You are here

Rosetta 3 - General

Topic / Topic starter Replies Viewssort ascending Last post
Normal topic what kind of focefield does Rosetta based on?
by albumns » Tue, 2010-07-06 11:08
1
1,708 by smlewis
Mon, 2014-04-21 06:47
Normal topic How to minimize only a few key residues' orientation
by Ronghai Cheng » Mon, 2018-11-05 18:37
2
1,707 by Ronghai Cheng
Tue, 2018-11-13 21:56
Normal topic PDB output sum
by enoee » Fri, 2010-07-16 12:29
1
1,707 by smlewis
Mon, 2014-04-21 06:47
Normal topic opt-E Reference energies
by vijayan » Wed, 2013-08-07 07:35
1
1,707 by rmoretti
Mon, 2014-04-21 06:48
Normal topic RestrictToRepackingRLT and PreventRepackingRLT
by coomteng@gmail.com » Mon, 2018-03-05 11:19
2
1,706 by coomteng@gmail.com
Tue, 2018-03-06 02:31
Normal topic dock & design
by sdh_h » Fri, 2016-09-02 03:07
1
1,705 by rmoretti
Mon, 2016-09-05 09:39
Normal topic DesignByCavityProximity: element not expected
by karenjgonzalez » Tue, 2020-01-28 05:16
4
1,701 by karenjgonzalez
Tue, 2020-02-11 08:44
Normal topic constraints
by lah435 » Sun, 2017-03-12 03:25
2
1,700 by lah435
Mon, 2017-04-03 19:50
Normal topic Why I_sc of Rosetta 2016.02 and 2018.21 are so different?
by eminegenetics » Mon, 2018-07-16 12:51
2
1,699 by eminegenetics
Wed, 2018-07-18 13:48
Normal topic Is it better to have smaller nstruct but many runs?
by Loki01 » Mon, 2018-11-19 11:50
3
1,698 by smlewis
Mon, 2018-11-19 13:20
Normal topic idealization error
by albumns » Mon, 2011-02-07 01:28
1
1,697 by smlewis
Mon, 2014-04-21 06:47
Normal topic segfault in membrane_abinitio2.mpi
by siegert » Sat, 2014-06-14 15:56
1
1,697 by yarovoy
Wed, 2016-03-30 12:37
Normal topic Domain Insertion equivalent in Rosetta 3.2
by SenyorDrew » Wed, 2011-02-09 09:47
1
1,695 by smlewis
Mon, 2014-04-21 06:47
Normal topic have trouble with "relax" models
by wszjzhang » Thu, 2010-01-28 10:02
1
1,694 by smlewis
Mon, 2014-04-21 06:47
Normal topic Could the Relax step be used separately ? (solved)
by wszjzhang » Tue, 2010-03-30 15:00
1
1,692 by smlewis
Mon, 2014-04-21 06:47
Normal topic ligand flexibility
by dave » Thu, 2015-02-12 08:48
1
1,692 by rmoretti
Wed, 2015-02-18 09:17
Normal topic how to do ensemble docking using rosetta3.1
by lqzhang » Mon, 2010-01-11 10:31
1
1,690 by sid
Mon, 2014-04-21 06:47
Normal topic which modules support MPI now?
by albumns » Fri, 2013-11-08 01:32
1
1,688 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Atom_.cc line 304
by fred » Thu, 2014-09-11 12:04
1
1,687 by rmoretti
Fri, 2014-09-12 09:11
Normal topic docking using rosetta3.1 and rosetta2.3 leads to very different results
by lqzhang » Thu, 2010-01-14 11:54
1
1,683 by sid
Mon, 2014-04-21 06:47
Normal topic local refinement
by mahajanr » Mon, 2010-07-19 15:04
1
1,678 by smlewis
Mon, 2014-04-21 06:47
Normal topic Chain specific flags
by helenah » Mon, 2020-10-19 03:31
5
1,676 by rmoretti
Fri, 2020-11-06 08:04
Normal topic Reading chloride anions
by Martin Floor » Mon, 2018-08-27 14:29
2
1,672 by Martin Floor
Tue, 2018-08-28 13:21
Normal topic Energy and RG in the new rosetta3.4 ( like RG_Energy.cc and RG_Energy_Fast.cc )
by sdg_lab » Thu, 2012-04-12 08:49
1
1,667 by smlewis
Mon, 2014-04-21 06:47
Normal topic How to convert fragments to PDB format?
