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Rosetta 3 - General

Topic / Topic startersort descending Replies Views Last post
Normal topic loop remodelling with a fixed bound DNA
by jtmacd » Thu, 2010-02-25 03:23
8
6,639 by jtmacd
Mon, 2014-04-21 06:47
Normal topic low resolution blind protein-protein docking with a ligand
by einew » Sun, 2011-03-20 13:59
5
6,002 by einew
Mon, 2014-04-21 06:47
Normal topic lysine-aspartate isopeptide bond
by matteoferla » Tue, 2016-11-01 10:54
13
13,043 by ablakely7
Wed, 2019-09-11 15:33
Normal topic Make fragments
by jeanramos » Mon, 2020-07-13 00:56
0
848 by jeanramos
Mon, 2020-07-13 00:56
Normal topic make fragments for a loop
by jarod » Mon, 2010-03-15 07:31
2
2,866 by jarod
Mon, 2014-04-21 06:47
Normal topic MakeRotLib
by yinasun » Fri, 2019-07-26 02:18
2
2,217 by jalan
Sun, 2020-04-12 08:01
Normal topic MakeRotLib
by yinasun » Fri, 2019-07-26 02:17
0
1,004 by yinasun
Fri, 2019-07-26 02:17
Normal topic MakeRotLib
by yinasun » Sun, 2019-07-28 20:08
1
1,599 by rmoretti
Mon, 2019-08-26 15:00
Closed topic MakeRotLib
by yinasun » Fri, 2019-07-26 02:20
1
1,662 by rmoretti
Mon, 2019-08-26 15:01
Normal topic make_fragment.pl Error!
by Apiwat » Sat, 2014-02-15 13:35
12
14,545 by Apiwat
Tue, 2014-03-11 09:42
Normal topic make_fragments
by ctaylor » Mon, 2009-09-21 12:41
2
2,999 by ctaylor
Mon, 2014-04-21 06:47
Normal topic make_fragments
by sumukh21 » Wed, 2011-02-23 09:29
3
3,876 by sumukh21
Mon, 2014-04-21 06:47
Normal topic make_fragments.pl
by rlwoltz » Fri, 2019-02-01 10:31
0
1,639 by rlwoltz
Fri, 2019-02-01 10:31
Normal topic Make_fragments.pl database
by TiagoGomes » Tue, 2009-10-13 11:31
5
4,812 by matteoferla
Wed, 2021-09-29 01:58
Normal topic make_fragments.pl without sparks
by nannemdp » Mon, 2014-06-09 13:18
1
2,278 by rmoretti
Tue, 2014-06-10 11:34
Normal topic manually changing fixbb residue ref energies
by jtmacd » Wed, 2009-11-25 08:43
4
4,170 by jtmacd
Mon, 2014-04-21 06:47
Normal topic match_dspos1 and other matcher options
by petrikigor » Sat, 2012-10-20 09:22
5
5,661 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Maximum Number of Constraints
by jurkm » Fri, 2011-06-17 05:23
3
5,136 by jurkm
Mon, 2014-04-21 06:47
Normal topic maxsub calculation in scoring app
by abdullah » Thu, 2011-04-28 06:47
0
1,733 by abdullah
Mon, 2014-04-21 06:47
Normal topic max_nn
by anusmita_sahoo » Thu, 2010-03-11 02:21
1
2,054 by smlewis
Mon, 2014-04-21 06:47
Normal topic mcm for Docking in Rosetta3.1
by dyq » Tue, 2010-01-12 13:44
1
2,319 by smlewis
Mon, 2014-04-21 06:47
Normal topic Meaning of a couple terms?
by aloshbau » Sun, 2016-02-07 16:48
2
2,590 by aloshbau
Sun, 2016-02-14 20:14
Normal topic Meaning of Metalbinding_constraint
by Corvin » Wed, 2021-05-19 07:54
0
877 by Corvin
Wed, 2021-05-19 07:54
Normal topic meaning of the clustering the output files
by phanvy » Tue, 2014-06-24 07:11
1
2,047 by rmoretti
Tue, 2014-07-01 12:07
Normal topic membrane ab initio error after montecarlo
by adva » Mon, 2012-12-24 01:43
6
6,183 by tevang
Mon, 2014-04-21 06:47
Normal topic Membrane AbInitio
by coxford » Sat, 2012-12-22 05:06
0
2,594 by coxford
Mon, 2014-04-21 06:47
Hot topic membrane abinitio on heteromultimeric complexes
by omirus » Fri, 2013-04-26 14:48
19
17,569 by pledor
Mon, 2014-04-21 06:47
Normal topic Membrane folding - blastpgp error.
