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Rosetta++ - General
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READ ME FIRST by rmoretti » Fri, 2015-09-04 15:23 |
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4,120 |
by rmoretti Tue, 2017-06-20 08:48 |
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multigraft design by spraha » Wed, 2012-01-11 07:57 |
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34,761 |
by Sergey Menis Mon, 2014-04-21 06:47 |
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clustering_decoy by icb_bio » Thu, 2008-05-08 18:34 |
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10,932 |
by kosa Mon, 2014-04-21 06:47 |
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How does Rosetta calculate rms? by rwn » Thu, 2008-05-15 07:41 |
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17,584 |
by rmoretti Tue, 2014-10-14 08:05 |
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To apply distance constraint to MULTIPLE residue pairs, what's the format? by shirleyzheng » Mon, 2009-04-06 10:24 |
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11,337 |
by wtscrystal Mon, 2014-04-21 06:47 |
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make_fragment by icb_bio » Tue, 2008-05-06 22:12 |
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8,199 |
by aork Mon, 2014-04-21 06:47 |
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How to reconstruct full atom structure from silent file by kosa » Mon, 2008-06-23 07:25 |
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7,195 |
by yiliu Mon, 2014-04-21 06:47 |
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Dunbrack rotamer energy term... by tsjain » Mon, 2011-06-13 15:19 |
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11,165 |
by qlj Mon, 2014-04-21 06:47 |
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modelling loops and inserted domains by danzinho » Fri, 2009-01-16 02:14 |
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7,696 |
by wenchangyu2008 Mon, 2014-04-21 06:47 |
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Increase compactness of decoys by kosa » Sat, 2008-06-21 12:47 |
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4,704 |
by kosa Mon, 2014-04-21 06:47 |
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Compiling Rosetta on Intel Macs running Leopard (OS X 10.5) by pager2 » Tue, 2008-07-08 11:59 |
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15,171 |
by rmoretti Thu, 2014-06-05 11:17 |
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disulfid bonds by blaumbaer » Wed, 2008-04-30 10:21 |
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7,670 |
by khorvash Thu, 2017-01-19 15:05 |
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random seed by kosa » Thu, 2008-05-08 03:11 |
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8,792 |
by rmoretti Tue, 2017-06-20 08:47 |
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how do you test if your rosetta.xxx is indeed correctly built? by tru » Thu, 2008-04-24 08:04 |
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5,702 |
by tru Mon, 2014-04-21 06:47 |
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RosettaDesign (each run produces the same sequence with many GLY residues ) by shirleyzheng » Wed, 2009-05-13 10:25 |
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6,296 |
by shirleyzheng Mon, 2014-04-21 06:47 |
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Installation report and instructions: Ubuntu 8.10 64 bit by TamirEr » Mon, 2009-01-12 11:18 |
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7,247 |
by chinhsutran Mon, 2014-04-21 06:47 |
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Can not build the parallel version of rosetta-2.3.1 (the SnugDock). Help!! by ice_flame » Fri, 2011-11-11 07:53 |
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5,488 |
by ice_flame Mon, 2014-04-21 06:47 |
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RosettaDock with loop rebuild HOWTO ? by lcavallo » Thu, 2009-06-04 09:12 |
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5,656 |
by mchldln Mon, 2014-04-21 06:47 |
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Does rosetta 3.3 have different energy terms from 2.3 (fixbb design) by Lindsay » Mon, 2012-07-16 13:12 |
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5,967 |
by smlewis Mon, 2014-04-21 06:47 |
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ERROR:: Can't find starting structure: ../prepack/test.pdb by tru » Thu, 2008-04-24 07:25 |
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5,636 |
by yiliu Mon, 2014-04-21 06:47 |
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the energy terms in fixbb by tianbu » Sun, 2012-07-29 12:48 |
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6,647 |
by tianbu Mon, 2014-04-21 06:47 |
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question about file: cluster_info_silent by admin » Fri, 2008-04-18 15:19 |
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4,244 |
by ndousis Mon, 2014-04-21 06:47 |
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make_fragments by ctaylor » Mon, 2009-09-21 12:42 |
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5,961 |
by smlewis Mon, 2014-04-21 06:47 |
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RosettaDesign parameters by gbeckham » Tue, 2008-07-01 18:03 |
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4,516 |
