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Rosetta 3 - General
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what kind of focefield does Rosetta based on? by albumns » Tue, 2010-07-06 11:08 |
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1,708 |
by smlewis Mon, 2014-04-21 06:47 |
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How to minimize only a few key residues' orientation by Ronghai Cheng » Mon, 2018-11-05 18:37 |
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1,707 |
by Ronghai Cheng Tue, 2018-11-13 21:56 |
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PDB output sum by enoee » Fri, 2010-07-16 12:29 |
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1,707 |
by smlewis Mon, 2014-04-21 06:47 |
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opt-E Reference energies by vijayan » Wed, 2013-08-07 07:35 |
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1,707 |
by rmoretti Mon, 2014-04-21 06:48 |
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RestrictToRepackingRLT and PreventRepackingRLT by coomteng@gmail.com » Mon, 2018-03-05 11:19 |
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1,706 |
by coomteng@gmail.com Tue, 2018-03-06 02:31 |
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dock & design by sdh_h » Fri, 2016-09-02 03:07 |
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1,705 |
by rmoretti Mon, 2016-09-05 09:39 |
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DesignByCavityProximity: element not expected by karenjgonzalez » Tue, 2020-01-28 05:16 |
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1,701 |
by karenjgonzalez Tue, 2020-02-11 08:44 |
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constraints by lah435 » Sun, 2017-03-12 03:25 |
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1,700 |
by lah435 Mon, 2017-04-03 19:50 |
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Why I_sc of Rosetta 2016.02 and 2018.21 are so different? by eminegenetics » Mon, 2018-07-16 12:51 |
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1,699 |
by eminegenetics Wed, 2018-07-18 13:48 |
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Is it better to have smaller nstruct but many runs? by Loki01 » Mon, 2018-11-19 11:50 |
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1,698 |
by smlewis Mon, 2018-11-19 13:20 |
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idealization error by albumns » Mon, 2011-02-07 01:28 |
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1,697 |
by smlewis Mon, 2014-04-21 06:47 |
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segfault in membrane_abinitio2.mpi by siegert » Sat, 2014-06-14 15:56 |
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1,697 |
by yarovoy Wed, 2016-03-30 12:37 |
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Domain Insertion equivalent in Rosetta 3.2 by SenyorDrew » Wed, 2011-02-09 09:47 |
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1,695 |
by smlewis Mon, 2014-04-21 06:47 |
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have trouble with "relax" models by wszjzhang » Thu, 2010-01-28 10:02 |
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1,694 |
by smlewis Mon, 2014-04-21 06:47 |
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Could the Relax step be used separately ? （solved） by wszjzhang » Tue, 2010-03-30 15:00 |
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1,692 |
by smlewis Mon, 2014-04-21 06:47 |
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ligand flexibility by dave » Thu, 2015-02-12 08:48 |
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1,692 |
by rmoretti Wed, 2015-02-18 09:17 |
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how to do ensemble docking using rosetta3.1 by lqzhang » Mon, 2010-01-11 10:31 |
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1,690 |
by sid Mon, 2014-04-21 06:47 |
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which modules support MPI now? by albumns » Fri, 2013-11-08 01:32 |
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1,688 |
by rmoretti Mon, 2014-04-21 06:48 |
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Atom_.cc line 304 by fred » Thu, 2014-09-11 12:04 |
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1,687 |
by rmoretti Fri, 2014-09-12 09:11 |
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docking using rosetta3.1 and rosetta2.3 leads to very different results by lqzhang » Thu, 2010-01-14 11:54 |
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1,683 |
by sid Mon, 2014-04-21 06:47 |
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local refinement by mahajanr » Mon, 2010-07-19 15:04 |
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1,678 |
by smlewis Mon, 2014-04-21 06:47 |
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Chain specific flags by helenah » Mon, 2020-10-19 03:31 |
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1,676 |
by rmoretti Fri, 2020-11-06 08:04 |
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Reading chloride anions by Martin Floor » Mon, 2018-08-27 14:29 |
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1,672 |
by Martin Floor Tue, 2018-08-28 13:21 |