by arthuc01 » Sun, 2012-03-25 14:47
4
5,840 by arthuc01
Mon, 2014-04-21 06:47
Normal topic membrane modeling error!
by wtscrystal » Wed, 2009-12-09 21:28
3
5,317 by arthuc01
Mon, 2014-04-21 06:47
Normal topic membrane protein packing prediction
by djpittdj » Fri, 2012-01-13 08:55
4
4,258 by pardave
Mon, 2014-04-21 06:47
Normal topic Memory error - double free or corruption
by almeida85 » Thu, 2023-05-25 06:18
0
421 by almeida85
Thu, 2023-05-25 06:18
Normal topic memory issue rosetta3.4 scripts
by ast » Mon, 2013-01-28 06:25
8
9,988 by smlewis
Mon, 2014-04-21 06:47
Normal topic Memory leak when PDB preparation
by Jacky010 » Mon, 2019-05-06 01:28
6
4,403 by Jacky010
Tue, 2019-05-14 01:24
Normal topic Memory leak? Memory consumption rises quickly when using JD2 app(s)
by yuvals » Mon, 2014-10-06 11:35
1
2,245 by yuvals
Mon, 2014-10-06 15:02
Normal topic MET, MSE, and fMET Amino Acids
by ac.research » Sat, 2017-11-18 06:33
1
3,491 by smlewis
Sun, 2017-11-19 20:08
Normal topic metal_ions formal charge question
by lah435 » Tue, 2015-02-03 09:35
2
3,027 by lah435
Thu, 2015-02-12 09:16
Normal topic Method for adding residues into PDB's w/ RosettaScripts.
by Wexter300 » Wed, 2023-03-15 13:07
1
648 by rmoretti
Thu, 2023-03-16 11:46
Normal topic Method for WebServer Fragment Generation
by Jacob_Verburgt » Tue, 2020-06-02 07:29
2
2,062 by Jacob_Verburgt
Tue, 2020-06-02 10:26
Normal topic Method to keep ATP in the certain position in the prepack step
by ziqi1234 » Tue, 2017-11-21 05:55
0
1,174 by ziqi1234
Tue, 2017-11-21 05:55
Normal topic Methodology Feedback with As(III) and Pb(II) Binding
by rnogy » Mon, 2023-11-06 17:05
0
276 by rnogy
Mon, 2023-11-06 17:06
Normal topic Minimization Issue: Coarse Graining to All atom modeling
by abolia » Tue, 2015-04-28 10:52
5
5,584 by rmoretti
Tue, 2015-05-05 14:31
Normal topic Minimizing across jumps
by SenyorDrew » Thu, 2017-07-06 06:26
2
2,577 by SenyorDrew
Thu, 2017-07-06 07:48
Normal topic minimum number of nstruct to build at 65% homolgy
by MRH » Thu, 2013-08-22 07:29
2
3,080 by MRH
Mon, 2014-04-21 06:48
Normal topic minirosetta segmentation fault
by sabine » Wed, 2013-12-11 13:08
13
16,383 by rmoretti
Tue, 2014-11-11 13:56
Normal topic Misleading error message
by renedominik » Tue, 2019-03-12 01:19
1
2,078 by vmulligan
Tue, 2019-03-26 11:30
Normal topic missing amino acid
by berk » Fri, 2013-06-14 06:07
1
2,012 by smlewis
Mon, 2014-04-21 06:48
Normal topic Missing atoms, unable to fill in missing atoms
by kwu030 » Fri, 2023-05-05 12:58
12
4,350 by kwu030
Thu, 2023-05-18 08:31
Normal topic mitochondria protein modeling
by rlwoltz » Fri, 2012-10-26 14:32
6
6,961 by smlewis
Mon, 2014-04-21 06:47
Normal topic mode=release compile on a mac-pro , seg faults and bus errors
by dnasmith » Thu, 2010-09-09 16:56
2
2,570 by dnasmith
Mon, 2014-04-21 06:47
Normal topic Model Extraction
by mdweirna » Tue, 2010-04-13 15:28
1
2,035 by smlewis
Mon, 2014-04-21 06:47
Normal topic model protein at low pH
by ytao » Mon, 2012-11-05 07:52
1
2,956 by smlewis
Mon, 2014-04-21 06:47
Normal topic Modeling
by hwillis » Wed, 2009-08-12 11:07
1
2,184 by frichter
Mon, 2014-04-21 06:47
Normal topic Modeling circular permutation and domain insertion
by bharat_46010 » Sun, 2011-04-10 19:54
13
11,594 by bharat_46010
Mon, 2014-04-21 06:47
Normal topic modeling loops between domains
by dhorita » Thu, 2009-03-05 14:48
6
5,952 by jarod
Mon, 2014-04-21 06:47
Normal topic Modeling of a Multi-Domain Dimer
by jurkm » Mon, 2011-08-29 01:39
10
11,273 by jurkm
Mon, 2014-04-21 06:47
Normal topic Modeling only part of the protein structure using ROSETTA
by qiongwu » Fri, 2009-05-29 09:08
5
5,024 by smlewis
Mon, 2014-04-21 06:47
Hot topic Modeling phosphate ion binding site in protein.
