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Rosetta++ - General
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READ ME FIRST by rmoretti » Fri, 2015-09-04 15:23 |
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3,628 |
by rmoretti Tue, 2017-06-20 08:48 |
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Getting the scorefilter value from a calibration run by lcavallo » Fri, 2009-03-20 06:18 |
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1,833 |
by lcavallo Mon, 2014-04-21 06:47 |
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Unrecognized Residues in RosettaDock by mboggara » Sat, 2010-03-20 19:48 |
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2,203 |
by mboggara Mon, 2014-04-21 06:47 |
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To add/include unusual amino acids in RosettaDesign by shirleyzheng » Mon, 2009-07-06 09:34 |
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2,004 |
by shirleyzheng Mon, 2014-04-21 06:47 |
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building parallel Rosetta 2.3 on a 64-bit machine by dwoods » Mon, 2008-10-27 11:21 |
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1,548 |
by dwoods Mon, 2014-04-21 06:47 |
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Re-building protocol crash by murgantia » Sun, 2011-03-13 05:28 |
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2,040 |
by murgantia Mon, 2014-04-21 06:47 |
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rosetta3 compliation by sdh » Mon, 2009-05-04 03:16 |
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1,758 |
by sdh Mon, 2014-04-21 06:47 |
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problems building rosetta 2.3.0 with icc by lcavallo » Wed, 2009-03-04 05:32 |
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2,070 |
by lcavallo Mon, 2014-04-21 06:47 |
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Deb or rpm files? by tlmcraig » Wed, 2008-08-20 23:24 |
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1,422 |
by tlmcraig Mon, 2014-04-21 06:47 |
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Unable to determine sequence length from pdb file by imartins » Tue, 2008-09-30 11:50 |
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1,439 |
by imartins Mon, 2014-04-21 06:47 |
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-regions by mdyini » Wed, 2009-11-25 15:35 |
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1,968 |
by mdyini Mon, 2014-04-21 06:47 |
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Subclusters - what are they? by Bob3k » Mon, 2009-06-15 05:58 |
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2,159 |
by Bob3k Mon, 2014-04-21 06:47 |
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pose_ligand_docking? and constraint file... by mdyini » Wed, 2009-07-01 20:13 |
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2,060 |
by mdyini Mon, 2014-04-21 06:47 |
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Which vall version are make_fragment based on? by lennylv » Thu, 2009-04-02 05:00 |
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1,893 |
by lennylv Mon, 2014-04-21 06:47 |
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Consistency of interface DDG calculations by JuliusSu » Sun, 2014-03-30 21:35 |
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1,526 |
by JuliusSu Sun, 2014-03-30 21:35 |
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use of constraints by anusmita_sahoo » Thu, 2010-06-10 10:54 |
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2,045 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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Help with flexible backbone design by neilcifer » Thu, 2008-11-20 10:45 |
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1,796 |
by neilcifer Mon, 2014-04-21 06:47 |
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Cluster methodology by TiagoGomes » Wed, 2009-04-29 11:53 |
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2,117 |
by TiagoGomes Mon, 2014-04-21 06:47 |
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some posts from old forum by admin » Tue, 2008-04-22 11:05 |
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2,322 |
by admin Mon, 2014-04-21 06:47 |
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some Q/A about SnugDock by jarod » Fri, 2010-04-30 20:02 |
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2,477 |
by jarod Mon, 2014-04-21 06:47 |
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Timer by Temsiri » Sun, 2008-11-09 06:57 |
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1,379 |
by Temsiri Mon, 2014-04-21 06:47 |
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abinitio by vamsi » Fri, 2008-11-21 12:21 |
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1,663 |
by vamsi Mon, 2014-04-21 06:47 |
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question about antibody modeling and snugdock process option by iojeong » Sun, 2023-04-16 19:18 |
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212 |
by iojeong Sun, 2023-04-16 19:18 |
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Rosetta hangs while generating decoys by lcavallo » Sat, 2009-03-07 02:11 |
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2,044 |
by lcavallo Mon, 2014-04-21 06:47 |
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Using dipolar coupling restraints in Rosetta v2.3 by pager2 » Mon, 2010-03-08 14:54 |
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2,395 |