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Energy and RG in the new rosetta3.4 ( like RG_Energy.cc and RG_Energy_Fast.cc ) by sdg_lab » Thu, 2012-04-12 08:49 |
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1,667 |
by smlewis Mon, 2014-04-21 06:47 |
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How to convert fragments to PDB format? by JadAbbass » Wed, 2015-08-19 04:05 |
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1,667 |
by rmoretti Wed, 2015-09-02 12:48 |
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Loop Insertion/Extension using rosetta suite by bharat_46010 » Mon, 2011-02-28 04:45 |
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1,663 |
by smlewis Mon, 2014-04-21 06:47 |
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Issues running the Matcher in 3.4 and 3.5 by Jhreed » Tue, 2015-05-26 11:38 |
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1,663 |
by rmoretti Wed, 2015-06-17 12:43 |
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Free FSC score for validating refinement by ahmadkhalifa » Thu, 2018-05-10 05:53 |
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1,662 |
by ahmadkhalifa Fri, 2018-06-29 07:54 |
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Structure refinement with RDC constraint by shushunur » Thu, 2018-01-18 00:44 |
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1,662 |
by rmoretti Tue, 2018-01-30 09:08 |
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Available of some protocals mentioned in publications by SunH » Mon, 2013-09-09 20:47 |
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1,660 |
by rmoretti Mon, 2014-04-21 06:48 |
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Get nchi for heavy atoms by pachecoj » Tue, 2014-11-04 19:04 |
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1,658 |
by rmoretti Tue, 2014-11-11 13:22 |
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Modeling by hwillis » Wed, 2009-08-12 11:07 |
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1,657 |
by frichter Mon, 2014-04-21 06:47 |
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demo documentation by lshi » Fri, 2009-08-28 08:51 |
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1,655 |
by smlewis Mon, 2014-04-21 06:47 |
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RASREC full_run vs. test_run by Lati » Wed, 2015-10-28 03:26 |
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1,653 |
by Lati Fri, 2015-11-20 03:32 |
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fragment_picker error secondarysimilarity.cc line:132 by leanawen » Mon, 2013-04-15 14:33 |
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1,652 |
by smlewis Mon, 2014-04-21 06:47 |
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Plexpepdock with Zn by phanvy » Wed, 2014-06-25 06:10 |
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1,648 |
by rmoretti Tue, 2014-11-04 10:35 |
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How NMR structures can be inputted to Rosetta? by exchhattu » Mon, 2015-02-09 17:44 |
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1,644 |
by rmoretti Wed, 2015-02-18 09:19 |
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optimisation of a protein-protein interface by sdh_h » Thu, 2017-05-04 05:06 |
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1,642 |
by rmoretti Mon, 2017-05-15 09:03 |
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Output fasta of enzdes generated pdbs by eyong123 » Tue, 2015-05-19 08:07 |
1 |
1,641 |
by rmoretti Mon, 2015-05-25 11:07 |
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run:test_cycles by ramin » Sun, 2013-03-10 11:05 |
1 |
1,640 |
by smlewis Mon, 2014-04-21 06:47 |
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De novo density assembly weights don't add up to a 100 by ahmadkhalifa » Fri, 2018-08-03 12:07 |
3 |
1,631 |
by rmoretti Tue, 2019-10-22 07:05 |
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The algorithm of adding missing Hydrogen to a backbone by ac.research » Tue, 2018-03-06 03:48 |
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1,631 |
by rmoretti Sat, 2018-03-17 10:43 |
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Rosetta and SAM 3.5! by wtscrystal » Sat, 2009-11-14 22:49 |
0 |
1,628 |
by wtscrystal Mon, 2014-04-21 06:47 |
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Hydrogen bond detection and shape complementarity by sujigeorge1979 » Fri, 2019-06-14 02:39 |
3 |
1,627 |
by sujigeorge1979 Thu, 2019-06-27 01:30 |
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How do the homology sequences exclude from fragment files? by exchhattu » Mon, 2010-04-05 03:04 |
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1,621 |
by smlewis Mon, 2014-04-21 06:47 |
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About generating Fullatom structures by wszjzhang » Wed, 2010-03-24 19:27 |
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1,619 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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Error with simple_cycpep_predict protocol while using a native pdb file by Florent Langenfeld » Tue, 2019-03-26 10:05 |
