You are here
Rosetta++ - General
Log in to post new content in the forum.
| Topic / Topic starter | Replies |
Views |
Last post | |
|---|---|---|---|---|
|
Sticky:
READ ME FIRST by rmoretti » Fri, 2015-09-04 15:23 |
1 |
3,630 |
by rmoretti Tue, 2017-06-20 08:48 |
|
|
question about antibody modeling and snugdock process option by iojeong » Sun, 2023-04-16 19:18 |
0 |
215 |
by iojeong Sun, 2023-04-16 19:18 |
|
|
Timer by Temsiri » Sun, 2008-11-09 06:57 |
0 |
1,385 |
by Temsiri Mon, 2014-04-21 06:47 |
|
|
Deb or rpm files? by tlmcraig » Wed, 2008-08-20 23:24 |
0 |
1,426 |
by tlmcraig Mon, 2014-04-21 06:47 |
|
|
Unable to determine sequence length from pdb file by imartins » Tue, 2008-09-30 11:50 |
0 |
1,439 |
by imartins Mon, 2014-04-21 06:47 |
|
|
Consistency of interface DDG calculations by JuliusSu » Sun, 2014-03-30 21:35 |
0 |
1,526 |
by JuliusSu Sun, 2014-03-30 21:35 |
|
|
building parallel Rosetta 2.3 on a 64-bit machine by dwoods » Mon, 2008-10-27 11:21 |
0 |
1,548 |
by dwoods Mon, 2014-04-21 06:47 |
|
|
abinitio by vamsi » Fri, 2008-11-21 12:21 |
0 |
1,667 |
by vamsi Mon, 2014-04-21 06:47 |
|
|
rosetta3 compliation by sdh » Mon, 2009-05-04 03:16 |
0 |
1,763 |
by sdh Mon, 2014-04-21 06:47 |
|
|
Help with flexible backbone design by neilcifer » Thu, 2008-11-20 10:45 |
0 |
1,796 |
by neilcifer Mon, 2014-04-21 06:47 |
|
|
icc versus gcc and 64bit versus 32bit performances by lcavallo » Fri, 2009-02-20 15:29 |
0 |
1,797 |
by lcavallo Mon, 2014-04-21 06:47 |
|
|
Docking Protocol ERROR by bwp » Wed, 2009-04-08 08:41 |
0 |
1,818 |
by bwp Mon, 2014-04-21 06:47 |
|
|
Getting the scorefilter value from a calibration run by lcavallo » Fri, 2009-03-20 06:18 |
0 |
1,834 |
by lcavallo Mon, 2014-04-21 06:47 |
|
|
Compiling Mpilan option by TiagoGomes » Tue, 2009-04-21 05:34 |
0 |
1,835 |
by TiagoGomes Mon, 2014-04-21 06:47 |
|
|
Input files of RosettaDNA mode by r96631028 » Tue, 2009-04-28 04:39 |
0 |
1,877 |
by r96631028 Mon, 2014-04-21 06:47 |
|
|
Constraints on residue size by yiliu » Thu, 2008-01-10 08:44 |
1 |
1,883 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
Which vall version are make_fragment based on? by lennylv » Thu, 2009-04-02 05:00 |
0 |
1,894 |
by lennylv Mon, 2014-04-21 06:47 |
|
|
got here mapping777777
-1 at ~/rosetta/antibody/scripts/ram_blastscript.pl line 10 by wtscrystal » Mon, 2009-05-04 06:08 |
0 |
1,896 |
by wtscrystal Mon, 2014-04-21 06:47 |
|
|
Compiles fine but seg faults on everything by mckinneys » Thu, 2008-07-24 12:28 |
1 |
1,945 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
RosettaDock and -flex_peptide by pshannon » Tue, 2008-09-16 17:56 |
1 |
1,950 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
help!!! by yiliu » Thu, 2008-01-10 08:33 |
1 |
1,951 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
how long does it take? by Piter_ » Thu, 2008-05-15 06:10 |
1 |
1,965 |
by Elin Mon, 2014-04-21 06:47 |
|
|
Questions about -fix_natsc and -trim by mdyini » Thu, 2009-06-11 13:27 |
0 |
1,970 |
by mdyini Mon, 2014-04-21 06:47 |
|
|
-regions by mdyini » Wed, 2009-11-25 15:35 |
0 |
1,970 |
by mdyini Mon, 2014-04-21 06:47 |
|
|
abinitio modeling by vamsi » Mon, 2008-11-17 12:13 |
1 |
1,972 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