by pager2 Mon, 2014-04-21 06:47 |
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Questions about -fix_natsc and -trim by mdyini » Thu, 2009-06-11 13:27 |
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1,969 |
by mdyini Mon, 2014-04-21 06:47 |
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run_prof.py by joseph » Fri, 2010-11-05 14:38 |
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2,072 |
by joseph Mon, 2014-04-21 06:47 |
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Input files of RosettaDNA mode by r96631028 » Tue, 2009-04-28 04:39 |
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1,876 |
by r96631028 Mon, 2014-04-21 06:47 |
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Rosetta stops while generating decoys by jjan » Wed, 2010-01-13 00:45 |
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2,060 |
by jjan Mon, 2014-04-21 06:47 |
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rosetta antibody model, the option -snug_fit by jarod » Thu, 2010-04-01 18:30 |
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2,322 |
by jarod Mon, 2014-04-21 06:47 |
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Docking Protocol ERROR by bwp » Wed, 2009-04-08 08:41 |
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1,814 |
by bwp Mon, 2014-04-21 06:47 |
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FAQ by admin » Mon, 2010-08-30 04:22 |
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5,634 |
by admin Sat, 2015-09-05 12:11 |
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How to build a parallel version of rosetta++ (Rosetta2.3.0) ? by ice_flame » Fri, 2011-03-25 22:20 |
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2,637 |
by ice_flame Mon, 2014-04-21 06:47 |
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Rosetta Academic Workshop Series by xavier » Mon, 2009-01-26 11:50 |
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2,490 |
by xavier Mon, 2014-04-21 06:47 |
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got here mapping777777
-1 at ~/rosetta/antibody/scripts/ram_blastscript.pl line 10 by wtscrystal » Mon, 2009-05-04 06:08 |
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1,891 |
by wtscrystal Mon, 2014-04-21 06:47 |
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Why so wried way? by dikov » Fri, 2010-03-05 04:57 |
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2,485 |
by dikov Mon, 2014-04-21 06:47 |
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make fragment by joseph » Sun, 2010-10-31 21:16 |
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2,122 |
by joseph Mon, 2014-04-21 06:47 |
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Compiling Mpilan option by TiagoGomes » Tue, 2009-04-21 05:34 |
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1,834 |
by TiagoGomes Mon, 2014-04-21 06:47 |
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icc versus gcc and 64bit versus 32bit performances by lcavallo » Fri, 2009-02-20 15:29 |
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1,797 |
by lcavallo Mon, 2014-04-21 06:47 |
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Can Rosetta generate proteins with sidechains ? by wszjzhang » Thu, 2010-01-07 13:08 |
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2,057 |
by wszjzhang Mon, 2014-04-21 06:47 |
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How to set gcc optimization level with scons to compile 64bit rosetta-2.3.0 by hazards » Fri, 2009-05-15 14:16 |
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3,679 |
by hazards Mon, 2014-04-21 06:47 |
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BLOUSE62 by AndrewBworth » Tue, 2009-06-16 13:32 |
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2,862 |
by vanita Mon, 2014-04-21 06:47 |
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docking search: first residue centroids, then full atom? by pshannon » Wed, 2008-09-03 15:46 |
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2,249 |
by yiliu Mon, 2014-04-21 06:47 |
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How to prepare the pdblist file for docking_ensmble in Rosetta3.4 This topic has been moved to "Rosetta 3 - General " (View topic) |
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Compiling Rosetta++ 3.1 with alternate gcc by fyros » Thu, 2010-07-22 13:32 |
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3,627 |
by smlewis Mon, 2014-04-21 06:47 |
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ligand dock residue selection by Silice » Mon, 2009-08-03 07:54 |
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2,719 |
by Silice Mon, 2014-04-21 06:47 |
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disulphides are only sometimes formed by danzinho » Mon, 2009-01-19 08:42 |
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2,488 |
by yiliu Mon, 2014-04-21 06:47 |
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Make_fragments.pl database by TiagoGomes » Wed, 2009-10-14 04:46 |
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2,839 |
by brspurri Mon, 2014-04-21 06:47 |
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ulfated tyrosine in Rosetta by yiliu » Thu, 2008-01-10 08:29 |
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2,090 |
by yiliu Mon, 2014-04-21 06:47 |
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how to score a pdb in rosetta 2.3 by Lindsay » Tue, 2012-07-17 08:42 |
1 |
2,794 |
by smlewis Mon, 2014-04-21 06:47 |
