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Installing Rosetta Abinitio make_fragments.pl by ctaylor » Thu, 2009-09-17 09:20 |
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3,260 |
by ctaylor Mon, 2014-04-21 06:47 |
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Intel Compiler and OS X Intel by bene » Tue, 2009-10-20 10:20 |
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2,420 |
by smlewis Mon, 2014-04-21 06:47 |
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Intel MPI: early exit due to job process stopped. by jackzzs » Mon, 2023-05-15 02:57 |
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673 |
by jackzzs Mon, 2023-05-15 03:17 |
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Interface energy vs binding energy by Apiwat » Wed, 2014-02-05 00:47 |
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5,755 |
by Apiwat Sat, 2014-02-08 01:41 |
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Interface rmsd calculation Irms by mahajanr » Wed, 2010-07-07 18:24 |
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7,518 |
by mahajanr Mon, 2014-04-21 06:47 |
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Interface scores comparison by NingNing » Tue, 2022-08-09 17:36 |
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394 |
by NingNing Tue, 2022-08-09 17:36 |
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InterfaceAnalyzer atom subset by Parker.deWaal » Sun, 2016-03-13 13:41 |
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2,629 |
by rmoretti Mon, 2016-03-14 07:58 |
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InterfaceAnalyzer packstat score = 0.000 by vmc99 » Fri, 2018-11-16 11:30 |
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7,875 |
by SenyorDrew Wed, 2019-06-12 14:10 |
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InterfaceAnalyzer total score = 0.000 by vmc99 » Wed, 2019-06-12 14:06 |
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2,886 |
by jadolfbr Wed, 2019-06-12 20:17 |
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Intermediate file insertion by exchhattu » Wed, 2009-09-02 18:44 |
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2,579 |
by exchhattu Mon, 2014-04-21 06:47 |
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Internal error while running AbinitioRelax by Subhrodeep Saha » Sun, 2021-06-13 03:44 |
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1,109 |
by rmoretti Wed, 2021-06-23 02:17 |
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Interpreting decoy ensemble by lah435 » Wed, 2015-06-10 10:25 |
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1,887 |
by rmoretti Fri, 2015-07-03 13:51 |
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interpreting score values in silent output file after running abinitiorelax by burkheadlab » Wed, 2011-03-09 15:42 |
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3,374 |
by smlewis Mon, 2014-04-21 06:47 |
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intrensic disrodered proteins by ac.research » Thu, 2019-04-04 07:20 |
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1,445 |
by vmulligan Mon, 2019-04-08 14:49 |
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Introduction or tutorial about RosettaMatch by kwak » Thu, 2010-10-21 06:37 |
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6,149 |
by kwak Mon, 2014-04-21 06:47 |
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Is cis-Glycine okay? by matteoferla » Tue, 2019-11-19 07:26 |
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3,256 |
by matteoferla Wed, 2019-11-20 02:32 |
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Is CST_Design required for enzdes protocol? by dasdevashishdas » Mon, 2018-09-03 00:51 |
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2,204 |
by dasdevashishdas Thu, 2018-09-27 03:35 |
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Is it better to have smaller nstruct but many runs? by Loki01 » Mon, 2018-11-19 11:50 |
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2,372 |
by smlewis Mon, 2018-11-19 13:20 |
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Is it CS-HM Rosetta restraint derivation i.e cm_scripts in Rosetta 3.3 bundles? by nh_prt » Tue, 2013-03-26 12:22 |
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3,420 |
by smlewis Mon, 2014-04-21 06:47 |
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is it possbile to cluster pdb files? by albumns » Wed, 2010-10-06 02:38 |
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5,093 |
by smlewis Mon, 2014-04-21 06:47 |
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is it possible to ab initio only a part of a protein? by albumns » Sun, 2011-02-13 08:10 |
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4,660 |
by albumns Mon, 2014-04-21 06:47 |
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Is it possible to do Abinitio folding from a linear structure.? by monos_morpheus » Sat, 2011-04-16 09:13 |
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9,064 |
by monos_morpheus Mon, 2014-04-21 06:47 |
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Is it possible to do alanine scanning in Rosetta 3.2.1.? by monos_morpheus » Tue, 2011-04-12 02:36 |
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20,789 |
by smlewis Mon, 2014-04-21 06:47 |
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is it possible to generate models without hydrogen? by albumns » Fri, 2012-03-02 12:24 |
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7,926 |
by albumns Mon, 2014-04-21 06:47 |
