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Rosetta atoms types for enzyme design by bharat_46010 » Thu, 2011-11-10 06:01 |
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3,337 |
by rmoretti Mon, 2014-04-21 06:47 |
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Questions on energy oddities by pachecoj » Wed, 2014-10-15 13:26 |
2 |
2,066 |
by pachecoj Wed, 2014-10-15 15:12 |
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Error score_scatter_plot.py by jrcf » Wed, 2015-12-30 05:46 |
2 |
2,702 |
by jrcf Fri, 2016-02-12 16:41 |
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Structure Prediction: Max Sequence Length? by jcsaborio » Tue, 2009-07-14 12:10 |
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3,241 |
by jcsaborio Mon, 2014-04-21 06:47 |
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ligand dock residue selection by Silice » Wed, 2009-08-12 08:57 |
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2,169 |
by frichter Mon, 2014-04-21 06:47 |
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PUBLICATION using Rosetta as a method by phanvy » Thu, 2014-06-19 08:33 |
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2,364 |
by phanvy Sun, 2014-06-22 23:29 |
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Another request for help with restarts by jasnyderjr » Tue, 2015-08-18 12:14 |
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2,292 |
by rmoretti Tue, 2015-08-18 17:11 |
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Error Atom_::dihedral_between_bonded_children by abiadak » Mon, 2012-07-30 06:34 |
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3,224 |
by abiadak Mon, 2014-04-21 06:47 |
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B3-protein design using rosettaScript movers by straore » Mon, 2015-03-16 05:05 |
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2,200 |
by straore Fri, 2015-04-17 01:54 |
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Modelling a loopless structure by jhbrown » Tue, 2011-11-22 11:39 |
2 |
2,404 |
by jhbrown Mon, 2014-04-21 06:47 |
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docking mover(s) in rosetta by aaj » Mon, 2016-01-25 02:38 |
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2,060 |
by aaj Mon, 2016-02-22 07:50 |
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Ca-RMSD by jrcf » Mon, 2016-02-29 16:39 |
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2,405 |
by jrcf Tue, 2016-05-03 17:40 |
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Cluster gdtmm vs. rmsd by brspurri » Thu, 2012-04-19 08:19 |
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3,271 |
by rmoretti Mon, 2014-04-21 06:47 |
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The following options have been set but have not yet been used by jrcf » Fri, 2015-10-09 10:48 |
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2,999 |
by jrcf Fri, 2015-10-16 10:57 |
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RifDock building error on Ubuntu 20.04，please help！ by guowuchen » Mon, 2022-03-28 03:53 |
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287 |
by guowuchen Wed, 2022-03-30 04:20 |
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How do I add virtual atom to my cofactor (metal ion) in rosettadock? by monos_morpheus » Sat, 2011-02-05 21:24 |
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2,668 |
by monos_morpheus Mon, 2014-04-21 06:47 |
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Flag to not use PDB ligands by matteoferla » Wed, 2019-08-21 10:14 |
2 |
1,237 |
by matteoferla Wed, 2019-08-21 11:58 |
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activation of filters in rosetta3.0 or later by exchhattu » Thu, 2009-12-03 17:52 |
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2,132 |
by exchhattu Mon, 2014-04-21 06:47 |
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Interface energy vs binding energy by Apiwat » Wed, 2014-02-05 00:47 |
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4,572 |
by Apiwat Sat, 2014-02-08 01:41 |
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-fake_native Error - not found in command line of rosetta 3.2.1 by vsjasion » Wed, 2011-10-05 12:01 |
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2,682 |
by vsjasion Mon, 2014-04-21 06:47 |
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mutate residue at termini by jarek » Fri, 2013-09-13 09:24 |
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3,087 |
by jarek Mon, 2014-04-21 06:48 |
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Cannot create cst files from upl files by road runner » Wed, 2015-11-11 22:07 |
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2,090 |
by road runner Tue, 2015-12-01 10:08 |
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all-atom refinement with Relax application by zwenthor » Mon, 2010-02-15 22:45 |
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2,252 |
by zwenthor Mon, 2014-04-21 06:47 |
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keep crystal structure hydrogens by gw » Wed, 2011-07-20 03:54 |
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2,668 |
by gw Mon, 2014-04-21 06:47 |