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1,614 |
by Florent Langenfeld Tue, 2020-09-22 03:03 |
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Protein Docking Error by ac.research » Thu, 2017-08-17 02:57 |
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1,612 |
by ac.research Fri, 2017-08-18 00:53 |
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Calibur not listing cluster members by Swillard » Sun, 2018-07-01 13:07 |
2 |
1,609 |
by benhardy Fri, 2021-05-07 07:22 |
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unit and scientific tests by tricia » Sat, 2009-05-09 23:29 |
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1,609 |
by smlewis Mon, 2014-04-21 06:47 |
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setup_run error with multiple resonance lists by aep » Fri, 2016-03-18 13:36 |
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1,605 |
by rmoretti Thu, 2016-04-28 15:49 |
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rebuilding and refinement by exchhattu » Tue, 2009-10-06 21:13 |
1 |
1,605 |
by smlewis Mon, 2014-04-21 06:47 |
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H3 modelling scoring function by aneamtu » Wed, 2017-12-27 23:10 |
2 |
1,604 |
by aneamtu Mon, 2018-01-08 23:49 |
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rosetta compile by MA » Wed, 2017-04-26 00:46 |
2 |
1,601 |
by MA Thu, 2017-04-27 18:53 |
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Plexpepdock with Zn by phanvy » Sun, 2014-06-22 22:40 |
1 |
1,599 |
by nawsad Wed, 2014-06-25 13:26 |
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Partial homology modeling in Rosetta by al614 » Mon, 2016-10-31 12:30 |
1 |
1,591 |
by rmoretti Mon, 2016-11-14 15:12 |
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Installing on windows using MinGW by abdullah_ahmed » Wed, 2010-09-15 08:45 |
1 |
1,591 |
by smlewis Mon, 2014-04-21 06:47 |
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build rosetta by cross-platform compiler by jarod » Fri, 2010-05-07 21:49 |
1 |
1,590 |
by smlewis Mon, 2014-04-21 06:47 |
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Scoring Centroid Structures by Trentage » Sun, 2010-03-28 19:21 |
0 |
1,589 |
by Trentage Mon, 2014-04-21 06:47 |
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Compilation error by zgcarvalho » Fri, 2010-02-12 06:58 |
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1,585 |
by smlewis Mon, 2014-04-21 06:47 |
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Is CST_Design required for enzdes protocol? by dasdevashishdas » Mon, 2018-09-03 00:51 |
2 |
1,585 |
by dasdevashishdas Thu, 2018-09-27 03:35 |
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Fitting a structure with an unrecognized residue to an EM density by ahmadkhalifa » Tue, 2017-12-05 14:44 |
2 |
1,581 |
by ahmadkhalifa Wed, 2017-12-06 12:30 |
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Building Rosetta PROBLEM by nunesjulioc » Fri, 2010-02-26 06:03 |
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1,578 |
by smlewis Mon, 2014-04-21 06:47 |
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the output of ligand docking by phanvy » Fri, 2015-07-03 01:27 |
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1,576 |
by rmoretti Fri, 2015-07-03 13:14 |
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Site-wide installations and 64-bit builds by bene » Tue, 2009-10-20 10:16 |
1 |
1,575 |
by smlewis Mon, 2014-04-21 06:47 |
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Running the Matcher on multiple PDBs by Jhreed » Thu, 2016-02-18 08:50 |
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1,574 |
by rmoretti Sun, 2016-02-21 06:38 |
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Paper about Plexpepdock by phanvy » Wed, 2014-06-18 06:29 |
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1,566 |
by nawsad Fri, 2014-06-20 03:00 |
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Custom fold tree by lah435 » Tue, 2015-03-03 12:02 |
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1,565 |
by rmoretti Mon, 2015-03-30 16:38 |
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Model Extraction by mdweirna » Tue, 2010-04-13 15:28 |
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1,564 |
by smlewis Mon, 2014-04-21 06:47 |
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Docking with glutathione by phanvy » Wed, 2015-04-29 22:25 |
1 |
1,564 |
by rmoretti Thu, 2015-04-30 07:13 |
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problems in building rosetta3.1 (solved) by zpliu09 » Wed, 2010-03-31 02:03 |
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1,563 |
by smlewis Mon, 2014-04-21 06:47 |
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Where to find old version of Rosetta with git version number by mao_x » Wed, 2019-08-07 01:22 |
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1,562 |
by mao_x Thu, 2019-08-08 01:37 |
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Ineffective Constraints by Sandy » Tue, 2017-09-05 19:36 |
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1,561 |
by CameronJA Wed, 2022-01-19 20:50 |
