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ROSIE - General

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Sticky topic Sticky: ROSIE FAQ
by Sergey » Mon, 2013-04-08 10:41
6
30,777 by G-Jade
Fri, 2020-12-18 22:40
Normal topic Cancel / delete Rosie not working
by fglaser » Tue, 2015-07-07 01:14
0
1,910 by fglaser
Tue, 2015-07-07 01:14
Normal topic ROSETTA design affinity optimization
by wentlewi » Mon, 2020-02-03 01:42
0
1,665 by wentlewi
Mon, 2020-02-03 01:42
Normal topic Transitioning from ROSIE to Rosetta
by AdoCbl » Wed, 2015-09-23 11:49
0
1,873 by AdoCbl
Wed, 2015-09-23 11:49
Normal topic Running ROSIE from terminal
by sc19 » Thu, 2022-07-14 01:09
0
527 by sc19
Thu, 2022-07-14 01:09
Normal topic Symmetric Docking Protocol
by Sergey » Tue, 2013-10-29 17:33
0
5,610 by Sergey
Mon, 2014-04-21 06:48
Normal topic antibody-antigen interface score
by jessye » Sun, 2018-07-01 21:12
0
1,609 by jessye
Sun, 2018-07-01 21:12
Normal topic Results are NOT emailed
by alsayeghkn » Wed, 2022-03-23 08:55
0
579 by alsayeghkn
Wed, 2022-03-23 08:55
Normal topic Erraser single-residue protocol now open to public
by Sergey » Thu, 2012-10-25 18:21
0
2,242 by Sergey
Mon, 2014-04-21 06:47
Normal topic ROSIE pKa calculation issue
by lijum » Mon, 2020-06-15 12:12
0
1,322 by lijum
Mon, 2020-06-15 12:12
Normal topic Ways to improve both docking2 and symmetric_docking jobs
by AdoCbl » Wed, 2015-09-23 14:43
0
1,906 by AdoCbl
Wed, 2015-09-23 15:35
Normal topic Multiple antibody jobs failed
by larae » Mon, 2022-09-12 09:54
0
503 by larae
Mon, 2022-09-12 09:54
Normal topic Ligand Docking Protocol now available for academic users
by Sergey » Sat, 2014-05-10 14:39
0
2,359 by Sergey
Sat, 2014-05-10 14:39
Normal topic Sequence Tolerance broken links?
by dnamkr » Fri, 2021-10-22 11:34
0
773 by dnamkr
Fri, 2021-10-22 11:34
Normal topic Rosettadock Error
by jinfeng » Fri, 2022-11-18 20:39
0
780 by jinfeng
Fri, 2022-11-18 20:39
Normal topic farfar2 failed
by Kamonwan » Mon, 2023-01-23 18:41
0
500 by Kamonwan
Mon, 2023-01-23 18:41
Normal topic account does not have verified academic email address
by haria256 » Sat, 2022-07-02 03:33
0
587 by haria256
Sat, 2022-07-02 03:33
Normal topic Antibody Job Failed
by aquilesms89 » Thu, 2020-08-13 08:50
0
1,493 by aquilesms89
Thu, 2020-08-13 08:50
Normal topic problem in downloading result from backrub server
by ladimafakher » Sun, 2018-07-01 00:50
0
1,388 by ladimafakher
Sun, 2018-07-01 00:50
Normal topic Ligand Binding
by KS Siddiqui » Thu, 2019-04-25 01:01
0
1,376 by KS Siddiqui
Thu, 2019-04-25 01:01
Normal topic Correctly Formatting a PDB file for analysis of a Zinc Finger Motif
by rslack » Thu, 2022-04-28 18:19
0
595 by rslack
Thu, 2022-04-28 18:38
Normal topic m6A modification on FARFAR2
by uke » Mon, 2023-09-18 04:31
0
449 by uke
Mon, 2023-09-18 04:31
Normal topic Relax application before ROSIE
by mwinn99 » Wed, 2022-05-25 13:23
0
602 by mwinn99
Wed, 2022-05-25 13:23
Normal topic Erraser protocol now open to public
by Sergey » Wed, 2012-10-17 12:38
0
2,286 by Sergey
Mon, 2014-04-21 06:47
Normal topic my status jobs been queued in such longer time
by Atirah » Fri, 2020-04-10 02:55
0
1,591 by Atirah
Fri, 2020-04-10 02:57
Normal topic pKa app is now public!