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How to remove clashes in peptide bonds and proline residue? by Anatol » Fri, 2012-08-31 09:26 |
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2,478 |
by Anatol Mon, 2014-04-21 06:47 |
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constrain files tutorial by knutjbj » Fri, 2011-02-18 23:57 |
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2,107 |
by smlewis Mon, 2014-04-21 06:47 |
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ERROR: filtered_alignments.size() > 0 by jhbrown » Tue, 2012-01-17 13:28 |
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1,989 |
by jhbrown Mon, 2014-04-21 06:47 |
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Error running design in 3.4 by inder » Thu, 2012-07-05 19:27 |
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2,950 |
by inder Mon, 2014-04-21 06:47 |
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smoothly kill a mpirun process by fred » Tue, 2014-02-18 06:06 |
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4,474 |
by Ashafix Wed, 2014-02-19 06:53 |
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Good baseline settings for side chain packing by pachecoj » Tue, 2015-01-13 19:25 |
2 |
3,439 |
by rmoretti Wed, 2015-01-21 10:05 |
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rosetta compile by MA » Wed, 2017-04-26 00:46 |
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1,604 |
by MA Thu, 2017-04-27 18:53 |
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Explanation of constraint functions? by aloshbau » Mon, 2015-12-14 22:38 |
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1,865 |
by aloshbau Mon, 2015-12-14 23:30 |
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error in mol2 to params conversion for GAliganddocking by jalan » Wed, 2020-04-22 06:08 |
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1,148 |
by jalan Thu, 2020-04-23 05:19 |
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Chain name being read as residue by MarkusAurelius » Mon, 2021-03-22 11:19 |
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720 |
by MarkusAurelius Mon, 2021-03-29 09:06 |
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score.sc only shows total_score and with all zeros by johnnytam100 » Mon, 2022-06-06 20:04 |
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95 |
by johnnytam100 Tue, 2022-06-07 19:18 |
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Peptide building by berk » Thu, 2015-07-30 06:53 |
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2,265 |
by rmoretti Thu, 2015-08-06 09:21 |
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How to allow rosetta to recognize the ASP and protonated ASP? by Jeffrey_Chen » Mon, 2014-03-24 20:34 |
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3,066 |
by Jeffrey_Chen Tue, 2014-03-25 23:06 |
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Free FSC score for validating refinement by ahmadkhalifa » Thu, 2018-05-10 05:53 |
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1,664 |
by ahmadkhalifa Fri, 2018-06-29 07:54 |
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Abinitio Structure Prediction - Sanity Test by westleys » Tue, 2010-06-01 00:28 |
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2,343 |
by westleys Mon, 2014-04-21 06:47 |
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Predict the N-terminal of a protein by aliaselin » Mon, 2010-11-08 03:23 |
2 |
2,017 |
by smlewis Mon, 2014-04-21 06:47 |
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No structure mods allowed during scoring! error by jadolfbr » Wed, 2013-12-04 14:06 |
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2,515 |
by jadolfbr Mon, 2014-04-21 06:48 |
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make fragments for a loop by jarod » Mon, 2010-03-15 07:31 |
2 |
2,243 |
by jarod Mon, 2014-04-21 06:47 |
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Creation of core.* file in current running directory by alejandro » Tue, 2011-12-06 06:19 |
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2,525 |
by alejandro Mon, 2014-04-21 06:47 |
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Multigraft by bo » Tue, 2013-12-24 18:06 |
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2,549 |
by Sergey Menis Mon, 2014-04-21 06:48 |
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Meaning of a couple terms? by aloshbau » Sun, 2016-02-07 16:48 |
2 |
1,865 |
by aloshbau Sun, 2016-02-14 20:14 |
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Rosetta Double changing mmCIF chain ID by Victor Tobiasson » Thu, 2021-05-13 07:57 |
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736 |
by Victor Tobiasson Thu, 2021-05-13 08:33 |
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Connecting 2 Domains Via Non-Flexible Linker by jurkm » Mon, 2011-09-05 06:10 |
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4,826 |
by kbuhr Tue, 2015-07-14 04:30 |
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Symmetric Processing for evaluating side-chain of chi angle by qlj » Wed, 2012-10-10 04:08 |
2 |
2,336 |
by smlewis Mon, 2014-04-21 06:47 |
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minimum number of nstruct to build at 65% homolgy by MRH » Thu, 2013-08-22 07:29 |