by JadAbbass » Wed, 2015-08-19 04:05
1
1,667 by rmoretti
Wed, 2015-09-02 12:48
Normal topic Loop Insertion/Extension using rosetta suite
by bharat_46010 » Mon, 2011-02-28 04:45
1
1,663 by smlewis
Mon, 2014-04-21 06:47
Normal topic Issues running the Matcher in 3.4 and 3.5
by Jhreed » Tue, 2015-05-26 11:38
1
1,663 by rmoretti
Wed, 2015-06-17 12:43
Normal topic Free FSC score for validating refinement
by ahmadkhalifa » Thu, 2018-05-10 05:53
2
1,662 by ahmadkhalifa
Fri, 2018-06-29 07:54
Normal topic Structure refinement with RDC constraint
by shushunur » Thu, 2018-01-18 00:44
1
1,662 by rmoretti
Tue, 2018-01-30 09:08
Normal topic Available of some protocals mentioned in publications
by SunH » Mon, 2013-09-09 20:47
1
1,660 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Get nchi for heavy atoms
by pachecoj » Tue, 2014-11-04 19:04
1
1,658 by rmoretti
Tue, 2014-11-11 13:22
Normal topic Modeling
by hwillis » Wed, 2009-08-12 11:07
1
1,657 by frichter
Mon, 2014-04-21 06:47
Normal topic demo documentation
by lshi » Fri, 2009-08-28 08:51
1
1,655 by smlewis
Mon, 2014-04-21 06:47
Normal topic RASREC full_run vs. test_run
by Lati » Wed, 2015-10-28 03:26
1
1,653 by Lati
Fri, 2015-11-20 03:32
Normal topic fragment_picker error secondarysimilarity.cc line:132
by leanawen » Mon, 2013-04-15 14:33
1
1,652 by smlewis
Mon, 2014-04-21 06:47
Normal topic Plexpepdock with Zn
by phanvy » Wed, 2014-06-25 06:10
1
1,648 by rmoretti
Tue, 2014-11-04 10:35
Normal topic How NMR structures can be inputted to Rosetta?
by exchhattu » Mon, 2015-02-09 17:44
1
1,644 by rmoretti
Wed, 2015-02-18 09:19
Normal topic optimisation of a protein-protein interface
by sdh_h » Thu, 2017-05-04 05:06
1
1,642 by rmoretti
Mon, 2017-05-15 09:03
Normal topic Output fasta of enzdes generated pdbs
by eyong123 » Tue, 2015-05-19 08:07
1
1,641 by rmoretti
Mon, 2015-05-25 11:07
Normal topic run:test_cycles
by ramin » Sun, 2013-03-10 11:05
1
1,640 by smlewis
Mon, 2014-04-21 06:47
Normal topic De novo density assembly weights don't add up to a 100
by ahmadkhalifa » Fri, 2018-08-03 12:07
3
1,631 by rmoretti
Tue, 2019-10-22 07:05
Normal topic The algorithm of adding missing Hydrogen to a backbone
by ac.research » Tue, 2018-03-06 03:48
1
1,631 by rmoretti
Sat, 2018-03-17 10:43
Normal topic Rosetta and SAM 3.5!
by wtscrystal » Sat, 2009-11-14 22:49
0
1,628 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic Hydrogen bond detection and shape complementarity
by sujigeorge1979 » Fri, 2019-06-14 02:39
3
1,627 by sujigeorge1979
Thu, 2019-06-27 01:30
Normal topic How do the homology sequences exclude from fragment files?
