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AbInitioRelax.mpi Hangs - Waiting for Job Request by nleroy » Thu, 2019-10-31 07:30 |
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1,912 |
by nleroy Fri, 2019-11-08 12:44 |
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Which rosetta for antibody modelling? by oppopomoz » Wed, 2013-04-24 09:10 |
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2,837 |
by jadolfbr Mon, 2014-04-21 06:47 |
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Question about CartesianMD by orionshih » Sun, 2018-04-29 21:07 |
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1,883 |
by orionshih Tue, 2018-05-01 21:16 |
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Why does the sum of the per-residue total energy not match the whole score? by matteoferla » Fri, 2021-07-09 08:36 |
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1,290 |
by matteoferla Mon, 2021-07-12 02:23 |
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Minimizing across jumps by SenyorDrew » Thu, 2017-07-06 06:26 |
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2,321 |
by SenyorDrew Thu, 2017-07-06 07:48 |
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multi state protein design by rohi » Fri, 2020-09-04 08:14 |
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1,661 |
by rmoretti Tue, 2021-02-09 13:45 |
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total_score changes when decomposing bb hbonds ref2015 by Liviu Copoiu » Mon, 2022-10-31 15:40 |
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498 |
by Liviu Copoiu Mon, 2022-10-31 16:03 |
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filter score by I_sc and keep top 1000 by aaj » Tue, 2016-01-19 07:13 |
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2,680 |
by aaj Mon, 2016-02-22 07:43 |
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Different weights in the constraints for each stage of AbinitioRelax by allan.ferrari » Sun, 2017-01-15 04:35 |
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2,477 |
by smlewis Sun, 2017-01-15 18:10 |
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Rescoring regions of structures by erin_cutts » Mon, 2013-07-22 04:43 |
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2,867 |
by erin_cutts Mon, 2014-04-21 06:48 |
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recommended function type for cross links data by meravb » Sun, 2018-08-05 06:57 |
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1,778 |
by rmoretti Mon, 2018-08-20 11:51 |
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Performace Benchmarking by Tushar Kush » Wed, 2019-12-04 02:50 |
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2,163 |
by smlewis Wed, 2019-12-04 13:07 |
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Patches for post-translational modifications by ltrabuco » Tue, 2011-02-22 01:00 |
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3,857 |
by ltrabuco Mon, 2014-04-21 06:47 |
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Is the Fold&Dock protocol availabe in Rosetta3.1 by justin » Mon, 2011-01-17 02:41 |
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2,326 |
by smlewis Mon, 2014-04-21 06:47 |
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loop file by banshee » Tue, 2013-06-04 13:26 |
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2,572 |
by banshee Mon, 2014-04-21 06:48 |
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Score Differences between Ab Initio Scoring and Rescore by mmarlett » Wed, 2016-06-15 09:14 |
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2,436 |
by mmarlett Thu, 2016-06-16 07:06 |
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Design with non-canonical amino acids (NCAA) by yinasun » Mon, 2019-08-05 00:34 |
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2,148 |
by matteoferla Thu, 2019-08-22 05:39 |
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jd2 time out error by ytao » Mon, 2013-03-04 20:47 |
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2,519 |
by ytao Mon, 2014-04-21 06:47 |
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Is CST_Design required for enzdes protocol? by dasdevashishdas » Mon, 2018-09-03 00:51 |
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2,125 |
by dasdevashishdas Thu, 2018-09-27 03:35 |
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What is the best way to make a residue-specific SASA constraint? by jmaly » Thu, 2020-01-23 16:40 |
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2,032 |
by matteoferla Wed, 2020-01-29 12:18 |
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problem plotting results from docking_analyser with provided Rscript by madammolecular » Mon, 2021-02-01 14:44 |
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1,298 |
by amystevens Thu, 2021-09-30 14:18 |
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Weekly releases for commercial users? by rjacak » Tue, 2022-03-22 07:48 |
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842 |
by rjacak Thu, 2022-03-31 10:53 |
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input secondary structure prediction to AbinitioRelax by biofisikx » Mon, 2010-08-09 12:36 |