by Sergey » Mon, 2014-03-10 15:47
0
3,798 by Sergey
Mon, 2014-03-10 15:47
Normal topic Extracting starting coordinates from ligand docking output
by rgb6@le.ac.uk » Wed, 2023-03-08 02:03
0
584 by rgb6@le.ac.uk
Wed, 2023-03-08 02:03
Normal topic Academic email recognition
by SamyC » Fri, 2024-03-15 08:57
0
40 by SamyC
Fri, 2024-03-15 08:57
Normal topic I have jobs queued for nearly 1 month
by jessye » Thu, 2019-10-10 03:36
0
1,441 by jessye
Thu, 2019-10-10 03:36
Normal topic Academic email verification
by Yair Tenorio » Mon, 2023-10-23 12:18
0
402 by Yair Tenorio
Mon, 2023-10-23 12:18
Normal topic getting right protonation state from PKa of Rosie
by hajar » Fri, 2020-07-24 16:24
0
1,208 by hajar
Fri, 2020-07-24 16:24
Normal topic ROSIE ANTIBODY GRAFTING
by izzafajriani » Sat, 2023-02-25 01:28
0
516 by izzafajriani
Sat, 2023-02-25 01:28
Normal topic Problem with ROSIE antibody modeling
by wildchipiron » Thu, 2016-04-14 20:00
0
1,908 by wildchipiron
Thu, 2016-04-14 20:00
Normal topic Verification
by davelansing » Wed, 2023-07-05 12:09
0
281 by davelansing
Wed, 2023-07-05 12:10
Normal topic FARFAR2 - Extra Minimize Hangs on Submittal
by jvogt » Thu, 2022-06-16 09:41
0
602 by jvogt
Thu, 2022-06-16 09:41
Normal topic Questions about SnugDock result analysis
by LTJ » Thu, 2020-07-02 17:41
0
1,359 by LTJ
Thu, 2020-07-02 17:41
Normal topic Rosetta processes crashed
by izzafajriani » Thu, 2023-02-23 15:35
0
534 by izzafajriani
Thu, 2023-02-23 15:35
Normal topic Ways to improve ROSIE docking2 jobs
by AdoCbl » Wed, 2015-09-23 15:12
0
1,815 by AdoCbl
Wed, 2015-09-23 15:12
Normal topic Rosetta-Vienna RNP-ddG failed
by Athena Chu » Mon, 2022-04-18 18:21
0
603 by Athena Chu
Mon, 2022-04-18 18:21
Normal topic Error of non standard amino acid (SnugDock)
by bt13d072 » Wed, 2017-03-01 19:51
1
2,802 by rmoretti
Mon, 2017-03-06 09:14
Normal topic Academic domains list
by aozalevsky » Tue, 2022-05-24 09:24
1
826 by rmoretti
Wed, 2022-05-25 08:25
Normal topic Modeling Antibody Structure failed
by Sunyp_IM » Sun, 2017-08-06 02:59
1
2,555 by rmoretti
Mon, 2017-08-14 15:09
Normal topic Access to GitHub Denied
by Lucia_G » Wed, 2023-01-25 07:13
1
594 by Sergey
Mon, 2023-01-30 12:29
Normal topic "in_progress" decoy files in some docking2 local_docking job tar archives
by AdoCbl » Sun, 2015-10-18 13:47
1
2,887 by rmoretti
Sun, 2015-10-18 13:59
Normal topic academic email
by rhn » Wed, 2022-08-17 12:44
1
725 by Sergey
Thu, 2022-08-18 13:34
Normal topic Academic email verification
by Claretita » Thu, 2024-01-25 08:38
1
169 by Sergey
Thu, 2024-01-25 13:14
Normal topic farfar2 not submitting jobs
by santos » Thu, 2023-03-02 05:07
1
660 by everyday847
Thu, 2023-03-02 07:51
Normal topic Academic verification
by hkabj77 » Wed, 2023-06-28 00:35
1
376 by Sergey