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Is it possible to use two broker files by kalabharath » Wed, 2011-06-08 01:01 |
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2,326 |
by smlewis Mon, 2014-04-21 06:47 |
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Is the Fold&Dock protocol availabe in Rosetta3.1 by justin » Mon, 2011-01-17 02:41 |
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2,388 |
by smlewis Mon, 2014-04-21 06:47 |
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Is the packer aware of non canonical amino acids? by krdav » Tue, 2016-08-16 08:16 |
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6,153 |
by krdav Wed, 2016-08-17 12:57 |
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is the RosettaNMR protocol available in Rosetta 3.x? by murgantia » Wed, 2011-01-26 00:39 |
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2,086 |
by smlewis Mon, 2014-04-21 06:47 |
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is there a preferred way to enforce an hydrogen bond ? by logandonaldson » Wed, 2013-03-20 13:14 |
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2,702 |
by rmoretti Mon, 2014-04-21 06:47 |
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Is there a way to calculate chi1 and chi1+chi differences between two structures? by sn » Thu, 2017-04-20 21:46 |
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1,979 |
by rmoretti Fri, 2017-04-21 07:52 |
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Is there any significant improvement of model generation in rosetta3.4 comparing to rosetta3.3? by jiongzhang » Fri, 2012-04-20 13:35 |
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2,783 |
by rmoretti Mon, 2014-04-21 06:47 |
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IS there any source code about protein structure prediction with only sequences information? by ylwang » Mon, 2019-07-08 02:36 |
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1,454 |
by rmoretti Mon, 2019-07-08 08:05 |
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Is there other online server for generate fragment? by ylwang » Wed, 2020-04-01 01:39 |
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1,325 |
by rmoretti Wed, 2020-04-01 10:10 |
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Issue with Loop Analyzer Mover ouput by abhi_pe_acharya » Mon, 2018-04-30 09:55 |
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1,918 |
by abhi_pe_acharya Mon, 2018-04-30 22:54 |
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Issues running the Matcher in 3.4 and 3.5 by Jhreed » Tue, 2015-05-26 11:38 |
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2,037 |
by rmoretti Wed, 2015-06-17 12:43 |
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Issues with angle Constraints during Docking by LeonhardJS » Thu, 2021-01-28 04:40 |
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1,545 |
by LeonhardJS Fri, 2021-01-29 01:12 |
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Issues with residues and structure changing with FlexPepDock; is this normal? by rnelson » Tue, 2017-08-08 10:06 |
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1,692 |
by Ora Schueler-Furman Sun, 2017-08-20 00:54 |
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Iterative local rebuilding vs automated structure refinement by ahmadkhalifa » Fri, 2018-09-14 07:44 |
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3,311 |
by rmoretti Wed, 2018-11-21 14:11 |
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I_sc by Soler » Sat, 2022-02-12 00:16 |
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911 |
by rmoretti Fri, 2022-02-18 11:14 |
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jd2 time out error by ytao » Mon, 2013-03-04 20:47 |
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2,598 |
by ytao Mon, 2014-04-21 06:47 |
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JD3 w/ Silent file output crashing - Option filename not found by aduffy33 » Mon, 2023-10-30 13:40 |
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by aduffy33 Mon, 2023-10-30 15:35 |
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Job Distribution Error by ac.research » Mon, 2020-02-10 08:22 |
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1,843 |
by ac.research Fri, 2020-02-14 23:33 |
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Jump::random_trans strange behavior by SergeyP » Tue, 2015-11-03 07:56 |
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2,482 |
by SergeyP Sat, 2015-12-19 05:20 |
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keep ATP in the kinase-peptide structure while docking by ziqi1234 » Fri, 2017-11-10 04:04 |
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1,055 |
by ziqi1234 Fri, 2017-11-10 04:04 |
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keep crystal structure hydrogens by gw » Wed, 2011-07-20 03:54 |
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3,133 |
by gw Mon, 2014-04-21 06:47 |
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kinematic loop modeling/sequence design keeps crashing with segmentation fault by banshee » Thu, 2013-03-28 09:52 |
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8,005 |
by smlewis Mon, 2014-04-21 06:47 |
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Knowledge check on steric effects by pachecoj » Thu, 2014-10-16 09:13 |
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2,276 |
by rmoretti Thu, 2014-10-16 10:33 |
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known disulfides in Remodel sequence by matteoferla » Mon, 2018-09-10 06:43 |
