla Wed, 2019-08-21 11:58 |
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Rotate chain by Germanico » Sun, 2021-05-09 16:36 |
3 |
1,794 |
by danpf Mon, 2021-05-10 10:04 |
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Missing atoms, unable to fill in missing atoms by kwu030 » Fri, 2023-05-05 12:58 |
12 |
1,801 |
by kwu030 Thu, 2023-05-18 08:31 |
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Enumeration of Amino Acid identities by achambe » Wed, 2016-06-15 15:28 |
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1,802 |
by rmoretti Wed, 2016-06-15 16:06 |
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De novo backbone trace from fragments by Victor Tobiasson » Tue, 2020-12-22 06:34 |
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1,804 |
by Victor Tobiasson Tue, 2020-12-22 09:18 |
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MSDMover error in RECON protocol by yifeili1983 » Mon, 2019-04-01 00:44 |
2 |
1,804 |
by yifeili1983 Mon, 2019-04-15 22:34 |
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No output with docking full protocol by JulienO » Mon, 2016-05-30 02:08 |
1 |
1,806 |
by rmoretti Tue, 2016-07-12 08:40 |
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Protein Interface Design using PSSM by ccruz » Sun, 2020-05-24 14:27 |
1 |
1,809 |
by nannemdp Tue, 2020-05-26 06:33 |
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error message of runing make_fragment by joseph » Fri, 2010-11-12 11:46 |
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1,811 |
by joseph Mon, 2014-04-21 06:47 |
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protein surface design by tatsiana.bylund » Sun, 2019-09-15 03:44 |
2 |
1,811 |
by dfcoelho Tue, 2019-11-19 10:16 |
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MPI optimization on TACC stampede2 HPC by rlwoltz » Tue, 2021-03-16 18:07 |
2 |
1,815 |
by rlwoltz Wed, 2021-03-24 22:36 |
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pKa prediction using the Rosetta scoring function by das » Tue, 2016-06-21 06:42 |
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1,818 |
by ssrb Tue, 2016-07-12 10:02 |
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Rosetta structure refinement alters bound ligand by ahmadkhalifa » Mon, 2018-07-23 07:49 |
1 |
1,832 |
by rmoretti Fri, 2018-08-03 08:59 |
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Running RosettaScripts, but got an error "src/utility/options/OptionCollection.cc, line 1153, No values of the appropriate type" by zhoubin » Sun, 2021-02-28 08:51 |
3 |
1,835 |
by zhoubin Mon, 2021-03-01 22:11 |
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RosettaMatch Problem by David » Tue, 2019-01-22 12:23 |
0 |
1,842 |
by David Tue, 2019-01-22 12:23 |
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new installation on local computer problem by lqzhang » Mon, 2010-02-01 08:41 |
1 |
1,848 |
by smlewis Mon, 2014-04-21 06:47 |
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Amino acid post-translational modifications by aelatico » Tue, 2018-06-19 03:29 |
1 |
1,848 |
by smlewis Tue, 2018-06-19 10:31 |
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Does Rosetta have a separate refinement function? by ylwang » Tue, 2019-09-24 19:08 |
2 |
1,850 |
by ylwang Tue, 2019-10-08 18:34 |
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Misleading error message by renedominik » Tue, 2019-03-12 01:19 |
1 |
1,852 |
by vmulligan Tue, 2019-03-26 11:30 |
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Job Distribution Error by ac.research » Mon, 2020-02-10 08:22 |
2 |
1,853 |
by ac.research Fri, 2020-02-14 23:33 |
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Scoring Centroid Structures by Trentage » Sun, 2010-03-28 19:21 |
0 |
1,855 |
by Trentage Mon, 2014-04-21 06:47 |
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pmut and scoring by ldlamini » Tue, 2021-09-14 00:46 |
3 |
1,858 |
by matteoferla Mon, 2021-09-20 06:05 |
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extract 10001+ pdbs by viochemist » Thu, 2010-07-29 16:25 |
1 |
1,862 |
by smlewis Mon, 2014-04-21 06:47 |
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Design on NMR template by enoee » Wed, 2010-07-21 05:29 |
1 |
1,863 |
by smlewis Mon, 2014-04-21 06:47 |
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Method for WebServer Fragment Generation by Jacob_Verburgt » Tue, 2020-06-02 07:29 |