2 |
2,303 |
by MRH Mon, 2014-04-21 06:48 |
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Working through tutorials: expected output scorces differ from calculated results by j.schmue » Sat, 2020-01-18 13:16 |
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1,098 |
by j.schmue Tue, 2020-01-28 13:31 |
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Fragment file viewers by MajorID » Fri, 2012-02-24 20:57 |
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2,199 |
by smlewis Mon, 2014-04-21 06:47 |
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Cluster application, How does it sort decoys by energy? by Apiwat » Wed, 2014-04-16 01:52 |
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2,273 |
by Apiwat Thu, 2014-04-17 09:56 |
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"caught exception" for PDB with membrane "DUM" residues by nitroamos » Wed, 2018-05-30 08:35 |
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2,684 |
by Awagner7 Tue, 2020-04-28 10:51 |
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RosettaDOM by ndousis » Sun, 2010-12-12 01:08 |
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2,527 |
by ndousis Mon, 2014-04-21 06:47 |
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is there a preferred way to enforce an hydrogen bond ? by logandonaldson » Wed, 2013-03-20 13:14 |
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2,192 |
by rmoretti Mon, 2014-04-21 06:47 |
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Fragment picker by phanvy » Mon, 2014-12-08 04:25 |
2 |
2,468 |
by phanvy Wed, 2014-12-10 00:17 |
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InterfaceAnalyzer atom subset by Parker.deWaal » Sun, 2016-03-13 13:41 |
2 |
2,077 |
by rmoretti Mon, 2016-03-14 07:58 |
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Data Check for a newb by ac.research » Sun, 2017-03-12 23:42 |
2 |
1,738 |
by ac.research Fri, 2017-03-31 07:36 |
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make_fragments by ctaylor » Mon, 2009-09-21 12:41 |
2 |
2,243 |
by ctaylor Mon, 2014-04-21 06:47 |
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weird prolines with hydroxyls from fixbb.linuxgccrelease by louisclark » Wed, 2010-08-25 15:01 |
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2,220 |
by louisclark Mon, 2014-04-21 06:47 |
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Having trouble producing a .pdb file from a silent output file after running abinitio relax by burkheadlab » Wed, 2011-03-09 12:48 |
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2,372 |
by burkheadlab Mon, 2014-04-21 06:47 |
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Adding noncanonical amino acid (PCA) to Rosetta 3 by JuliusSu » Fri, 2014-08-01 11:23 |
2 |
3,240 |
by JuliusSu Fri, 2014-08-08 02:07 |
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error--rosetta fragment‐based refinement protocol for refinement against EM density by gsuchunli » Thu, 2016-06-30 11:06 |
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3,158 |
by rmoretti Tue, 2016-07-12 08:18 |
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question about scoring silent output files and their contents by burkheadlab » Wed, 2011-07-27 16:28 |
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2,711 |
by rmoretti Mon, 2014-04-21 06:47 |
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Documentation missing in MultiGraft by aroop » Thu, 2012-03-15 07:39 |
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2,407 |
by aroop Mon, 2014-04-21 06:47 |
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RosettaRemodel by berk » Wed, 2013-07-10 11:21 |
2 |
2,134 |
by jadolfbr Mon, 2014-04-21 06:48 |
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RosettaCM: "Ligands must be added to all templates" by lanselibai » Tue, 2021-06-22 10:42 |
2 |
555 |
by lanselibai Wed, 2021-06-23 13:21 |
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relax from a silent input file by mintseris » Thu, 2010-04-29 19:54 |
2 |
2,447 |
by mintseris Mon, 2014-04-21 06:47 |
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double mutations scan by Lindsay » Fri, 2012-04-27 12:51 |
2 |
2,411 |
by Lindsay Mon, 2014-04-21 06:47 |
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Using a broker file with relax by Al52 » Mon, 2015-11-30 20:24 |
2 |
1,948 |
by Al52 Tue, 2015-12-01 18:22 |
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RNA update library by Anne Klein » Mon, 2022-05-16 16:04 |
2 |
162 |
by Anne Klein Tue, 2022-05-24 21:38 |
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cluster input_score_filter by lj269 » Thu, 2011-09-01 15:29 |
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2,389 |
by attesor Fri, 2014-10-31 04:23 |
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Does RNA parses checkpoint matrix as well as protein by qlj » Wed, 2014-03-05 06:03 |
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2,166 |
by qlj Thu, 2014-03-06 22:20 |
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metal_ions formal charge question by lah435 » Tue, 2015-02-03 09:35 |
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2,342 |