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multiple_processor by yiliu » Thu, 2008-01-10 08:47 |
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2,020 |
by yiliu Mon, 2014-04-21 06:47 |
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test.fasta and test.dat files are not available in Rosetta2.3.0 by suj88 » Mon, 2009-03-23 17:14 |
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2,550 |
by yiliu Mon, 2014-04-21 06:47 |
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What's the difference between F and S labeled decoys? by PaulaBanks » Mon, 2013-08-26 23:44 |
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2,604 |
by rmoretti Mon, 2014-04-21 06:48 |
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resemble docking use rosettadock found rms=0 in output by lqzhang » Sun, 2009-07-19 06:01 |
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2,861 |
by lqzhang Mon, 2014-04-21 06:47 |
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Fragment files for incomplet protein by globalcoco » Sat, 2009-04-18 05:16 |
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2,597 |
by vanita Mon, 2014-04-21 06:47 |
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GTP-bound proteins by mbh » Thu, 2008-11-13 11:35 |
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2,018 |
by yiliu Mon, 2014-04-21 06:47 |
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RosettaAntibody, Fv without terminal 3 residues by yuich » Sun, 2010-09-26 21:07 |
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3,277 |
by aroop Mon, 2014-04-21 06:47 |
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Problems in installing Rosetta3 in Red Hat Linux by jjz2009 » Fri, 2009-08-21 08:21 |
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2,868 |
by jjz2009 Mon, 2014-04-21 06:47 |
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difference between score and bk_tot by Lindsay » Wed, 2012-05-23 21:25 |
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2,701 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta 2.1.1 troubleshooting by yiliu » Thu, 2008-01-10 08:51 |
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2,464 |
by yiliu Mon, 2014-04-21 06:47 |
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Prepacking structures using RosettaDock on a Windows platform by suj88 » Fri, 2009-03-13 14:20 |
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3,748 |
by suj88 Mon, 2014-04-21 06:47 |
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how to calc the fa_rep in rosetta2.x? by tianbu » Tue, 2012-07-31 08:38 |
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3,687 |
by rmoretti Mon, 2014-04-21 06:47 |
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distributed computing environment support? by jarod » Sat, 2010-03-13 21:05 |
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3,044 |
by smlewis Mon, 2014-04-21 06:47 |
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Symmetric local protein docking by efratmas » Mon, 2011-01-17 04:52 |
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2,892 |
by smlewis Mon, 2014-04-21 06:47 |
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how long does it take? by Piter_ » Thu, 2008-05-15 06:10 |
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1,959 |
by Elin Mon, 2014-04-21 06:47 |
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Scoring Weights by AndrewBworth » Tue, 2009-07-28 18:08 |
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3,060 |
by momeara Mon, 2014-04-21 06:47 |
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terminus capping by mbellows » Wed, 2009-10-07 11:16 |
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3,446 |
by mboggara Mon, 2014-04-21 06:47 |
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Examples in RosettaDock tutorials by yiliu » Thu, 2008-01-10 08:27 |
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2,525 |
by yiliu Mon, 2014-04-21 06:47 |
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Compilation Error 1 after 'make gcc' command by suj88 » Wed, 2009-02-25 14:24 |
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5,955 |
by Bob3k Mon, 2014-04-21 06:47 |
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compilation failure in 64-bit mode linux system by kw8cr » Wed, 2010-02-24 22:21 |
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4,053 |
by zdn3023 Mon, 2014-04-21 06:47 |
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rg cutoff by yiliu » Thu, 2008-01-10 08:46 |
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2,080 |
by yiliu Mon, 2014-04-21 06:47 |
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Alanine Scanning of UbcH7- E6AP Interface by suj88 » Mon, 2009-03-23 15:58 |
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3,493 |
by kristiankrantz Mon, 2014-04-21 06:47 |
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Computing ddg_binding by hetu » Mon, 2008-09-29 19:11 |
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2,279 |
by yiliu Mon, 2014-04-21 06:47 |
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symmetric design in rosetta3 by sdh » Wed, 2009-07-08 07:30 |
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2,923 |
by smlewis Mon, 2014-04-21 06:47 |
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Side chain sampling by mayo » Wed, 2009-04-15 10:14 |
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2,809 |
by kaufmann Mon, 2014-04-21 06:47 |