2 |
1,868 |
by Jacob_Verburgt Tue, 2020-06-02 10:26 |
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perturb_temp flag by Loki01 » Tue, 2018-11-27 05:06 |
2 |
1,870 |
by rmoretti Wed, 2019-04-03 09:58 |
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recommended function type for cross links data by meravb » Sun, 2018-08-05 06:57 |
2 |
1,874 |
by rmoretti Mon, 2018-08-20 11:51 |
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RNA add/modify residues by galvaner » Fri, 2015-09-18 05:49 |
1 |
1,882 |
by rmoretti Sat, 2015-09-19 13:20 |
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missing amino acid by berk » Fri, 2013-06-14 06:07 |
1 |
1,882 |
by smlewis Mon, 2014-04-21 06:48 |
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Why is it called Rosetta? by cossio » Sun, 2016-03-13 14:28 |
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1,891 |
by smlewis Sun, 2016-03-13 15:25 |
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loop modeling by bharat_46010 » Thu, 2015-08-06 01:34 |
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1,892 |
by rmoretti Thu, 2015-08-06 09:28 |
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scoring function changed from 2.3? by jarod » Mon, 2010-04-12 18:56 |
1 |
1,896 |
by smlewis Mon, 2014-04-21 06:47 |
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Divide larger low-res. global run into several smaller runs? by jasnyderjr » Mon, 2015-12-21 17:41 |
1 |
1,896 |
by smlewis Tue, 2015-12-22 08:31 |
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unidentifiable C++ exception in both linux and window. by wajidarshad » Tue, 2015-10-27 08:12 |
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1,897 |
by rmoretti Tue, 2015-10-27 08:46 |
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I've got two doubts by jrcf » Sun, 2016-01-10 07:45 |
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1,898 |
by smlewis Sun, 2016-01-10 10:02 |
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Interpreting decoy ensemble by lah435 » Wed, 2015-06-10 10:25 |
1 |
1,898 |
by rmoretti Fri, 2015-07-03 13:51 |
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[dev] not seeing energy in pose row for new energy term in design by ipetrik_ambry » Fri, 2017-03-03 13:16 |
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1,900 |
by ipetrik_ambry Tue, 2017-03-14 14:09 |
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Where is the flag -preserve_input_cb? by mdyini » Wed, 2011-03-09 14:40 |
1 |
1,904 |
by smlewis Mon, 2014-04-21 06:47 |
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Building Rosetta PROBLEM by nunesjulioc » Fri, 2010-02-26 06:03 |
1 |
1,910 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta and SAM 3.5! by wtscrystal » Sat, 2009-11-14 22:49 |
0 |
1,917 |
by wtscrystal Mon, 2014-04-21 06:47 |
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problems in building rosetta3.1 (solved) by zpliu09 » Wed, 2010-03-31 02:03 |
1 |
1,918 |
by smlewis Mon, 2014-04-21 06:47 |
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Undocumented changes in BackrubDD by abhi_pe_acharya » Mon, 2018-07-16 00:24 |
2 |
1,920 |
by abhi_pe_acharya Sun, 2018-08-05 22:03 |
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Paper about Plexpepdock by phanvy » Wed, 2014-06-18 06:29 |
1 |
1,921 |
by nawsad Fri, 2014-06-20 03:00 |
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Segmentation fault (core dumped) denovo_density.linuxgccrelease by ahmadkhalifa » Sun, 2018-04-15 17:52 |
1 |
1,921 |
by smlewis Mon, 2018-04-16 16:32 |
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Model Extraction by mdweirna » Tue, 2010-04-13 15:28 |
1 |
1,922 |
by smlewis Mon, 2014-04-21 06:47 |
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symmetric design without symmetrizing the structure by sdh_h » Tue, 2016-09-13 05:49 |
1 |
1,922 |
by rmoretti Tue, 2016-09-13 07:41 |
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Issue with Loop Analyzer Mover ouput by abhi_pe_acharya » Mon, 2018-04-30 09:55 |
2 |
1,923 |
by abhi_pe_acharya Mon, 2018-04-30 22:54 |
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meaning of the clustering the output files by phanvy » Tue, 2014-06-24 07:11 |
1 |
1,924 |
by rmoretti Tue, 2014-07-01 12:07 |