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"Illegal Instruction" for particular Movers/Filters by Jhreed » Thu, 2016-08-11 12:59 |
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1,560 |
by smlewis Thu, 2016-08-11 13:16 |
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error message of runing make_fragment by joseph » Fri, 2010-11-12 11:46 |
0 |
1,559 |
by joseph Mon, 2014-04-21 06:47 |
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Where is the flag -preserve_input_cb? by mdyini » Wed, 2011-03-09 14:40 |
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1,559 |
by smlewis Mon, 2014-04-21 06:47 |
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meaning of the clustering the output files by phanvy » Tue, 2014-06-24 07:11 |
1 |
1,558 |
by rmoretti Tue, 2014-07-01 12:07 |
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Error running GenericMonteCarlo mover within MultipleOutputWrapper mover by abhi_pe_acharya » Mon, 2018-04-16 04:58 |
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1,558 |
by abhi_pe_acharya Thu, 2018-04-19 03:49 |
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max_nn by anusmita_sahoo » Thu, 2010-03-11 02:21 |
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1,556 |
by smlewis Mon, 2014-04-21 06:47 |
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Design with non-canonical amino acids (NCAA) by yinasun » Mon, 2019-08-05 00:34 |
2 |
1,554 |
by matteoferla Thu, 2019-08-22 05:39 |
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replace a short helix by berk » Wed, 2013-06-05 10:19 |
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1,548 |
by rmoretti Mon, 2014-04-21 06:48 |
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Clarify ProteinInterfaceDesign “randomness” by tsztain » Wed, 2019-02-27 09:41 |
3 |
1,543 |
by rmoretti Sat, 2019-03-30 12:12 |
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Feedback for Loopmodeling module by zharmad » Tue, 2013-05-14 03:22 |
1 |
1,537 |
by rmoretti Mon, 2014-04-21 06:47 |
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non-canonical residues parametrisation by DmitriiN » Tue, 2016-04-05 02:37 |
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1,537 |
by rmoretti Fri, 2016-04-08 08:43 |
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symmetric design without symmetrizing the structure by sdh_h » Tue, 2016-09-13 05:49 |
1 |
1,537 |
by rmoretti Tue, 2016-09-13 07:41 |
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scoring function changed from 2.3? by jarod » Mon, 2010-04-12 18:56 |
1 |
1,535 |
by smlewis Mon, 2014-04-21 06:47 |
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How did you begin to learn Rosetta? by mdeklotz » Mon, 2018-07-30 10:08 |
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1,530 |
by jkleman Tue, 2018-07-31 13:19 |
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Rosetta Antibody: Unable to open file and terminates by denatured » Thu, 2019-12-12 11:26 |
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1,529 |
by denatured Fri, 2019-12-13 11:19 |
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Rosetta matching error by purvi24 » Mon, 2018-03-12 02:38 |
1 |
1,528 |
by smlewis Mon, 2018-03-12 09:57 |
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Total Rama Score by jcminerlanl » Thu, 2018-05-10 07:19 |
1 |
1,523 |
by rmoretti Thu, 2018-06-28 14:28 |
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Problems with parametrisation by DmitriiN » Fri, 2016-05-27 04:51 |
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1,521 |
by rmoretti Tue, 2016-07-12 08:43 |
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Is there a way to calculate chi1 and chi1+chi differences between two structures? by sn » Thu, 2017-04-20 21:46 |
1 |
1,518 |
by rmoretti Fri, 2017-04-21 07:52 |
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Rosetta: Clustering by sskim » Sat, 2016-06-11 14:44 |
1 |
1,517 |
by rmoretti Tue, 2016-07-12 08:36 |
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new installation on local computer problem by lqzhang » Mon, 2010-02-01 08:41 |
1 |
1,515 |
by smlewis Mon, 2014-04-21 06:47 |
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missing amino acid by berk » Fri, 2013-06-14 06:07 |
1 |
1,515 |
by smlewis Mon, 2014-04-21 06:48 |
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Interpreting decoy ensemble by lah435 » Wed, 2015-06-10 10:25 |
1 |
1,511 |
by rmoretti Fri, 2015-07-03 13:51 |
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Divide larger low-res. global run into several smaller runs? by jasnyderjr » Mon, 2015-12-21 17:41 |
1 |
1,509 |
by smlewis Tue, 2015-12-22 08:31 |
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Using FastSAXS Scoring Protocol by jurkm » Tue, 2011-09-20 07:40 |
0 |
1,509 |
by jurkm Mon, 2014-04-21 06:47 |
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Errors Rosetta symm refine by ms4392 » Fri, 2016-10-21 13:56 |
1 |
1,507 |
by rmoretti Mon, 2016-11-14 14:26 |
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extract 10001+ pdbs by viochemist » Thu, 2010-07-29 16:25 |
1 |
1,502 |
by smlewis Mon, 2014-04-21 06:47 |
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