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2,459 |
by biofisikx Mon, 2014-04-21 06:47 |
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loop design by varma » Sun, 2012-11-04 21:25 |
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3,707 |
by varma Mon, 2014-04-21 06:47 |
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Jump::random_trans strange behavior by SergeyP » Tue, 2015-11-03 07:56 |
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2,405 |
by SergeyP Sat, 2015-12-19 05:20 |
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How to transform a pose from symmetric into non-symmetric? by msardejani » Tue, 2016-10-04 16:55 |
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2,368 |
by msardejani Wed, 2016-10-05 10:53 |
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the meaning of "maxsub" in score.fsc by exchhattu » Tue, 2009-11-10 04:37 |
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3,344 |
by smlewis Mon, 2014-04-21 06:47 |
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error when running beta_strand_homodimer_design by szypanther » Sun, 2014-05-25 20:22 |
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3,349 |
by szypanther Mon, 2014-05-26 22:03 |
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Ineffective Constraints by Sandy » Tue, 2017-09-05 19:36 |
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2,125 |
by CameronJA Wed, 2022-01-19 20:50 |
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Homology modeling by mchldln » Mon, 2009-08-17 13:04 |
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3,469 |
by smlewis Mon, 2014-04-21 06:47 |
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generate full atom coordinates with abinitio rosetta structure prediction by anusmita_sahoo » Tue, 2010-03-30 00:11 |
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2,980 |
by Trentage Mon, 2014-04-21 06:47 |
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I can't find the workflow about modeling disordered regsion using rosetta? by lihowe » Thu, 2011-12-29 03:45 |
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2,928 |
by wangyr Mon, 2014-04-21 06:47 |
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Does the energy score output by fixbb design have unit? by Lindsay » Mon, 2012-06-18 15:03 |
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2,925 |
by Lindsay Mon, 2014-04-21 06:47 |
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Configuration of Robetta fragment libraries by Run » Fri, 2014-01-24 23:03 |
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2,822 |
by Run Mon, 2014-04-21 06:48 |
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The -symmetry:perturb_rigid_body_dofs flag by doranhen » Sat, 2012-04-28 13:01 |
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2,610 |
by doranhen Mon, 2014-04-21 06:47 |
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Write PDB with multiple side-chain configurations by pachecoj » Tue, 2014-09-30 21:42 |
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2,800 |
by pachecoj Thu, 2014-10-09 18:15 |
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Expanding the silent file by jharamesh » Fri, 2018-01-12 09:15 |
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1,853 |
by rmoretti Mon, 2018-01-15 14:35 |
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Undocumented changes in BackrubDD by abhi_pe_acharya » Mon, 2018-07-16 00:24 |
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1,827 |
by abhi_pe_acharya Sun, 2018-08-05 22:03 |
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protein surface design by tatsiana.bylund » Sun, 2019-09-15 03:44 |
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1,717 |
by dfcoelho Tue, 2019-11-19 10:16 |
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harmonic_Calphas in RosettaLigand flags.txt by cpkuntz » Wed, 2010-07-14 08:57 |
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2,394 |
by smlewis Mon, 2014-04-21 06:47 |
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fixbb design use by Lindsay » Fri, 2012-03-23 09:05 |
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2,677 |
by Lindsay Mon, 2014-04-21 06:47 |
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Generate structural fragments by kingljy » Tue, 2011-05-10 20:18 |
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4,941 |
by pepfolder Mon, 2014-04-21 06:47 |
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How to specify residue numbers in a resfile for a batch of pdbs, while some of them have missing residue numbers? by johnnytam100 » Wed, 2019-05-08 02:30 |
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2,151 |
by johnnytam100 Wed, 2019-05-15 18:45 |
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homo-oligomeric proteins.............folddock+symmetry+abinito by anusmita_sahoo » Thu, 2010-04-29 02:59 |
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3,443 |
by biofisikx Mon, 2014-04-21 06:47 |
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Loop Modelling: ERROR: switch_to_residue_type_set fails by smiruthi » Wed, 2012-07-18 14:48 |