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I got so many atoms in one residue by ylwang » Tue, 2020-03-24 04:40 |
3 |
1,924 |
by ylwang Tue, 2020-03-24 19:35 |
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Extremely low interface scores with "local refinement" by eminegenetics » Wed, 2017-03-29 12:24 |
1 |
1,924 |
by rmoretti Wed, 2017-03-29 12:37 |
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build rosetta by cross-platform compiler by jarod » Fri, 2010-05-07 21:49 |
1 |
1,927 |
by smlewis Mon, 2014-04-21 06:47 |
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Installing on windows using MinGW by abdullah_ahmed » Wed, 2010-09-15 08:45 |
1 |
1,929 |
by smlewis Mon, 2014-04-21 06:47 |
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Errors Rosetta symm refine by ms4392 » Fri, 2016-10-21 13:56 |
1 |
1,929 |
by rmoretti Mon, 2016-11-14 14:26 |
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max_nn by anusmita_sahoo » Thu, 2010-03-11 02:21 |
1 |
1,935 |
by smlewis Mon, 2014-04-21 06:47 |
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Feedback for Loopmodeling module by zharmad » Tue, 2013-05-14 03:22 |
1 |
1,939 |
by rmoretti Mon, 2014-04-21 06:47 |
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Docking with glutathione by phanvy » Wed, 2015-04-29 22:25 |
1 |
1,939 |
by rmoretti Thu, 2015-04-30 07:13 |
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Error running RosettaAntibodyDesign application by SenyorDrew » Mon, 2017-10-30 08:13 |
1 |
1,942 |
by jadolfbr Wed, 2017-11-01 10:11 |
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replace a short helix by berk » Wed, 2013-06-05 10:19 |
1 |
1,942 |
by rmoretti Mon, 2014-04-21 06:48 |
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Add hemes to cytochrome structures by BuddySphinx » Sun, 2018-12-16 13:46 |
2 |
1,945 |
by rmoretti Fri, 2019-03-29 14:43 |
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Expanding the silent file by jharamesh » Fri, 2018-01-12 09:15 |
2 |
1,946 |
by rmoretti Mon, 2018-01-15 14:35 |
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Compilation error by zgcarvalho » Fri, 2010-02-12 06:58 |
1 |
1,952 |
by smlewis Mon, 2014-04-21 06:47 |
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non-canonical residues parametrisation by DmitriiN » Tue, 2016-04-05 02:37 |
1 |
1,963 |
by rmoretti Fri, 2016-04-08 08:43 |
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Plexpepdock with Zn by phanvy » Sun, 2014-06-22 22:40 |
1 |
1,964 |
by nawsad Wed, 2014-06-25 13:26 |
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Site-wide installations and 64-bit builds by bene » Tue, 2009-10-20 10:16 |
1 |
1,965 |
by smlewis Mon, 2014-04-21 06:47 |
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Question about CartesianMD by orionshih » Sun, 2018-04-29 21:07 |
2 |
1,966 |
by orionshih Tue, 2018-05-01 21:16 |
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LHOC script problem in Rosetta Antibody by ziheng@mit.edu » Thu, 2019-04-25 14:19 |
3 |
1,970 |
by Brian Wiley Sat, 2023-02-04 23:26 |
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Rosetta: Clustering by sskim » Sat, 2016-06-11 14:44 |
1 |
1,981 |
by rmoretti Tue, 2016-07-12 08:36 |
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How do the homology sequences exclude from fragment files? by exchhattu » Mon, 2010-04-05 03:04 |
1 |
1,981 |
by smlewis Mon, 2014-04-21 06:47 |
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Energy and RG in the new rosetta3.4 ( like RG_Energy.cc and RG_Energy_Fast.cc ) by sdg_lab » Thu, 2012-04-12 08:49 |
1 |
1,983 |
by smlewis Mon, 2014-04-21 06:47 |
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Partial homology modeling in Rosetta by al614 » Mon, 2016-10-31 12:30 |
1 |
1,984 |
by rmoretti Mon, 2016-11-14 15:12 |
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Custom fold tree by lah435 » Tue, 2015-03-03 12:02 |
1 |
1,985 |
by rmoretti Mon, 2015-03-30 16:38 |
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Is there a way to calculate chi1 and chi1+chi differences between two structures? by sn » Thu, 2017-04-20 21:46 |
1 |
1,985 |
by rmoretti Fri, 2017-04-21 07:52 |
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the output of ligand docking by phanvy » Fri, 2015-07-03 01:27 |
1 |
1,986 |
by rmoretti Fri, 2015-07-03 13:14 |