by bharat_46010 » Tue, 2011-05-17 19:08
19
20,382 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Modeling protonated histidine
by SenyorDrew » Mon, 2016-07-18 07:34
3
4,337 by matteoferla
Sat, 2017-08-05 07:18
Normal topic modeling residues with covalent ligand attachments
by sid » Fri, 2011-04-15 09:16
5
7,926 by rmoretti
Fri, 2015-07-03 14:02
Normal topic Modeling transmembrane and intracellular domain
by Sunyp_IM » Sun, 2018-04-08 06:44
1
1,738 by jkleman
Sat, 2018-04-14 10:55
Normal topic Modelling a loopless structure
by jhbrown » Tue, 2011-11-22 11:39
2
3,024 by jhbrown
Mon, 2014-04-21 06:47
Normal topic Modelling Sheets
by monteirotorres » Thu, 2009-07-02 11:41
2
2,918 by monteirotorres
Mon, 2014-04-21 06:47
Normal topic Models which are not recorded (Abinitio protocol)
by allan.ferrari » Fri, 2015-08-28 13:39
3
3,609 by rmoretti
Thu, 2015-09-17 12:42
Normal topic mol2genparams.py script dependencies
by dhirajks » Wed, 2022-06-08 16:46
1
763 by matteoferla
Thu, 2022-06-09 14:41
Normal topic Molecular oxygen
by matteoferla » Sat, 2018-02-24 06:05
3
3,459 by matteoferla
Mon, 2018-02-26 02:05
Normal topic Molfile to Params File Issue
by jferrie » Mon, 2018-04-23 15:25
0
1,419 by jferrie
Mon, 2018-04-23 15:25
Normal topic MotifGraft error: "Residue connection id changed when creating a new residue at seqpos"
by dfcoelho » Mon, 2020-02-03 11:09
1
1,601 by dfcoelho
Tue, 2020-02-04 07:45
Normal topic MoveMap file for backrub
by jiyongpark.77 » Sat, 2009-07-18 03:53
1
2,471 by smlewis
Mon, 2014-04-21 06:47
Normal topic Moving Rosetta to C++11 standard
by smlewis » Wed, 2012-02-29 12:30
1
15,592 by rmoretti
Sat, 2015-09-05 12:10
Normal topic mpi + mp_mutate_relax
by decrSTL » Thu, 2020-01-16 10:47
1
1,568 by jkleman
Thu, 2020-01-16 11:05
Hot topic mpi / jd2 with AbinitioRelax and relax (3.2)
by smg3d » Wed, 2011-02-09 10:39
25
25,032 by Gaurav_kumar
Mon, 2014-04-21 06:47
Normal topic MPI nodes hanging and output log incomplete
by yuvals » Wed, 2014-06-18 05:40
1
5,615 by yuvals
Sat, 2014-06-21 02:17
Normal topic MPI optimization on TACC stampede2 HPC
by rlwoltz » Tue, 2021-03-16 18:07
2
2,088 by rlwoltz
Wed, 2021-03-24 22:36
Normal topic MPI stall
by jadolfbr » Thu, 2013-10-10 18:59
9
10,638 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic mpi_MSD for antibody design
by hanzhiz » Thu, 2021-12-16 09:32
0
711 by hanzhiz
Thu, 2021-12-16 09:32
Normal topic MSDMover error in RECON protocol
by yifeili1983 » Mon, 2019-04-01 00:44
2
2,025 by yifeili1983
Mon, 2019-04-15 22:34
Normal topic multi state protein design
by rohi » Fri, 2020-09-04 08:14
2
1,977 by rmoretti
Tue, 2021-02-09 13:45
Normal topic Multi-chain Modelling
by Sandy » Sun, 2015-08-09 14:41
2
4,428 by rmoretti
Tue, 2015-09-08 10:18
Normal topic Multi-metric enzyme docking with substrate
by Wang Zhe » Sat, 2021-11-20 04:41
1
1,117 by matteoferla
Mon, 2021-12-13 02:27