by lah435 Thu, 2015-02-12 09:16 |
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Problems in Loop Modeling by jklett » Mon, 2009-10-19 07:26 |
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2,597 |
by jklett Mon, 2014-04-21 06:47 |
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Can I use the relax mode application for removing clashes in a membrane protein homology model? by doranhen » Thu, 2012-12-20 05:45 |
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2,346 |
by doranhen Mon, 2014-04-21 06:47 |
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force hydrogen rebuild on input by jtmacd » Mon, 2013-11-18 08:28 |
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2,349 |
by jtmacd Mon, 2014-04-21 06:48 |
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Docking failure by khanhbinh » Sun, 2012-09-23 22:19 |
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2,406 |
by khanhbinh Mon, 2014-04-21 06:47 |
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Multi-chain Modelling by Sandy » Sun, 2015-08-09 14:41 |
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3,486 |
by rmoretti Tue, 2015-09-08 10:18 |
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Why I have the different result with the same initial condition? by mikelin » Sat, 2011-06-04 11:35 |
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3,412 |
by JeffreyGray Mon, 2014-04-21 06:47 |
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How to generate score file for loop refinement or modelling? by zhisheng » Fri, 2011-12-09 05:15 |
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2,697 |
by zhisheng Mon, 2014-04-21 06:47 |
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hydroxyproline patching problem by aaj » Mon, 2016-02-22 07:33 |
2 |
2,254 |
by aaj Mon, 2016-02-29 04:45 |
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Intermediate file insertion by exchhattu » Wed, 2009-09-02 18:44 |
2 |
2,058 |
by exchhattu Mon, 2014-04-21 06:47 |
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abinitio demo is not progressing - new install by jtpi6174 » Thu, 2022-03-24 03:49 |
2 |
215 |
by jtpi6174 Thu, 2022-03-24 09:43 |
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Where to find old version of Rosetta with git version number by mao_x » Wed, 2019-08-07 01:22 |
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1,563 |
by mao_x Thu, 2019-08-08 01:37 |
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analyzing the protein protein docking without native structure by rohi » Sun, 2020-10-11 20:42 |
2 |
997 |
by rohi Tue, 2020-10-13 09:15 |
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Noncanonical amino acid HIP by Victor » Fri, 2014-01-31 07:45 |
2 |
3,360 |
by Victor Fri, 2014-01-31 10:41 |
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backbone-independent density by SergeyP » Sun, 2016-03-20 04:57 |
2 |
1,957 |
by SergeyP Thu, 2016-05-05 02:07 |
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ref2015: approx. kcal/mol or actually kJ/mol? by matteoferla » Thu, 2021-10-07 04:04 |
2 |
561 |
by matteoferla Thu, 2021-10-07 09:31 |
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redesign a enzyme by fixing the active site by Lindsay » Wed, 2012-03-07 08:23 |
2 |
2,489 |
by Lindsay Mon, 2014-04-21 06:47 |
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Rosetta3.5 src/core/pack/dunbrack/RotamerLibrary.cc permission problem by ytao » Fri, 2013-06-28 12:13 |
2 |
2,780 |
by ytao Mon, 2014-04-21 06:48 |
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a question about protein-ligand docking in generating 1SW2 conformers by Ryhon Wang » Wed, 2014-05-28 22:27 |
2 |
2,798 |
by rmoretti Tue, 2014-06-03 11:45 |
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AtomPair and SPLINE by attesor » Sat, 2015-06-20 11:42 |
2 |
3,040 |
by attesor Thu, 2015-10-22 03:42 |
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Histidine phosphorylation by a patch by felipet » Sat, 2016-07-09 06:51 |
2 |
2,273 |
by felipet Sat, 2016-07-09 09:50 |
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Why I_sc of Rosetta 2016.02 and 2018.21 are so different? by eminegenetics » Mon, 2018-07-16 12:51 |
2 |
1,701 |
by eminegenetics Wed, 2018-07-18 13:48 |
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Negative design: Can a filter call a mover in rosetta scripts? by jgans » Sat, 2012-09-08 21:28 |
2 |
2,922 |
by rmoretti Mon, 2014-04-21 06:47 |
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restricting space in a design by ast » Tue, 2012-01-17 06:31 |
2 |
2,138 |
by rmoretti Mon, 2014-04-21 06:47 |
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Number of conformations needed by JadAbbass » Sun, 2014-02-16 13:21 |
2 |
2,085 |
by JadAbbass Tue, 2014-02-18 07:27 |
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Problem with ClashCountCalculator by masterofpuppets » Wed, 2015-01-07 04:47 |
2 |
2,127 |
by rmoretti Fri, 2015-01-09 10:59 |
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Error using ddg_monomer application (Assertion `pose.residue(resnum).name1() == wt` failed) by sgaray » Thu, 2021-06-24 14:47 |
2 |
803 |
by sgaray Fri, 2021-06-25 11:26 |
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