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Repeating sequence in Rosetta de novo protein folding by orionshih » Wed, 2018-02-07 20:52 |
2 |
1,988 |
by sheehajh Thu, 2018-02-08 21:18 |
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MakeRotLib by yinasun » Fri, 2019-07-26 02:18 |
2 |
1,990 |
by jalan Sun, 2020-04-12 08:01 |
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rebuilding and refinement by exchhattu » Tue, 2009-10-06 21:13 |
1 |
1,991 |
by smlewis Mon, 2014-04-21 06:47 |
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Total Rama Score by jcminerlanl » Thu, 2018-05-10 07:19 |
1 |
1,996 |
by rmoretti Thu, 2018-06-28 14:28 |
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clean_pdb.py by duz » Wed, 2021-03-24 13:36 |
2 |
1,998 |
by duz Thu, 2021-04-01 09:34 |
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AbInitioRelax.mpi Hangs - Waiting for Job Request by nleroy » Thu, 2019-10-31 07:30 |
2 |
1,998 |
by nleroy Fri, 2019-11-08 12:44 |
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Running the Matcher on multiple PDBs by Jhreed » Thu, 2016-02-18 08:50 |
1 |
2,000 |
by rmoretti Sun, 2016-02-21 06:38 |
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Rosetta Resfile header by G Mustafa » Mon, 2020-01-20 06:45 |
2 |
2,004 |
by G Mustafa Tue, 2020-01-21 06:04 |
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Problems with parametrisation by DmitriiN » Fri, 2016-05-27 04:51 |
1 |
2,008 |
by rmoretti Tue, 2016-07-12 08:43 |
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unit and scientific tests by tricia » Sat, 2009-05-09 23:29 |
1 |
2,008 |
by smlewis Mon, 2014-04-21 06:47 |
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setup_run error with multiple resonance lists by aep » Fri, 2016-03-18 13:36 |
1 |
2,010 |
by rmoretti Thu, 2016-04-28 15:49 |
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About generating Fullatom structures by wszjzhang » Wed, 2010-03-24 19:27 |
1 |
2,014 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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Need help finding the best predicted structure after running ab initio by burkheadlab » Tue, 2011-06-21 11:18 |
0 |
2,019 |
by burkheadlab Mon, 2014-04-21 06:47 |
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Plexpepdock with Zn by phanvy » Wed, 2014-06-25 06:10 |
1 |
2,020 |
by rmoretti Tue, 2014-11-04 10:35 |
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How NMR structures can be inputted to Rosetta? by exchhattu » Mon, 2015-02-09 17:44 |
1 |
2,023 |
by rmoretti Wed, 2015-02-18 09:19 |
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run:test_cycles by ramin » Sun, 2013-03-10 11:05 |
1 |
2,024 |
by smlewis Mon, 2014-04-21 06:47 |
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Loop Insertion/Extension using rosetta suite by bharat_46010 » Mon, 2011-02-28 04:45 |
1 |
2,026 |
by smlewis Mon, 2014-04-21 06:47 |
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RASREC full_run vs. test_run by Lati » Wed, 2015-10-28 03:26 |
1 |
2,031 |
by Lati Fri, 2015-11-20 03:32 |
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have trouble with "relax" models by wszjzhang » Thu, 2010-01-28 10:02 |
1 |
2,036 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta matching error by purvi24 » Mon, 2018-03-12 02:38 |
1 |
2,038 |
by smlewis Mon, 2018-03-12 09:57 |
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Could the Relax step be used separately ? （solved） by wszjzhang » Tue, 2010-03-30 15:00 |
1 |
2,039 |
by smlewis Mon, 2014-04-21 06:47 |
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Domain Insertion equivalent in Rosetta 3.2 by SenyorDrew » Wed, 2011-02-09 09:47 |
1 |
2,040 |
by smlewis Mon, 2014-04-21 06:47 |
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fragment_picker error secondarysimilarity.cc line:132 by leanawen » Mon, 2013-04-15 14:33 |
1 |
2,040 |
by smlewis Mon, 2014-04-21 06:47 |
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Available of some protocals mentioned in publications by SunH » Mon, 2013-09-09 20:47 |
1 |
2,040 |
by rmoretti Mon, 2014-04-21 06:48 |
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Issues running the Matcher in 3.4 and 3.5 by Jhreed » Tue, 2015-05-26 11:38 |
1 |
2,046 |
by rmoretti Wed, 2015-06-17 12:43 |
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