pNNMAKE and loops zone file by yiliu » Thu, 2008-01-10 08:49 |
1 |
1,980 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
module reconstruct_PDB_by_index
module reconstruct_PDB_by_index by yiliu » Thu, 2008-01-10 08:30 |
1 |
2,010 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
To add/include unusual amino acids in RosettaDesign by shirleyzheng » Mon, 2009-07-06 09:34 |
0 |
2,010 |
by shirleyzheng Mon, 2014-04-21 06:47 |
|
|
Rosetta and Membrane Proteins by admin » Fri, 2008-04-18 15:26 |
1 |
2,015 |
by admin Mon, 2014-04-21 06:47 |
|
|
GTP-bound proteins by mbh » Thu, 2008-11-13 11:35 |
1 |
2,021 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
multiple_processor by yiliu » Thu, 2008-01-10 08:47 |
1 |
2,022 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
Re-building protocol crash by murgantia » Sun, 2011-03-13 05:28 |
0 |
2,042 |
by murgantia Mon, 2014-04-21 06:47 |
|
|
use of constraints by anusmita_sahoo » Thu, 2010-06-10 10:54 |
0 |
2,047 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
|
|
Rosetta hangs while generating decoys by lcavallo » Sat, 2009-03-07 02:11 |
0 |
2,050 |
by lcavallo Mon, 2014-04-21 06:47 |
|
|
Can Rosetta generate proteins with sidechains ? by wszjzhang » Thu, 2010-01-07 13:08 |
0 |
2,059 |
by wszjzhang Mon, 2014-04-21 06:47 |
|
|
pose_ligand_docking? and constraint file... by mdyini » Wed, 2009-07-01 20:13 |
0 |
2,061 |
by mdyini Mon, 2014-04-21 06:47 |
|
|
Rosetta stops while generating decoys by jjan » Wed, 2010-01-13 00:45 |
0 |
2,062 |
by jjan Mon, 2014-04-21 06:47 |
|
|
run_prof.py by joseph » Fri, 2010-11-05 14:38 |
0 |
2,073 |
by joseph Mon, 2014-04-21 06:47 |
|
|
problems building rosetta 2.3.0 with icc by lcavallo » Wed, 2009-03-04 05:32 |
0 |
2,074 |
by lcavallo Mon, 2014-04-21 06:47 |
|
|
rg cutoff by yiliu » Thu, 2008-01-10 08:46 |
1 |
2,081 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
ulfated tyrosine in Rosetta by yiliu » Thu, 2008-01-10 08:29 |
1 |
2,091 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
Cluster methodology by TiagoGomes » Wed, 2009-04-29 11:53 |
0 |
2,119 |
by TiagoGomes Mon, 2014-04-21 06:47 |
|
|
make fragment by joseph » Sun, 2010-10-31 21:16 |
0 |
2,125 |
by joseph Mon, 2014-04-21 06:47 |
|
|
How to dock structures locally? by rwn » Thu, 2008-05-15 07:26 |
1 |
2,149 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
Subclusters - what are they? by Bob3k » Mon, 2009-06-15 05:58 |
0 |
2,161 |
by Bob3k Mon, 2014-04-21 06:47 |
|
|
fragment generation - local vs server by danzinho » Fri, 2008-07-25 02:09 |
1 |
2,189 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
Unrecognized Residues in RosettaDock by mboggara » Sat, 2010-03-20 19:48 |
0 |
2,207 |
by mboggara Mon, 2014-04-21 06:47 |
|
|
How do you refine the native structure? by yiliu » Thu, 2008-01-10 08:40 |
1 |
2,235 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
docking search: first residue centroids, then full atom? by pshannon » Wed, 2008-09-03 15:46 |
1 |
2,252 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
Computing ddg_binding by hetu » Mon, 2008-09-29 19:11 |
1 |
2,286 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
capping termini by luanna » Mon, 2008-05-12 10:50 |