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Rosetta-2.3.0 build on MAC OSX 10.5.8 by joseph » Wed, 2010-09-08 10:26 |
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4,660 |
by smlewis Mon, 2014-04-21 06:47 |
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Why a paralleled Rosetta perform like a normal one? by ice_flame » Mon, 2011-03-28 22:23 |
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4,373 |
by smlewis Mon, 2014-04-21 06:47 |
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de novo modeling of a dimer by kosa » Wed, 2009-08-19 05:55 |
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3,146 |
by yangshen Mon, 2014-04-21 06:47 |
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Compiles fine but seg faults on everything by mckinneys » Thu, 2008-07-24 12:28 |
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1,944 |
by yiliu Mon, 2014-04-21 06:47 |
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help!!! by yiliu » Thu, 2008-01-10 08:33 |
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1,949 |
by yiliu Mon, 2014-04-21 06:47 |
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Flexible-backbone Rosetta design (partial flexibility) by shirleyzheng » Mon, 2009-05-11 11:27 |
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2,739 |
by marthapedraza Mon, 2014-04-21 06:47 |
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pNNMAKE and loops zone file by yiliu » Thu, 2008-01-10 08:49 |
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1,975 |
by yiliu Mon, 2014-04-21 06:47 |
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Re orienting files from the PDB. by AndrewBworth » Thu, 2009-06-25 19:09 |
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2,704 |
by vanita Mon, 2014-04-21 06:47 |
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Rosetta Loop Modeling error by mdyini » Tue, 2009-03-31 15:22 |
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2,474 |
by vanita Mon, 2014-04-21 06:47 |
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extract pdb file from silent file .out by anusmita_sahoo » Sun, 2010-05-16 23:50 |
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3,567 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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Rosetta-2.3.0 build on fedora 9 by akneoh » Mon, 2008-11-17 16:22 |
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2,823 |
by Temsiri Mon, 2014-04-21 06:47 |
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working with silent output - mergin, clustering and extracting by kosa » Thu, 2008-05-15 05:54 |
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2,306 |
by yiliu Mon, 2014-04-21 06:47 |
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comparing 2 docking sites : howto ? by lcavallo » Mon, 2009-07-27 13:38 |
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2,825 |
by sid Mon, 2014-04-21 06:47 |
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MPI Rosetta by pager2 » Fri, 2008-08-01 08:13 |
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3,106 |
by yiliu Mon, 2014-04-21 06:47 |
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Constraints on residue size by yiliu » Thu, 2008-01-10 08:44 |
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1,882 |
by yiliu Mon, 2014-04-21 06:47 |
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Barcode constraint file by rkhayat » Fri, 2009-05-15 16:02 |
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2,625 |
by davidk Mon, 2014-04-21 06:47 |
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Rosetta and Membrane Proteins by admin » Fri, 2008-04-18 15:26 |
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2,012 |
by admin Mon, 2014-04-21 06:47 |
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Cluster is down.. by AndrewBworth » Wed, 2009-06-17 10:10 |
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2,738 |
by vanita Mon, 2014-04-21 06:47 |
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starting sequence with flexible backbone design by kmaksim » Mon, 2009-03-23 07:10 |
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2,480 |
by vanita Mon, 2014-04-21 06:47 |
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RosettaDock and -flex_peptide by pshannon » Tue, 2008-09-16 17:56 |
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1,947 |
by yiliu Mon, 2014-04-21 06:47 |
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cluster_info_silent.out GLIB problem by Jungi » Wed, 2009-07-08 01:35 |
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2,857 |
by Jungi Mon, 2014-04-21 06:47 |
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Using -fibril mode by jiyongpark.77 » Thu, 2008-11-20 19:18 |
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2,408 |
by jiyongpark.77 Mon, 2014-04-21 06:47 |
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How to dock structures locally? by rwn » Thu, 2008-05-15 07:26 |
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2,147 |
by yiliu Mon, 2014-04-21 06:47 |
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sequence variability in rosetta design by sdh » Thu, 2009-10-15 03:44 |
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2,793 |
by smlewis Mon, 2014-04-21 06:47 |
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module reconstruct_PDB_by_index
module reconstruct_PDB_by_index by yiliu » Thu, 2008-01-10 08:30 |
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2,005 |
by yiliu Mon, 2014-04-21 06:47 |
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