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Parallel computing in RosettaDock3.1? by xhluo » Fri, 2010-09-03 02:31 |
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3,124 |
by smlewis Mon, 2014-04-21 06:47 |
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Parallel computing? by mansi » Thu, 2010-08-19 08:39 |
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2,009 |
by smlewis Mon, 2014-04-21 06:47 |
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Parallel Installation of ROSETTA3.1 by anirbanzz » Mon, 2009-12-07 21:09 |
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1,896 |
by smlewis Mon, 2014-04-21 06:47 |
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parameter file of GLU protonated (GLU_P1.params) by rohi » Sat, 2021-06-05 20:44 |
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720 |
by nannemdp Sun, 2021-06-06 09:26 |
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Parametrisation problems by DmitriiN » Tue, 2016-05-31 09:37 |
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2,064 |
by DmitriiN Wed, 2016-06-01 15:46 |
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params file for beta-amino acids by phonez » Mon, 2021-03-29 18:30 |
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1,749 |
by everyday847 Thu, 2021-04-01 11:59 |
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Params file for Methane by dasdevashishdas » Sun, 2018-10-07 21:34 |
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1,218 |
by rmoretti Mon, 2018-10-08 11:20 |
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partial charge of params file in ligand docking by rohi » Fri, 2021-05-28 08:43 |
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946 |
by rmoretti Fri, 2021-05-28 08:54 |
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Partial homology modeling in Rosetta by al614 » Mon, 2016-10-31 12:30 |
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1,778 |
by rmoretti Mon, 2016-11-14 15:12 |
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patch file modification for ser_phosphorylated.txt by hajar » Sun, 2020-06-21 00:49 |
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1,183 |
by matteoferla Tue, 2020-06-23 10:58 |
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Patches for post-translational modifications by ltrabuco » Tue, 2011-02-22 01:00 |
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3,637 |
by ltrabuco Mon, 2014-04-21 06:47 |
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pdb 2 silent with ss information by kalabharath » Sun, 2013-04-14 20:59 |
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2,135 |
by smlewis Mon, 2014-04-21 06:47 |
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pdb files in Rosetta format by zhisheng » Mon, 2011-10-31 08:52 |
6 |
6,443 |
by smlewis Mon, 2014-04-21 06:47 |
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PDB HETATM by hwillis » Thu, 2009-08-06 12:03 |
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3,736 |
by smlewis Mon, 2014-04-21 06:47 |
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PDB output sum by enoee » Fri, 2010-07-16 12:29 |
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1,861 |
by smlewis Mon, 2014-04-21 06:47 |
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PDB weird to PDB rosetta friendly by jpfuenzalidawx » Fri, 2022-09-02 04:43 |
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238 |
by rmoretti Tue, 2022-09-06 08:13 |
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pepspec aplication - segmentation fault by tiagogomes89 » Fri, 2011-09-02 11:18 |
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3,703 |
by smlewis Mon, 2014-04-21 06:47 |
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Peptide building by berk » Thu, 2015-07-30 06:53 |
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2,540 |
by rmoretti Thu, 2015-08-06 09:21 |
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Performace Benchmarking by Tushar Kush » Wed, 2019-12-04 02:50 |
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1,838 |
by smlewis Wed, 2019-12-04 13:07 |
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Performance improvement in AbinitioRelax and relax 3.2 ??? by smg3d » Sun, 2011-02-06 08:59 |
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1,965 |
by smlewis Mon, 2014-04-21 06:47 |
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Peripheral membrane protein modeling by Fukiishi » Tue, 2018-10-02 02:09 |
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2,334 |
by matteoferla Thu, 2018-10-04 01:30 |
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perturb_temp flag by Loki01 » Tue, 2018-11-27 05:06 |
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1,576 |
by rmoretti Wed, 2019-04-03 09:58 |
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Picking the correct model from a large set of decoys (30,000+) by brspurri » Thu, 2012-04-26 15:37 |
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5,005 |
by rmoretti Mon, 2014-04-21 06:47 |
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PIPER-FlexPepDock protocol file apply_ftresult.py missing by diasmarieli » Thu, 2021-11-04 06:33 |