1 |
2,309 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
working with silent output - mergin, clustering and extracting by kosa » Thu, 2008-05-15 05:54 |
1 |
2,310 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
some posts from old forum by admin » Tue, 2008-04-22 11:05 |
0 |
2,322 |
by admin Mon, 2014-04-21 06:47 |
|
|
rosetta antibody model, the option -snug_fit by jarod » Thu, 2010-04-01 18:30 |
0 |
2,325 |
by jarod Mon, 2014-04-21 06:47 |
|
|
Using dipolar coupling restraints in Rosetta v2.3 by pager2 » Mon, 2010-03-08 14:54 |
0 |
2,396 |
by pager2 Mon, 2014-04-21 06:47 |
|
|
Using -fibril mode by jiyongpark.77 » Thu, 2008-11-20 19:18 |
1 |
2,413 |
by jiyongpark.77 Mon, 2014-04-21 06:47 |
|
|
Rosetta 2.1.1 troubleshooting by yiliu » Thu, 2008-01-10 08:51 |
1 |
2,467 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
How to allow rosetta to recognize the ASP and protonated ASP? by Jeffrey_Chen » Mon, 2014-03-24 00:41 |
2 |
2,472 |
by Jeffrey_Chen Tue, 2014-03-25 23:29 |
|
|
Rosetta Loop Modeling error by mdyini » Tue, 2009-03-31 15:22 |
1 |
2,476 |
by vanita Mon, 2014-04-21 06:47 |
|
|
some Q/A about SnugDock by jarod » Fri, 2010-04-30 20:02 |
0 |
2,480 |
by jarod Mon, 2014-04-21 06:47 |
|
|
starting sequence with flexible backbone design by kmaksim » Mon, 2009-03-23 07:10 |
1 |
2,482 |
by vanita Mon, 2014-04-21 06:47 |
|
|
Why so wried way? by dikov » Fri, 2010-03-05 04:57 |
0 |
2,488 |
by dikov Mon, 2014-04-21 06:47 |
|
|
Rosetta Academic Workshop Series by xavier » Mon, 2009-01-26 11:50 |
0 |
2,492 |
by xavier Mon, 2014-04-21 06:47 |
|
|
Difference between Eres, Ereduce, Enew? by yiliu » Thu, 2008-01-10 08:48 |
1 |
2,492 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
disulphides are only sometimes formed by danzinho » Mon, 2009-01-19 08:42 |
1 |
2,492 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
all-atom modelling and clustering by danzinho » Fri, 2008-07-25 02:02 |
2 |
2,506 |
by danzinho Mon, 2014-04-21 06:47 |
|
|
cluster.pl fails to extract best centers by rmosca » Tue, 2008-12-02 03:10 |
1 |
2,526 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
Examples in RosettaDock tutorials by yiliu » Thu, 2008-01-10 08:27 |
1 |
2,526 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
How to prepare the pdblist file for docking_ensmble in Rosetta3.4 This topic has been moved to "Rosetta 3 - General " (View topic) |
||||
|
test.fasta and test.dat files are not available in Rosetta2.3.0 by suj88 » Mon, 2009-03-23 17:14 |
1 |
2,557 |
by yiliu Mon, 2014-04-21 06:47 |
|
|
Missing make options for 64-bit platforms in RosettaBundle-2.3.0.gz by dean » Fri, 2008-06-06 04:17 |
2 |
2,573 |
by rmosca Mon, 2014-04-21 06:47 |
|
|
Fragment files for incomplet protein by globalcoco » Sat, 2009-04-18 05:16 |
1 |
2,602 |
by vanita Mon, 2014-04-21 06:47 |
|
|
What's the difference between F and S labeled decoys? by PaulaBanks » Mon, 2013-08-26 23:44 |
1 |
2,607 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
Barcode constraint file by rkhayat » Fri, 2009-05-15 16:02 |
1 |
2,631 |
by davidk Mon, 2014-04-21 06:47 |
|
|
distance restrain rosetta 2.3 by sgrigna » Wed, 2009-03-25 08:42 |
1 |
2,639 |
by vanita Mon, 2014-04-21 06:47 |