by exchhattu » Mon, 2010-04-05 03:04
1
1,621 by smlewis
Mon, 2014-04-21 06:47
Normal topic About generating Fullatom structures
by wszjzhang » Wed, 2010-03-24 19:27
1
1,619 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic Error with simple_cycpep_predict protocol while using a native pdb file
by Florent Langenfeld » Tue, 2019-03-26 10:05
3
1,614 by Florent Langenfeld
Tue, 2020-09-22 03:03
Normal topic Protein Docking Error
by ac.research » Thu, 2017-08-17 02:57
2
1,612 by ac.research
Fri, 2017-08-18 00:53
Normal topic Calibur not listing cluster members
by Swillard » Sun, 2018-07-01 13:07
2
1,609 by benhardy
Fri, 2021-05-07 07:22
Normal topic unit and scientific tests
by tricia » Sat, 2009-05-09 23:29
1
1,609 by smlewis
Mon, 2014-04-21 06:47
Normal topic setup_run error with multiple resonance lists
by aep » Fri, 2016-03-18 13:36
1
1,605 by rmoretti
Thu, 2016-04-28 15:49
Normal topic rebuilding and refinement
by exchhattu » Tue, 2009-10-06 21:13
1
1,605 by smlewis
Mon, 2014-04-21 06:47
Normal topic H3 modelling scoring function
by aneamtu » Wed, 2017-12-27 23:10
2
1,604 by aneamtu
Mon, 2018-01-08 23:49
Normal topic rosetta compile
by MA » Wed, 2017-04-26 00:46
2
1,601 by MA
Thu, 2017-04-27 18:53
Normal topic Plexpepdock with Zn
by phanvy » Sun, 2014-06-22 22:40
1
1,599 by nawsad
Wed, 2014-06-25 13:26
Normal topic Partial homology modeling in Rosetta
by al614 » Mon, 2016-10-31 12:30
1
1,591 by rmoretti
Mon, 2016-11-14 15:12
Normal topic Installing on windows using MinGW
by abdullah_ahmed » Wed, 2010-09-15 08:45
1
1,591 by smlewis
Mon, 2014-04-21 06:47
Normal topic build rosetta by cross-platform compiler
by jarod » Fri, 2010-05-07 21:49
1
1,590 by smlewis
Mon, 2014-04-21 06:47
Normal topic Scoring Centroid Structures
by Trentage » Sun, 2010-03-28 19:21
0
1,589 by Trentage
Mon, 2014-04-21 06:47
Normal topic Compilation error
by zgcarvalho » Fri, 2010-02-12 06:58
1
1,585 by smlewis
Mon, 2014-04-21 06:47
Normal topic Is CST_Design required for enzdes protocol?
by dasdevashishdas » Mon, 2018-09-03 00:51
2
1,585 by dasdevashishdas
Thu, 2018-09-27 03:35
Normal topic Fitting a structure with an unrecognized residue to an EM density
by ahmadkhalifa » Tue, 2017-12-05 14:44
2
1,581 by ahmadkhalifa
Wed, 2017-12-06 12:30
Normal topic Building Rosetta PROBLEM
by nunesjulioc » Fri, 2010-02-26 06:03
1
1,578 by smlewis
Mon, 2014-04-21 06:47
Normal topic the output of ligand docking
by phanvy » Fri, 2015-07-03 01:27
1
1,576 by rmoretti
Fri, 2015-07-03 13:14
Normal topic Site-wide installations and 64-bit builds
by bene » Tue, 2009-10-20 10:16
1
1,575 by smlewis
Mon, 2014-04-21 06:47
Normal topic Running the Matcher on multiple PDBs
by Jhreed » Thu, 2016-02-18 08:50
1
1,574 by rmoretti
Sun, 2016-02-21 06:38
Normal topic Paper about Plexpepdock
by phanvy » Wed, 2014-06-18 06:29
1
1,566 by nawsad
Fri, 2014-06-20 03:00
Normal topic Custom fold tree
by lah435 » Tue, 2015-03-03 12:02
1
1,565 by rmoretti
Mon, 2015-03-30 16:38
Normal topic Model Extraction
by mdweirna » Tue, 2010-04-13 15:28
1
1,564 by smlewis
Mon, 2014-04-21 06:47
Normal topic Docking with glutathione
by phanvy » Wed, 2015-04-29 22:25
1
1,564 by rmoretti
Thu, 2015-04-30 07:13
Normal topic problems in building rosetta3.1 (solved)
by zpliu09 » Wed, 2010-03-31 02:03
1
1,563 by smlewis
Mon, 2014-04-21 06:47
Normal topic Where to find old version of Rosetta with git version number
by mao_x » Wed, 2019-08-07 01:22
2
1,562 by mao_x
Thu, 2019-08-08 01:37
Normal topic Ineffective Constraints
by Sandy » Tue, 2017-09-05 19:36
2
1,561 by CameronJA
Wed, 2022-01-19 20:50
Normal topic "Illegal Instruction" for particular Movers/Filters
by Jhreed » Thu, 2016-08-11 12:59
1
1,560 by smlewis
Thu, 2016-08-11 13:16
Normal topic error message of runing make_fragment
by joseph » Fri, 2010-11-12 11:46
0
1,559 by joseph
Mon, 2014-04-21 06:47
Normal topic Where is the flag -preserve_input_cb?