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1,005 |
by diasmarieli Fri, 2021-11-26 05:11 |
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pKa prediction using the Rosetta scoring function by das » Tue, 2016-06-21 06:42 |
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1,589 |
by ssrb Tue, 2016-07-12 10:02 |
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Plexpepdock with Zn by phanvy » Sun, 2014-06-22 22:40 |
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1,773 |
by nawsad Wed, 2014-06-25 13:26 |
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Plexpepdock with Zn by phanvy » Wed, 2014-06-25 06:10 |
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1,833 |
by rmoretti Tue, 2014-11-04 10:35 |
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pmut and scoring by ldlamini » Tue, 2021-09-14 00:46 |
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1,296 |
by matteoferla Mon, 2021-09-20 06:05 |
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pNNMAKE compilation by adva » Sun, 2012-12-02 03:59 |
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7,584 |
by smlewis Mon, 2014-04-21 06:47 |
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Porblem with Rosetta Homology Modelling by Karthik » Wed, 2022-07-13 23:45 |
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233 |
by Karthik Wed, 2022-07-13 23:45 |
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pose.energies().total_enegies().show_nonzero() changes after packer is applied by Liviu Copoiu » Mon, 2022-11-07 16:51 |
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272 |
by Liviu Copoiu Tue, 2022-11-08 10:43 |
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Possible documentation error by imurch » Tue, 2012-04-17 00:11 |
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2,163 |
by Anonymous Mon, 2014-04-21 06:47 |
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possible error in make_fragments.pl and fix by DanielK » Fri, 2012-04-27 02:23 |
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1,487 |
by DanielK Mon, 2014-04-21 06:47 |
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possible error in make_fragments.pl and fix by DanielK » Fri, 2012-04-27 02:21 |
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1,262 |
by DanielK Mon, 2014-04-21 06:47 |
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possible error in make_fragments.pl and fix by DanielK » Fri, 2012-04-27 02:21 |
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1,439 |
by DanielK Mon, 2014-04-21 06:47 |
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possible error in make_fragments.pl and fix by DanielK » Fri, 2012-04-27 02:23 |
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2,570 |
by DanielK Mon, 2014-04-21 06:47 |
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possible idealize app bug - residues being deleted by jtmacd » Mon, 2009-06-08 06:27 |
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2,361 |
by jtmacd Mon, 2014-04-21 06:47 |
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Possible Shellshock Patch problem results in no output files being written by hazards » Wed, 2014-10-22 13:48 |
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5,924 |
by rmoretti Mon, 2014-11-03 16:39 |
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postive score models from AbinitioRelax by xpzhang » Fri, 2012-06-22 12:34 |
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3,672 |
by smlewis Mon, 2014-04-21 06:47 |
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Potentially incorrect heavyAtoms_end() iterator in core/conformation/Residue.hh by tsjain » Wed, 2012-08-15 12:20 |
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2,790 |
by smlewis Mon, 2014-04-21 06:47 |
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Predict the N-terminal of a protein by aliaselin » Mon, 2010-11-08 03:23 |
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2,234 |
by smlewis Mon, 2014-04-21 06:47 |
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Predicting structure of protein after a few mutations by Delfosse57 » Thu, 2022-12-01 20:40 |
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258 |
by Delfosse57 Thu, 2022-12-01 20:40 |
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prepack vs. relax with bb_cst by Anonymous » Mon, 2012-06-25 06:50 |
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2,301 |
by smlewis Mon, 2014-04-21 06:47 |
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Prepacking crashing using metalloprotein by mb0261 » Tue, 2022-12-06 10:16 |
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254 |
by mb0261 Tue, 2022-12-06 10:16 |
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prepare PDB with constrained relax by jarod » Sun, 2013-05-05 07:10 |
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4,681 |
by rmoretti Mon, 2014-04-21 06:47 |
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problem compiling rosetta3.1 in windows vista 32 bit using cygwin 1.7.5-1 by Marsia » Thu, 2010-07-22 22:49 |
18 |
13,758 |
by smlewis Mon, 2014-04-21 06:47 |
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Problem creating pNNMAKE.gnu by anirbanzz » Sat, 2010-04-17 02:14 |