by yiliu Mon, 2014-04-21 06:47 |
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Rosetta doesn't read the starting structure - solved by Bob3k » Fri, 2009-02-06 02:00 |
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6,692 |
by Bob3k Mon, 2014-04-21 06:47 |
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Rosetta3 - docking_protocol - fold_tree and number of residues problem by dsept » Sat, 2009-09-05 11:32 |
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7,309 |
by sid Mon, 2014-04-21 06:47 |
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RosettaDock: questions about Fab file and constraints by lucasimonelli » Thu, 2008-10-09 05:57 |
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3,572 |
by yiliu Mon, 2014-04-21 06:47 |
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how do I repeat relax runs and get scoring functions at every state by Temsiri » Mon, 2008-11-03 19:42 |
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3,384 |
by vanita Mon, 2014-04-21 06:47 |
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how to get around no sequence for de novo design? by neilcifer » Mon, 2008-10-06 15:01 |
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3,663 |
by huxz Mon, 2014-04-21 06:47 |
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how to change the parameter weight in rosetta 2.3 by Lindsay » Tue, 2012-04-24 14:09 |
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4,959 |
by Lindsay Mon, 2014-04-21 06:47 |
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Loop modeling with multiple chains by sonyadave » Tue, 2008-05-06 13:44 |
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4,809 |
by sonyadave Mon, 2014-04-21 06:47 |
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Build Problem on 64 bit Gentoo by spetzjoe » Thu, 2008-11-20 12:24 |
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5,022 |
by dberkholz Mon, 2014-04-21 06:47 |
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Does any paper descript rosetta2.3's scoring function (fixbb ) by tianbu » Fri, 2012-07-27 14:50 |
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5,045 |
by smlewis Mon, 2014-04-21 06:47 |
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weighted constraints by mintseris » Mon, 2014-02-03 15:24 |
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4,613 |
by rmoretti Thu, 2014-02-06 09:06 |
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How to model a protein that dimerizes to a small molecule? This topic has been moved to "Rosetta 3 - General " (View topic) |
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producing good idealized structures by lesi » Thu, 2009-06-18 15:06 |
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5,151 |
by sid Mon, 2014-04-21 06:47 |
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N-terminus and loops by sreiling » Thu, 2009-01-29 08:27 |
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4,350 |
by vanita Mon, 2014-04-21 06:47 |
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ab initio with restraint by Elin » Thu, 2008-08-28 18:42 |
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2,929 |
by Elin Mon, 2014-04-21 06:47 |
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Can Rosetta Antibody build a good model for a new sequence?? by ice_flame » Fri, 2011-04-22 17:56 |
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5,598 |
by Sherpaman Mon, 2014-04-21 06:47 |
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program not terminating... by atoler » Wed, 2009-02-25 06:40 |
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3,436 |
by atoler Mon, 2014-04-21 06:47 |
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About the code.What's the difference between ****.fwd.hh and ****.hh by Run » Sat, 2013-07-20 23:51 |
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4,994 |
by rmoretti Mon, 2014-04-21 06:48 |
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flexible backbone design with multiple chains by lesi » Thu, 2009-06-18 14:57 |
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4,445 |
by lqzhang Mon, 2014-04-21 06:47 |
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rosetta reproducibility by lcavallo » Thu, 2009-03-05 02:55 |
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3,925 |
by lcavallo Mon, 2014-04-21 06:47 |
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Building a PDB from a set of internal coordinates. by jcminerlanl » Mon, 2017-03-06 09:47 |
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3,567 |
by rbhatta8 Tue, 2017-03-07 07:22 |
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what's the meaning of the Ab-Ag Dock with RosettaDock by huairpan » Thu, 2009-10-15 23:26 |
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4,406 |
by huairpan Mon, 2014-04-21 06:47 |
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about SASA interpretation by tarajano » Fri, 2008-06-20 10:17 |
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3,619 |
by tarajano Mon, 2014-04-21 06:47 |
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How to allow rosetta to recognize the ASP and protonated ASP? by Jeffrey_Chen » Mon, 2014-03-24 00:41 |
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2,740 |
by Jeffrey_Chen Tue, 2014-03-25 23:29 |
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Single or multiple decoys from relax? by kosa » Thu, 2008-05-15 06:11 |
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2,920 |