Normal topic Multi-state design with the error "unable to locate database file"
by yifeili1983 » Sun, 2019-03-31 18:30
1
3,448 by rmoretti
Wed, 2019-04-03 09:31
Normal topic Multigraft
by bo » Tue, 2013-12-24 18:06
2
3,249 by Sergey Menis
Mon, 2014-04-21 06:48
Normal topic multiple cst files
by logandonaldson » Wed, 2013-03-20 12:16
4
4,576 by logandonaldson
Mon, 2014-04-21 06:47
Normal topic Multiple jobs for homology modeling
by justin » Fri, 2011-06-24 08:03
1
3,141 by smlewis
Mon, 2014-04-21 06:47
Normal topic Multiple Relax runnings
by mb0261 » Sat, 2022-08-27 05:42
1
766 by rmoretti
Tue, 2022-09-06 08:22
Normal topic multiple symmetry definition files
by sdh_h » Wed, 2016-06-29 09:31
1
1,913 by rmoretti
Wed, 2016-06-29 10:20
Normal topic Multiprocessing and running jobs on server using slurm
by ahmadkhalifa » Mon, 2018-04-09 10:59
1
4,198 by rmoretti
Tue, 2018-04-10 16:00
Normal topic Multiprocessor Execution
by starone » Tue, 2016-04-19 20:06
3
4,464 by smlewis
Thu, 2016-04-21 16:00
Normal topic Mutate multidomain protein
by frankfurter1 » Wed, 2018-05-09 04:40
0
1,149 by frankfurter1
Wed, 2018-05-09 04:40
Normal topic mutate residue at termini
by jarek » Fri, 2013-09-13 09:24
2
3,798 by jarek
Mon, 2014-04-21 06:48
Normal topic Mutations are ignored (fixbb) when using -auto_setup_metals option
by hdelrisco » Wed, 2019-06-19 15:43
1
1,514 by smlewis
Fri, 2019-06-28 13:56
Normal topic N-Terminal Galactose
by SebastianBB » Mon, 2022-11-21 08:33
0
565 by SebastianBB
Mon, 2022-11-21 08:33
Normal topic Native gives higher (positive) than lowest energy and clustered decoys
by tiagogomes89 » Thu, 2011-06-02 07:19
6
5,626 by rmoretti
Mon, 2014-04-21 06:47
Normal topic nbr_atom in ligand docking
by phanvy » Fri, 2015-07-03 07:40
1
2,434 by rmoretti
Fri, 2015-07-03 13:04
Normal topic NC atom type [Solved]
by franfdez » Tue, 2012-02-07 16:05
3
4,026 by franfdez
Mon, 2014-04-21 06:47
Normal topic Need help finding the best predicted structure after running ab initio
by burkheadlab » Tue, 2011-06-21 11:18
0
2,099 by burkheadlab
Mon, 2014-04-21 06:47
Normal topic Need help with compilation (How to test if compilation is sucessful)
by greenfur » Fri, 2012-06-29 12:29
1
3,058 by smlewis
Mon, 2014-04-21 06:47
Normal topic Negative design: Can a filter call a mover in rosetta scripts?
by jgans » Sat, 2012-09-08 21:28
2
3,667 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Negative fa_rep on ddG ?
by LiorZ » Thu, 2016-09-08 07:44
1
1,879 by rmoretti
Thu, 2016-09-08 07:56
Normal topic new installation on local computer problem
by lqzhang » Mon, 2010-02-01 08:41
1
1,975 by smlewis
Mon, 2014-04-21 06:47
Hot topic New parametrization problems
by DmitriiN » Wed, 2016-06-08 05:09
25
21,175 by smlewis
Tue, 2016-06-28 09:05
New posts
No new posts
Hot topic with new posts
Hot topic without new posts
Sticky topic
Locked topic
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