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3,667 |
by monica0569 Mon, 2014-04-21 06:47 |
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Problem in 3D structure building of ss DNA aptamer by irshadbaig » Sun, 2013-11-17 20:15 |
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3,684 |
by rmoretti Mon, 2014-04-21 06:48 |
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problem parsing a THR residue by decrSTL » Wed, 2019-08-21 12:25 |
4 |
2,217 |
by decrSTL Tue, 2019-08-27 10:24 |
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problem plotting results from docking_analyser with provided Rscript by madammolecular » Mon, 2021-02-01 14:44 |
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1,093 |
by amystevens Thu, 2021-09-30 14:18 |
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Problem running make_fragments.pl script by anirbanzz » Thu, 2010-04-22 01:27 |
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1,612 |
by anirbanzz Mon, 2014-04-21 06:47 |
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Problem with 'AddEncounterConstraintMover' by mb0261 » Tue, 2022-06-28 10:00 |
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356 |
by rmoretti Tue, 2022-06-28 11:06 |
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Problem with ClashCountCalculator by masterofpuppets » Wed, 2015-01-07 04:47 |
2 |
2,356 |
by rmoretti Fri, 2015-01-09 10:59 |
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Problem with clustering 1000 centroid pdbs by doranhen » Sat, 2012-04-28 10:34 |
6 |
5,944 |
by doranhen Mon, 2014-04-21 06:47 |
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Problem with HETATM entries in PDB file by asmi » Fri, 2011-05-20 10:17 |
3 |
5,129 |
by smlewis Mon, 2014-04-21 06:47 |
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Problem with match on enzdes by ahuls1 » Thu, 2021-07-29 13:21 |
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803 |
by ahuls1 Thu, 2021-07-29 13:23 |
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Problem with outputing decoys in the process of AbinitioRelax by MA » Thu, 2017-07-13 23:27 |
3 |
2,290 |
by rmoretti Thu, 2017-08-03 08:50 |
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Problem with protein and ligand preparation before ligand docking. by zg148119@ohio.edu » Fri, 2021-02-05 06:47 |
3 |
1,727 |
by rmoretti Tue, 2021-02-09 09:22 |
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Problem With Rosetta3.3 Comparative/Loop Modeling And Constraints by jurkm » Mon, 2011-09-12 01:01 |
6 |
5,482 |
by jurkm Mon, 2014-04-21 06:47 |
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Problem with running turtorial of rna denovo by myle » Fri, 2017-04-14 09:23 |
3 |
2,531 |
by rmoretti Tue, 2017-04-18 13:49 |
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Problem with run_lips.pl script by wdyrka » Tue, 2010-09-07 11:07 |
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2,050 |
by smlewis Mon, 2014-04-21 06:47 |
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Problem with the -dock_ppk flag by lzx32 » Sat, 2011-04-30 00:21 |
4 |
4,178 |
by lzx32 Mon, 2014-04-21 06:47 |
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Problem with the top 25 fragments used in the library of 200 nine-residue fragments in AbinitioRelax by MA » Wed, 2017-07-26 01:12 |
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1,245 |
by rmoretti Mon, 2017-08-21 09:55 |
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Problem with undetected lower and upper terminus variants for new polymer by Martin Floor » Sat, 2022-06-11 06:51 |
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874 |
by matteoferla Fri, 2022-07-01 13:49 |
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Problems compiling tests by molon » Wed, 2009-09-30 07:33 |
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2,679 |
by molon Mon, 2014-04-21 06:47 |
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problems in building rosetta3.1 (solved) by zpliu09 » Wed, 2010-03-31 02:03 |
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1,725 |
by smlewis Mon, 2014-04-21 06:47 |
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Problems in installing Rosetta3 in Red Hat Linux by jjz2009 » Mon, 2009-08-24 19:16 |
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1,900 |
by smlewis Mon, 2014-04-21 06:47 |
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Problems in Loop Modeling by jklett » Mon, 2009-10-19 07:26 |
2 |
2,843 |
by jklett Mon, 2014-04-21 06:47 |
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Problems installing Rosetta by S » Fri, 2010-09-03 01:04 |
4 |
5,541 |
by abdullah_ahmed Mon, 2014-04-21 06:47 |
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Problems with "pdb_renumber.py" in tutorial Advanced Protein-Protein Docking by Sunyp_IM » Sun, 2017-06-25 02:40 |
9 |
7,165 |
by ac.research Mon, 2018-05-14 10:20 |
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problems with cluster program by umeshghosh » Thu, 2010-04-08 07:45 |
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2,228 |
by smlewis Mon, 2014-04-21 06:47 |
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Problems with Cterm_amidation.txt by helenah » Thu, 2020-10-08 04:52 |