by kosa Mon, 2014-04-21 06:47 |
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AB INITIO WITH METALLOPROTEIN by kaue » Sat, 2012-06-16 04:25 |
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3,870 |
by kaue Mon, 2014-04-21 06:47 |
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Interpreting Clustering Results by PaulaBanks » Sat, 2013-06-08 23:41 |
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5,329 |
by rmoretti Mon, 2014-04-21 06:48 |
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error--rosetta fragment‐based refinement protocol for refinement against EM density This topic has been moved to "Rosetta 3 - General " (View topic) |
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Rosetta for Windows by jp » Wed, 2008-04-23 23:38 |
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7,953 |
by yiliu Mon, 2014-04-21 06:47 |
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Pose Docking by AndrewBworth » Sat, 2009-08-08 12:50 |
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4,246 |
by matchf Mon, 2014-04-21 06:47 |
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Missing make options for 64-bit platforms in RosettaBundle-2.3.0.gz by dean » Fri, 2008-06-06 04:17 |
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2,805 |
by rmosca Mon, 2014-04-21 06:47 |
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Ab Initio by vamsi » Fri, 2008-11-21 12:42 |
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3,793 |
by rmoretti Mon, 2014-04-21 06:47 |
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all-atom modelling and clustering by danzinho » Fri, 2008-07-25 02:02 |
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2,752 |
by danzinho Mon, 2014-04-21 06:47 |
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running multiple instances of rosetta by yiliu » Thu, 2008-01-10 08:39 |
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3,178 |
by kosa Mon, 2014-04-21 06:47 |
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command lines for rebuilding-and-refinement protocol by Temsiri » Fri, 2008-08-29 08:54 |
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2,866 |
by Temsiri Mon, 2014-04-21 06:47 |
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membrane protein docking by angel » Thu, 2008-10-23 08:50 |
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3,379 |
by yiliu Mon, 2014-04-21 06:47 |
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-no_filter flag in docking by banshee » Tue, 2013-05-28 11:58 |
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3,911 |
by banshee Mon, 2014-04-21 06:47 |
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Linux Distros and Settings by Brev » Tue, 2008-08-19 17:48 |
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3,834 |
by sdarnell Mon, 2014-04-21 06:47 |
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Why should I do prepack before docking? by ice_flame » Wed, 2011-11-16 04:12 |
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4,028 |
by ice_flame Mon, 2014-04-21 06:47 |
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loop modeling with KIC mode by wenchangyu2008 » Tue, 2010-03-02 06:05 |
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4,654 |
by wenchangyu2008 Mon, 2014-04-21 06:47 |
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Docking with pose_loops - frustration! by mchldln » Wed, 2009-06-10 08:44 |
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3,648 |
by mchldln Mon, 2014-04-21 06:47 |
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/usr/bin/ld: cannot find -lmpi_cxx by anusmita_sahoo » Fri, 2010-05-07 10:41 |
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13,994 |
by rlwoltz Mon, 2014-04-21 06:47 |
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RosettaAntibody, Fv without terminal 3 residues by yuich » Sun, 2010-09-26 21:07 |
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3,509 |
by aroop Mon, 2014-04-21 06:47 |
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pNNMAKE and loops zone file by yiliu » Thu, 2008-01-10 08:49 |
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2,156 |
by yiliu Mon, 2014-04-21 06:47 |
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resemble docking use rosettadock found rms=0 in output by lqzhang » Sun, 2009-07-19 06:01 |
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3,098 |
by lqzhang Mon, 2014-04-21 06:47 |
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Rosetta Loop Modeling error by mdyini » Tue, 2009-03-31 15:22 |
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2,672 |
by vanita Mon, 2014-04-21 06:47 |
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Problems in installing Rosetta3 in Red Hat Linux by jjz2009 » Fri, 2009-08-21 08:21 |
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3,093 |
by jjz2009 Mon, 2014-04-21 06:47 |
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working with silent output - mergin, clustering and extracting by kosa » Thu, 2008-05-15 05:54 |
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2,494 |
by yiliu Mon, 2014-04-21 06:47 |
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Rosetta-2.3.0 build on fedora 9 by akneoh » Mon, 2008-11-17 16:22 |
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3,026 |
by Temsiri Mon, 2014-04-21 06:47 |
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difference between score and bk_tot by Lindsay » Wed, 2012-05-23 21:25 |