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3,392 |
by smlewis Mon, 2014-04-21 06:47 |
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symmetric docking application rosetta3.2: the docking_local_refine flag by doranhen » Sun, 2012-05-06 02:20 |
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3,006 |
by doranhen Mon, 2014-04-21 06:47 |
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sign of ddG of mutation by Lindsay » Wed, 2013-11-27 00:25 |
2 |
4,284 |
by Lindsay Mon, 2014-04-21 06:48 |
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Calculating binding affinity by phanvy » Wed, 2014-10-15 23:35 |
2 |
4,333 |
by phanvy Thu, 2014-10-16 18:54 |
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Repeating sequence in Rosetta de novo protein folding by orionshih » Wed, 2018-02-07 20:52 |
2 |
1,903 |
by sheehajh Thu, 2018-02-08 21:18 |
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perturb_temp flag by Loki01 » Tue, 2018-11-27 05:06 |
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1,784 |
by rmoretti Wed, 2019-04-03 09:58 |
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Ligand being read as part of protein structure by MarkusAurelius » Thu, 2021-04-01 11:00 |
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1,375 |
by MarkusAurelius Fri, 2021-04-02 11:44 |
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genkic mover produced an unwanted HN - CA bond by cttm4a1 » Mon, 2022-06-20 14:25 |
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652 |
by cttm4a1 Mon, 2022-06-20 16:58 |
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Is it possible to use two broker files by kalabharath » Wed, 2011-06-08 01:01 |
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2,279 |
by smlewis Mon, 2014-04-21 06:47 |
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No output with docking full protocol by JulienO » Mon, 2016-05-30 02:08 |
1 |
1,736 |
by rmoretti Tue, 2016-07-12 08:40 |
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SNUGDOCK by adva » Sun, 2017-07-16 00:49 |
1 |
1,460 |
by jeliazkov Tue, 2017-07-18 09:51 |
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Predicting conformations of mutated residues by Delfosse57 » Tue, 2023-08-22 12:26 |
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94 |
by rmoretti Wed, 2023-08-23 08:26 |
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symmetric Docking- TRIMER in Rosetta 3.4 ? by sdg_lab » Thu, 2012-04-12 04:22 |
1 |
3,404 |
by rmoretti Mon, 2014-04-21 06:47 |
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opt-E Reference energies by vijayan » Wed, 2013-08-07 07:35 |
1 |
2,022 |
by rmoretti Mon, 2014-04-21 06:48 |
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Plexpepdock with Zn by phanvy » Sun, 2014-06-22 22:40 |
1 |
1,903 |
by nawsad Wed, 2014-06-25 13:26 |
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How to convert fragments to PDB format? by JadAbbass » Wed, 2015-08-19 04:05 |
1 |
2,036 |
by rmoretti Wed, 2015-09-02 12:48 |
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HBNetStapleInterface by sdh_h » Wed, 2016-08-24 03:30 |
1 |
1,581 |
by smlewis Wed, 2016-08-24 07:23 |
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What is the best protocol to predict the missing residues in X-ray crystallisation? by lanselibai » Sun, 2019-12-29 04:44 |
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1,184 |
by matteoferla Wed, 2020-01-01 04:30 |
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Help - Protein-Protein interface design by Dinesh Kumar » Thu, 2021-01-28 00:47 |
1 |
934 |
by rmoretti Tue, 2021-02-09 10:29 |
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mcm for Docking in Rosetta3.1 by dyq » Tue, 2010-01-12 13:44 |
1 |
2,149 |
by smlewis Mon, 2014-04-21 06:47 |
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Multiple jobs for homology modeling by justin » Fri, 2011-06-24 08:03 |
1 |
2,956 |
by smlewis Mon, 2014-04-21 06:47 |
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Moving Rosetta to C++11 standard by smlewis » Wed, 2012-02-29 12:30 |
1 |
15,367 |
by rmoretti Sat, 2015-09-05 12:10 |
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Amino acid post-translational modifications by aelatico » Tue, 2018-06-19 03:29 |
1 |
1,773 |
by smlewis Tue, 2018-06-19 10:31 |
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Protein-Protein Docking by hwillis » Fri, 2009-08-07 01:31 |
1 |
2,450 |
by smlewis Mon, 2014-04-21 06:47 |
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How to set the cyana format of distance restraint in rosetta? by zhisheng » Mon, 2011-04-25 02:21 |
1 |
2,969 |
by smlewis Mon, 2014-04-21 06:47 |
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Error: Some problem with atom_id_mask in defining atom_id_map by galvaner » Tue, 2016-03-01 13:23 |
1 |
1,631 |
by rmoretti Thu, 2016-04-28 15:57 |
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Multi-state design with the error "unable to locate database file" by yifeili1983 » Sun, 2019-03-31 18:30 |
1 |
1,680 |
by rmoretti Wed, 2019-04-03 09:31 |