8 |
3,605 |
by helenah Tue, 2020-11-03 04:33 |
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Problems with disulphide bonds during KIC by Loki01 » Tue, 2017-11-28 03:11 |
5 |
3,556 |
by Loki01 Thu, 2017-12-14 06:20 |
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Problems with ICOOR when generating polymer params file by liuwenxi » Tue, 2022-08-09 08:33 |
0 |
194 |
by liuwenxi Tue, 2022-08-09 08:33 |
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problems with implementing NOE constraints by connyyu » Thu, 2019-04-11 12:37 |
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1,151 |
by connyyu Thu, 2019-04-18 03:26 |
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Problems with output control by Sunyp_IM » Thu, 2017-06-22 15:30 |
3 |
3,280 |
by rmoretti Wed, 2017-06-28 01:33 |
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Problems with parametrisation by DmitriiN » Fri, 2016-05-27 04:51 |
1 |
1,748 |
by rmoretti Tue, 2016-07-12 08:43 |
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problems with terminal caps by omirus » Tue, 2013-06-25 08:55 |
26 |
25,141 |
by omirus Mon, 2014-04-21 06:48 |
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Produces a set of rotamers from a given residue by a-eatemadi@razi... » Tue, 2017-08-15 08:05 |
5 |
4,331 |
by a-eatemadi@razi... Fri, 2017-09-15 07:45 |
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Program frozen at "protocols.jobdist.JobDistributors: (0) Master Node -- Waiting for job request; tag_ = 1" by Xinhang » Sat, 2020-04-11 14:30 |
1 |
1,241 |
by vmulligan Sat, 2020-04-11 17:40 |
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Propagating the same mutation over "different" chains by mdeklotz » Thu, 2018-07-26 09:27 |
3 |
2,115 |
by rmoretti Fri, 2018-08-03 08:42 |
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Proper indexing of grafted residues by CCDEndsGraftMover by cttm4a1 » Wed, 2022-09-07 23:41 |
0 |
179 |
by cttm4a1 Wed, 2022-09-07 23:41 |
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protein binder interface design error by guowuchen » Thu, 2022-06-23 04:43 |
0 |
306 |
by guowuchen Thu, 2022-06-23 04:43 |
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protein binding energy problem by Lindsay » Thu, 2014-04-17 23:10 |
5 |
5,085 |
by jadolfbr Mon, 2014-04-21 07:30 |
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protein design for increasing its affinity towards ligand by rohi » Fri, 2020-10-30 11:33 |
1 |
1,000 |
by rmoretti Tue, 2021-02-09 12:25 |
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protein design question by bo » Fri, 2012-08-24 10:41 |
33 |
29,575 |
by jyy Wed, 2019-02-20 00:30 |
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Protein Docking Error by ac.research » Thu, 2017-08-17 02:57 |
2 |
1,897 |
by ac.research Fri, 2017-08-18 00:53 |
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protein docking question (Page: 1, 2)
by bo » Tue, 2012-07-24 13:19 |
51 |
53,361 |
by rmoretti Fri, 2015-07-03 13:29 |
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Protein folding using Monte Carlo derived techniques and implicit solvation by hefeweizen » Tue, 2013-12-10 06:30 |
3 |
3,604 |
by rmoretti Mon, 2014-04-21 06:48 |
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protein interface design for multi-chain complex by jarod » Sun, 2013-05-05 23:18 |
16 |
13,354 |
by rmoretti Mon, 2014-04-21 06:47 |
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Protein Interface Design using PSSM by ccruz » Sun, 2020-05-24 14:27 |
1 |
1,453 |
by nannemdp Tue, 2020-05-26 06:33 |
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protein ligand docking by patrickchirdon » Sun, 2018-12-30 15:07 |
4 |
2,695 |
by smlewis Mon, 2018-12-31 08:58 |
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protein location change during Docking protocol by Hyun » Tue, 2022-03-29 19:53 |
0 |
268 |
by Hyun Tue, 2022-03-29 19:53 |
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protein protein docking pipeline by dzhao » Thu, 2012-07-19 06:25 |
4 |
5,260 |
by smlewis Mon, 2014-04-21 06:47 |
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protein surface design by tatsiana.bylund » Sun, 2019-09-15 03:44 |
2 |
1,495 |
by dfcoelho Tue, 2019-11-19 10:16 |
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Protein-Protein Docking by hwillis » Fri, 2009-08-07 01:31 |
1 |
2,307 |
by smlewis Mon, 2014-04-21 06:47 |
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protein-protien docking with uniform trans by lkingsle » Thu, 2012-02-09 07:19 |
1 |
2,372 |
by mpacella Mon, 2014-04-21 06:47 |
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protocols.jd2.JobDistributor: [ ERROR ] by johnnytam100 » Thu, 2019-04-11 09:30 |
5 |
3,547 |
by jadolfbr Tue, 2019-04-16 09:15 |
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pro_closure energy scoring function by peony » Sat, 2013-11-16 13:22 |
5 |
5,207 |
by rmoretti Mon, 2014-04-21 06:48 |
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Public subversion / Enzyme design public app by weallen » Tue, 2009-08-11 20:50 |
6 |
4,660 |
by weallen Mon, 2014-04-21 06:47 |
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