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2,963 |
by smlewis Mon, 2014-04-21 06:47 |
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distributed computing environment support? by jarod » Sat, 2010-03-13 21:05 |
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3,290 |
by smlewis Mon, 2014-04-21 06:47 |
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how to calc the fa_rep in rosetta2.x? by tianbu » Tue, 2012-07-31 08:38 |
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3,960 |
by rmoretti Mon, 2014-04-21 06:47 |
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MPI Rosetta by pager2 » Fri, 2008-08-01 08:13 |
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3,297 |
by yiliu Mon, 2014-04-21 06:47 |
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Constraints on residue size by yiliu » Thu, 2008-01-10 08:44 |
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2,042 |
by yiliu Mon, 2014-04-21 06:47 |
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starting sequence with flexible backbone design by kmaksim » Mon, 2009-03-23 07:10 |
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2,700 |
by vanita Mon, 2014-04-21 06:47 |
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RosettaDock and -flex_peptide by pshannon » Tue, 2008-09-16 17:56 |
1 |
2,116 |
by yiliu Mon, 2014-04-21 06:47 |
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Symmetric local protein docking by efratmas » Mon, 2011-01-17 04:52 |
1 |
3,142 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta and Membrane Proteins by admin » Fri, 2008-04-18 15:26 |
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2,179 |
by admin Mon, 2014-04-21 06:47 |
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Scoring Weights by AndrewBworth » Tue, 2009-07-28 18:08 |
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3,321 |
by momeara Mon, 2014-04-21 06:47 |
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terminus capping by mbellows » Wed, 2009-10-07 11:16 |
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3,713 |
by mboggara Mon, 2014-04-21 06:47 |
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How to dock structures locally? by rwn » Thu, 2008-05-15 07:26 |
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2,335 |
by yiliu Mon, 2014-04-21 06:47 |
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compilation failure in 64-bit mode linux system by kw8cr » Wed, 2010-02-24 22:21 |
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4,303 |
by zdn3023 Mon, 2014-04-21 06:47 |
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Using -fibril mode by jiyongpark.77 » Thu, 2008-11-20 19:18 |
1 |
2,604 |
by jiyongpark.77 Mon, 2014-04-21 06:47 |
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module reconstruct_PDB_by_index
module reconstruct_PDB_by_index by yiliu » Thu, 2008-01-10 08:30 |
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2,168 |
by yiliu Mon, 2014-04-21 06:47 |
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MinGW build problem by tlmcraig » Thu, 2008-08-21 12:22 |
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3,279 |
by yiliu Mon, 2014-04-21 06:47 |
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Rosetta-2.3.0 build on MAC OSX 10.5.8 by joseph » Wed, 2010-09-08 10:26 |
1 |
4,938 |
by smlewis Mon, 2014-04-21 06:47 |
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Difference between Eres, Ereduce, Enew? by yiliu » Thu, 2008-01-10 08:48 |
1 |
2,660 |
by yiliu Mon, 2014-04-21 06:47 |
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symmetric design in rosetta3 by sdh » Wed, 2009-07-08 07:30 |
1 |
3,188 |
by smlewis Mon, 2014-04-21 06:47 |
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distance restrain rosetta 2.3 by sgrigna » Wed, 2009-03-25 08:42 |
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2,849 |
by vanita Mon, 2014-04-21 06:47 |
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Why a paralleled Rosetta perform like a normal one? by ice_flame » Mon, 2011-03-28 22:23 |
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4,629 |
by smlewis Mon, 2014-04-21 06:47 |
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de novo modeling of a dimer by kosa » Wed, 2009-08-19 05:55 |
1 |
3,390 |
by yangshen Mon, 2014-04-21 06:47 |
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Flexible-backbone Rosetta design (partial flexibility) by shirleyzheng » Mon, 2009-05-11 11:27 |
1 |
2,940 |
by marthapedraza Mon, 2014-04-21 06:47 |
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abinitio modeling by vamsi » Mon, 2008-11-17 12:13 |
1 |
2,134 |
by yiliu Mon, 2014-04-21 06:47 |
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capping termini by luanna » Mon, 2008-05-12 10:50 |
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2,513 |
by yiliu Mon, 2014-04-21 06:47 |
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cluster.pl fails to extract best centers by rmosca » Tue, 2008-12-02 03:10 |
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2,752 |
by yiliu Mon, 2014-04-21 06:47 |
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fragment generation - local vs server by danzinho » Fri, 2008-07-25 02:09 |
1 |
2,353 |
by yiliu Mon, 2014-04-21 06:47 |
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extract pdb file from silent file .out by anusmita_sahoo » Sun, 2010-05-16 23:50 |
1 |
3,810 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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