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1,684 |
by matteoferla Thu, 2018-09-13 06:21 |
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latest version of rosetta--unable to build models by pramod » Mon, 2014-11-03 11:40 |
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10,238 |
by jadolfbr Wed, 2014-11-26 11:40 |
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lDDT: local Distance Difference Test implemented? by ipetrik_ambry » Wed, 2017-12-06 13:11 |
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1,235 |
by ipetrik_ambry Wed, 2017-12-06 13:11 |
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LHOC script problem in Rosetta Antibody by ziheng@mit.edu » Thu, 2019-04-25 14:19 |
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1,956 |
by Brian Wiley Sat, 2023-02-04 23:26 |
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Library of unnatural amino acid parameters by saxen » Mon, 2017-04-17 11:08 |
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3,569 |
by smlewis Tue, 2017-04-18 08:33 |
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Ligand being read as part of protein structure by MarkusAurelius » Thu, 2021-04-01 11:00 |
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1,458 |
by MarkusAurelius Fri, 2021-04-02 11:44 |
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Ligand conformations file in docking by rosa » Fri, 2013-07-12 09:21 |
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5,162 |
by rosa Mon, 2014-04-21 06:48 |
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ligand dock residue selection by Silice » Wed, 2009-08-12 08:57 |
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2,719 |
by frichter Mon, 2014-04-21 06:47 |
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ligand docking by hong wei » Thu, 2021-11-18 05:01 |
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1,164 |
by hong wei Thu, 2021-11-25 02:46 |
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ligand docking error by YuFei » Wed, 2020-04-22 17:27 |
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862 |
by YuFei Wed, 2020-04-22 17:27 |
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Ligand Docking Positive Control: wt ligand by Basantab » Thu, 2011-10-27 13:36 |
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13,331 |
by Basantab Mon, 2014-04-21 06:47 |
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Ligand Docking with Orphan GPCR by marsaa » Thu, 2016-10-13 07:45 |
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2,242 |
by rmoretti Fri, 2016-10-14 16:43 |
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ligand docking with rosetta_scripts.linuxgccrelease by xpzhang » Thu, 2015-02-26 10:57 |
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4,033 |
by rmoretti Mon, 2015-03-30 16:58 |
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Ligand docking: how to generate the crystal_complex.pdb with hydrogens added by nhinguyen26 » Wed, 2020-06-17 15:03 |
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1,261 |
by matteoferla Sat, 2020-06-20 03:56 |
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ligand flexibility by dave » Thu, 2015-02-12 08:48 |
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2,090 |
by rmoretti Wed, 2015-02-18 09:17 |
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Ligand question - aromatic bonds not being enforced? by Rick_Baker » Wed, 2019-09-11 09:08 |
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1,399 |
by Rick_Baker Wed, 2019-09-11 15:35 |
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Linker problems when building mini by assaff » Mon, 2009-10-12 01:07 |
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5,144 |
by smlewis Mon, 2014-04-21 06:47 |
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local refinement by mahajanr » Mon, 2010-07-19 15:04 |
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2,088 |
by smlewis Mon, 2014-04-21 06:47 |
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location of define_interface.py by rohi » Mon, 2020-10-26 19:42 |
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1,589 |
by rmoretti Tue, 2023-05-09 15:32 |
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log files by shadrinams » Fri, 2018-01-26 07:29 |
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6,429 |
by shadrinams Mon, 2018-02-12 11:47 |
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Looking for a pdb.... by MarkW » Mon, 2014-10-13 15:45 |
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7,908 |
by rmoretti Mon, 2014-11-03 16:30 |
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Looking for collaboration. by ac.research » Mon, 2017-03-06 04:54 |
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1,743 |
by rmoretti Mon, 2017-03-06 08:37 |
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loop design by varma » Sun, 2012-11-04 21:25 |
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3,798 |
by varma Mon, 2014-04-21 06:47 |
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Loop extensions at the end of chains by japgar » Mon, 2010-07-26 12:35 |
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4,056 |
by japgar Mon, 2014-04-21 06:47 |
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loop file by banshee » Tue, 2013-06-04 13:26 |
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2,628 |
by banshee Mon, 2014-04-21 06:48 |
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Loop Insertion/Extension using rosetta suite by bharat_46010 » Mon, 2011-02-28 04:45 |
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2,017 |