by mdyini » Wed, 2011-03-09 14:40
1
1,559 by smlewis
Mon, 2014-04-21 06:47
Normal topic meaning of the clustering the output files
by phanvy » Tue, 2014-06-24 07:11
1
1,558 by rmoretti
Tue, 2014-07-01 12:07
Normal topic Error running GenericMonteCarlo mover within MultipleOutputWrapper mover
by abhi_pe_acharya » Mon, 2018-04-16 04:58
1
1,558 by abhi_pe_acharya
Thu, 2018-04-19 03:49
Normal topic max_nn
by anusmita_sahoo » Thu, 2010-03-11 02:21
1
1,556 by smlewis
Mon, 2014-04-21 06:47
Normal topic Design with non-canonical amino acids (NCAA)
by yinasun » Mon, 2019-08-05 00:34
2
1,554 by matteoferla
Thu, 2019-08-22 05:39
Normal topic replace a short helix
by berk » Wed, 2013-06-05 10:19
1
1,548 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Clarify ProteinInterfaceDesign “randomness”
by tsztain » Wed, 2019-02-27 09:41
3
1,543 by rmoretti
Sat, 2019-03-30 12:12
Normal topic Feedback for Loopmodeling module
by zharmad » Tue, 2013-05-14 03:22
1
1,537 by rmoretti
Mon, 2014-04-21 06:47
Normal topic non-canonical residues parametrisation
by DmitriiN » Tue, 2016-04-05 02:37
1
1,537 by rmoretti
Fri, 2016-04-08 08:43
Normal topic symmetric design without symmetrizing the structure
by sdh_h » Tue, 2016-09-13 05:49
1
1,537 by rmoretti
Tue, 2016-09-13 07:41
Normal topic scoring function changed from 2.3?
by jarod » Mon, 2010-04-12 18:56
1
1,535 by smlewis
Mon, 2014-04-21 06:47
Normal topic How did you begin to learn Rosetta?
by mdeklotz » Mon, 2018-07-30 10:08
1
1,530 by jkleman
Tue, 2018-07-31 13:19
Normal topic Rosetta Antibody: Unable to open file and terminates
by denatured » Thu, 2019-12-12 11:26
1
1,529 by denatured
Fri, 2019-12-13 11:19
Normal topic Rosetta matching error
by purvi24 » Mon, 2018-03-12 02:38
1
1,528 by smlewis
Mon, 2018-03-12 09:57
Normal topic Total Rama Score
by jcminerlanl » Thu, 2018-05-10 07:19
1
1,523 by rmoretti
Thu, 2018-06-28 14:28
Normal topic Problems with parametrisation
by DmitriiN » Fri, 2016-05-27 04:51
1
1,521 by rmoretti
Tue, 2016-07-12 08:43
Normal topic Is there a way to calculate chi1 and chi1+chi differences between two structures?
by sn » Thu, 2017-04-20 21:46
1
1,518 by rmoretti
Fri, 2017-04-21 07:52
Normal topic Rosetta: Clustering
by sskim » Sat, 2016-06-11 14:44
1
1,517 by rmoretti
Tue, 2016-07-12 08:36
Normal topic new installation on local computer problem
by lqzhang » Mon, 2010-02-01 08:41
1
1,515 by smlewis
Mon, 2014-04-21 06:47
Normal topic missing amino acid
by berk » Fri, 2013-06-14 06:07
1
1,515 by smlewis
Mon, 2014-04-21 06:48
Normal topic Interpreting decoy ensemble
by lah435 » Wed, 2015-06-10 10:25
1
1,511 by rmoretti
Fri, 2015-07-03 13:51
Normal topic Divide larger low-res. global run into several smaller runs?
by jasnyderjr » Mon, 2015-12-21 17:41
1
1,509 by smlewis
Tue, 2015-12-22 08:31
Normal topic Using FastSAXS Scoring Protocol
by jurkm » Tue, 2011-09-20 07:40
0
1,509 by jurkm
Mon, 2014-04-21 06:47
Normal topic Errors Rosetta symm refine
by ms4392 » Fri, 2016-10-21 13:56
1
1,507 by rmoretti
Mon, 2016-11-14 14:26
Normal topic extract 10001+ pdbs
by viochemist » Thu, 2010-07-29 16:25
1
1,502 by smlewis
Mon, 2014-04-21 06:47
New posts
No new posts
Hot topic with new posts
Hot topic without new posts
Sticky topic
Locked topic
Subscribe to RSS - Rosetta 3 - General