|
|
How to build a parallel version of rosetta++ (Rosetta2.3.0) ? by ice_flame » Fri, 2011-03-25 22:20 |
0 |
2,640 |
by ice_flame Mon, 2014-04-21 06:47 |
|
|
command lines for rebuilding-and-refinement protocol by Temsiri » Fri, 2008-08-29 08:54 |
2 |
2,655 |
by Temsiri Mon, 2014-04-21 06:47 |
|
|
ab initio with restraint by Elin » Thu, 2008-08-28 18:42 |
2 |
2,699 |
by Elin Mon, 2014-04-21 06:47 |
|
|
Single or multiple decoys from relax? by kosa » Thu, 2008-05-15 06:11 |
2 |
2,704 |
by kosa Mon, 2014-04-21 06:47 |
|
|
difference between score and bk_tot by Lindsay » Wed, 2012-05-23 21:25 |
1 |
2,704 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
Re orienting files from the PDB. by AndrewBworth » Thu, 2009-06-25 19:09 |
1 |
2,705 |
by vanita Mon, 2014-04-21 06:47 |
|
|
ligand dock residue selection by Silice » Mon, 2009-08-03 07:54 |
1 |
2,721 |
by Silice Mon, 2014-04-21 06:47 |
|
|
what is the F() in rosetta 2.3 by Lindsay » Fri, 2012-06-08 14:44 |
1 |
2,722 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
Flexible-backbone Rosetta design (partial flexibility) by shirleyzheng » Mon, 2009-05-11 11:27 |
1 |
2,741 |
by marthapedraza Mon, 2014-04-21 06:47 |
|
|
Cluster is down.. by AndrewBworth » Wed, 2009-06-17 10:10 |
1 |
2,741 |
by vanita Mon, 2014-04-21 06:47 |
|
|
how to score a pdb in rosetta 2.3 by Lindsay » Tue, 2012-07-17 08:42 |
1 |
2,797 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
sequence variability in rosetta design by sdh » Thu, 2009-10-15 03:44 |
1 |
2,799 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
Side chain sampling by mayo » Wed, 2009-04-15 10:14 |
1 |
2,811 |
by kaufmann Mon, 2014-04-21 06:47 |
|
|
Rosetta-2.3.0 build on fedora 9 by akneoh » Mon, 2008-11-17 16:22 |
1 |
2,825 |
by Temsiri Mon, 2014-04-21 06:47 |
|
|
comparing 2 docking sites : howto ? by lcavallo » Mon, 2009-07-27 13:38 |
1 |
2,829 |
by sid Mon, 2014-04-21 06:47 |
|
|
Piecing together multiple domains by AndrewBworth » Mon, 2009-06-22 14:24 |
1 |
2,835 |
by vanita Mon, 2014-04-21 06:47 |
|
|
Make_fragments.pl database by TiagoGomes » Wed, 2009-10-14 04:46 |
1 |
2,840 |
by brspurri Mon, 2014-04-21 06:47 |
|
|
cluster_info_silent.out GLIB problem by Jungi » Wed, 2009-07-08 01:35 |
1 |
2,862 |
by Jungi Mon, 2014-04-21 06:47 |
|
|
resemble docking use rosettadock found rms=0 in output by lqzhang » Sun, 2009-07-19 06:01 |
1 |
2,865 |
by lqzhang Mon, 2014-04-21 06:47 |
|
|
BLOUSE62 by AndrewBworth » Tue, 2009-06-16 13:32 |
1 |
2,866 |
by vanita Mon, 2014-04-21 06:47 |
|
|
Problems in installing Rosetta3 in Red Hat Linux by jjz2009 » Fri, 2009-08-21 08:21 |
1 |
2,872 |
by jjz2009 Mon, 2014-04-21 06:47 |
|
|
Symmetric local protein docking by efratmas » Mon, 2011-01-17 04:52 |
1 |
2,896 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
symmetric design in rosetta3 by sdh » Wed, 2009-07-08 07:30 |
1 |
2,929 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
running multiple instances of rosetta by yiliu » Thu, 2008-01-10 08:39 |
2 |
2,930 |
by kosa Mon, 2014-04-21 06:47 |
|
|
distributed computing environment support? by jarod » Sat, 2010-03-13 21:05 |
1 |
3,049 |
by smlewis Mon, 2014-04-21 06:47 |
|
Log in to post new content in the forum.