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str::out_of_range with mpiexec and relax by pedro.guillem » Fri, 2020-06-19 10:39 |
1 |
1,590 |
by pedro.guillem Wed, 2020-06-24 04:49 |
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parameter file of GLU protonated (GLU_P1.params) by rohi » Sat, 2021-06-05 20:44 |
1 |
893 |
by nannemdp Sun, 2021-06-06 09:26 |
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Cluster gdtmm vs. rmsd by brspurri » Thu, 2012-04-19 08:20 |
1 |
3,377 |
by rmoretti Mon, 2014-04-21 06:47 |
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symmetric design without symmetrizing the structure by sdh_h » Tue, 2016-09-13 05:49 |
1 |
1,859 |
by rmoretti Tue, 2016-09-13 07:41 |
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Errors Rosetta symm refine by ms4392 » Fri, 2016-10-21 13:56 |
1 |
1,861 |
by rmoretti Mon, 2016-11-14 14:26 |
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RifGen error on rosetta, "assertion failed", please help! by guowuchen » Thu, 2022-05-05 06:20 |
1 |
864 |
by sia Tue, 2022-07-05 05:47 |
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rosie github log in by YUANXU » Tue, 2023-04-25 20:13 |
1 |
217 |
by Sergey Thu, 2023-04-27 12:03 |
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Cterm_amidation by G Mustafa » Wed, 2021-11-03 08:52 |
1 |
849 |
by gezmi Sat, 2021-11-06 15:26 |
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what kind of focefield does Rosetta based on? by albumns » Tue, 2010-07-06 11:08 |
1 |
2,014 |
by smlewis Mon, 2014-04-21 06:47 |
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How to make Rosetta's sampling more aggresive ? by jiongzhang » Mon, 2012-03-12 11:04 |
1 |
2,107 |
by rmoretti Mon, 2014-04-21 06:47 |
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the output of ligand docking by phanvy » Fri, 2015-07-03 01:27 |
1 |
1,925 |
by rmoretti Fri, 2015-07-03 13:14 |
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problems in building rosetta3.1 (solved) by zpliu09 » Wed, 2010-03-31 02:03 |
1 |
1,859 |
by smlewis Mon, 2014-04-21 06:47 |
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prepack vs. relax with bb_cst by Anonymous » Mon, 2012-06-25 06:50 |
1 |
2,430 |
by smlewis Mon, 2014-04-21 06:47 |
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Extremely low interface scores with "local refinement" by eminegenetics » Wed, 2017-03-29 12:24 |
1 |
1,848 |
by rmoretti Wed, 2017-03-29 12:37 |
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Rosetta Antibody cuts off light chain? by ziheng@mit.edu » Thu, 2019-05-02 15:17 |
1 |
1,328 |
by jeliazkov Fri, 2019-05-03 07:00 |
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abintio clustering - funnel plot by vamsi » Fri, 2011-03-25 09:18 |
1 |
2,502 |
by smlewis Mon, 2014-04-21 06:47 |
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Memory leak? Memory consumption rises quickly when using JD2 app(s) by yuvals » Mon, 2014-10-06 11:35 |
1 |
2,054 |
by yuvals Mon, 2014-10-06 15:02 |
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Ab Initio large threshold for clustering by Swillard » Mon, 2018-11-12 14:14 |
1 |
1,478 |
by rmoretti Wed, 2018-11-21 14:01 |
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mol2genparams.py script dependencies by dhirajks » Wed, 2022-06-08 16:46 |
1 |
523 |
by matteoferla Thu, 2022-06-09 14:41 |
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Question about FlexPepDock score by aelatico » Thu, 2018-07-19 20:39 |
1 |
1,533 |
by rmoretti Wed, 2018-08-01 16:04 |
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error running "helix_preassemble_setup.py" by zahra_AZ » Tue, 2020-11-03 01:54 |
1 |
1,256 |
by rmoretti Tue, 2021-02-09 12:19 |
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Calculating shape complementarity of ligand and protein by varunmc99 » Tue, 2023-01-17 11:29 |
1 |
397 |
by rmoretti Mon, 2023-02-06 14:42 |
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Domain Insertion equivalent in Rosetta 3.2 by SenyorDrew » Wed, 2011-02-09 09:47 |
1 |
1,985 |
by smlewis Mon, 2014-04-21 06:47 |
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PDB output sum by enoee » Fri, 2010-07-16 12:29 |
1 |
1,997 |
by smlewis Mon, 2014-04-21 06:47 |
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header pathways not accessable: No such file or directory by rlwoltz » Tue, 2012-09-18 17:44 |
1 |
2,208 |
by smlewis Mon, 2014-04-21 06:47 |
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Installing rosetta 3.0 by dalemu » Thu, 2009-09-24 13:28 |
1 |
2,595 |
by smlewis Mon, 2014-04-21 06:47 |
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3D Structure Prediction by anirbanzz » Sat, 2010-04-17 02:47 |
1 |
2,517 |
by smlewis Mon, 2014-04-21 06:47 |
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File specification of binary part of silent file (especially PDB section) by m.ebert » Wed, 2019-05-29 01:52 |
1 |
1,256 |
by smlewis Wed, 2019-05-29 13:21 |
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Residue outside res_map range by to-qinbin@163.com » Sat, 2022-09-10 01:56 |
1 |
721 |
by rmoretti Mon, 2022-09-12 07:01 |
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