by smlewis Mon, 2014-04-21 06:47 |
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loop model error by albumns » Sun, 2011-04-03 00:26 |
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18,942 |
by rmoretti Fri, 2015-12-18 14:26 |
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loop modeling by bharat_46010 » Thu, 2015-08-06 01:34 |
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1,886 |
by rmoretti Thu, 2015-08-06 09:28 |
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loop modeling by MRH » Thu, 2013-08-22 23:19 |
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3,982 |
by MRH Mon, 2014-04-21 06:48 |
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loop modeling by isengupta13 » Wed, 2011-06-01 15:00 |
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3,750 |
by smlewis Mon, 2014-04-21 06:47 |
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Loop Modeling by ctaylor » Fri, 2009-12-18 11:42 |
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3,256 |
by ctaylor Mon, 2014-04-21 06:47 |
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Loop modeling by Robertofg » Tue, 2022-11-22 00:34 |
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442 |
by Robertofg Tue, 2022-11-22 00:34 |
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Loop Modeling Deletes Residues by Julix » Wed, 2012-09-05 10:14 |
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6,555 |
by smlewis Mon, 2014-04-21 06:47 |
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Loop modeling FLAGS by jklett » Fri, 2009-12-04 02:45 |
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3,368 |
by jklett Mon, 2014-04-21 06:47 |
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Loop Modeling with fixed backbone by bharat_46010 » Mon, 2011-12-19 05:20 |
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8,272 |
by bharat_46010 Mon, 2014-04-21 06:47 |
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Loop modeling with ligand in the receptor by cno » Mon, 2010-12-13 14:07 |
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6,169 |
by smlewis Mon, 2014-04-21 06:47 |
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loop modelling error on Rosetta3.2 or Rosetta3.3 by exchhattu » Thu, 2011-09-29 03:58 |
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4,910 |
by rpache Mon, 2014-04-21 06:47 |
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loop modelling on complex structure by Tianyang89 » Fri, 2020-09-18 07:24 |
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1,229 |
by amelie.stein Mon, 2020-09-28 10:41 |
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Loop modelling, by berk » Sat, 2013-06-08 08:29 |
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2,706 |
by berk Mon, 2014-04-21 06:48 |
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loop modelling/Rosetta 3.4, 3.5 by berk » Tue, 2013-07-02 08:38 |
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5,616 |
by MRH Mon, 2014-04-21 06:48 |
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Loop Modelling: ERROR: switch_to_residue_type_set fails by smiruthi » Wed, 2012-07-18 14:48 |
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3,448 |
by smlewis Mon, 2014-04-21 06:47 |
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loop remodelling with a fixed bound DNA by jtmacd » Thu, 2010-02-25 03:23 |
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6,193 |
by jtmacd Mon, 2014-04-21 06:47 |
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low resolution blind protein-protein docking with a ligand by einew » Sun, 2011-03-20 13:59 |
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5,705 |
by einew Mon, 2014-04-21 06:47 |
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lysine-aspartate isopeptide bond by matteoferla » Tue, 2016-11-01 10:54 |
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11,834 |
by ablakely7 Wed, 2019-09-11 15:33 |
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Make fragments by jeanramos » Mon, 2020-07-13 00:56 |
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761 |
by jeanramos Mon, 2020-07-13 00:56 |
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make fragments for a loop by jarod » Mon, 2010-03-15 07:31 |
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2,702 |
by jarod Mon, 2014-04-21 06:47 |
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MakeRotLib by yinasun » Fri, 2019-07-26 02:18 |
2 |
1,984 |
by jalan Sun, 2020-04-12 08:01 |
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MakeRotLib by yinasun » Fri, 2019-07-26 02:17 |
0 |
897 |
by yinasun Fri, 2019-07-26 02:17 |
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MakeRotLib by yinasun » Sun, 2019-07-28 20:08 |
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1,440 |
by rmoretti Mon, 2019-08-26 15:00 |
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MakeRotLib by yinasun » Fri, 2019-07-26 02:20 |
1 |
1,479 |
by rmoretti Mon, 2019-08-26 15:01 |
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make_fragment.pl Error! by Apiwat » Sat, 2014-02-15 13:35 |
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13,556 |
by Apiwat Tue, 2014-03-11 09:42 |
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make_fragments by sumukh21 » Wed, 2011-02-23 09:29 |
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3,625 |
by sumukh21 Mon, 2014-04-21 06:47 |
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make_fragments by ctaylor » Mon, 2009-09-21 12:41 |
2 |
2,777 |
by ctaylor Mon, 2014-04-21 06:47 |
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