Thu, 2023-06-29 11:23
Normal topic Academic adress
by ErikRihtar » Sat, 2022-10-01 08:39
1
704 by Sergey
Mon, 2022-10-03 13:49
Normal topic Academic email recognition
by acandayan » Fri, 2024-03-01 06:22
1
118 by Sergey
Mon, 2024-03-04 10:34
Normal topic error in peptiderive job result
by PRITAM » Wed, 2019-05-08 09:33
1
1,914 by rmoretti
Mon, 2019-06-24 12:30
Normal topic antibody modeling fail
by jessye » Tue, 2019-07-02 01:57
1
1,987 by rmoretti
Wed, 2019-07-10 09:09
Normal topic Academic Email Address
by cecii_xy » Tue, 2022-11-08 07:31
1
773 by Sergey
Tue, 2022-11-08 12:34
Normal topic Academic email verification
by victor-calatayud » Mon, 2023-09-18 10:43
1
335 by Sergey
Tue, 2023-09-19 13:34
Normal topic Is there a limitation of RNA length using farfar2?
by lwb » Wed, 2023-01-04 19:09
1
774 by everyday847
Wed, 2023-01-04 19:20
Normal topic Academic address not verified during rosie login
by pomden31 » Thu, 2022-05-26 10:04
1
791 by Sergey
Thu, 2022-05-26 10:21
Normal topic Academic email
by Morteza Ghandadi » Sun, 2022-07-17 00:36
1
773 by rmoretti
Mon, 2022-07-18 06:59
Normal topic Academic email verification
by edgararg » Fri, 2023-11-10 11:03
1
282 by Sergey
Fri, 2023-11-10 11:22
Normal topic Rosie login email verification
by dominiksIZI » Tue, 2023-02-21 06:10
1
578 by Sergey
Tue, 2023-02-21 09:44
Normal topic Academic email verification
by asrivastava1304 » Mon, 2024-02-05 00:35
1
250 by Sergey
Tue, 2024-02-06 13:37
Normal topic ROSIE Queue not loading
by ramon-arg » Mon, 2023-07-31 10:09
1
370 by Sergey
Mon, 2023-07-31 11:45
Normal topic chothia numbering error of FR_L1
by Sbrendle » Mon, 2016-08-22 06:58
1
2,522 by nmarze
Mon, 2016-08-22 11:57
Normal topic Academic address not verified during Rosie login
by schacherl » Fri, 2022-10-07 02:06
1
792 by Sergey
Fri, 2022-10-07 15:28
Normal topic Docking results
by sujigeorge1979 » Wed, 2019-06-12 23:40
1
1,978 by jeliazkov
Mon, 2019-06-17 06:07
Normal topic RMSD - Score
by LT » Thu, 2017-02-23 12:59
1
2,719 by rmoretti
Thu, 2017-02-23 13:03
Normal topic academic institution domain is not listed
by ruma99 » Tue, 2022-05-24 08:33
1
814 by Sergey
Tue, 2022-05-24 10:45
Normal topic RMSD values for symmetric_docking clockwise vs counterclockwise cyclical outputs
by AdoCbl » Sun, 2015-10-18 12:49
1
2,832 by IAndre
Mon, 2015-10-19 01:19
Normal topic Cannot confirm registration to the Rosie site
by fglaser » Sun, 2013-10-13 02:52
1
9,747 by Sergey
Mon, 2014-04-21 06:48
Normal topic email verification of rosie via github
by tenbaegger » Wed, 2024-01-17 17:31
1
196 by Sergey
Mon, 2024-01-22 13:42
Normal topic Problem in refinement job in Docking2
by aninditaseal » Fri, 2016-04-22 07:12
1
2,553 by Sergey
Fri, 2016-04-22 11:13
Normal topic Academic email verification
by KN » Thu, 2024-02-29 00:53
1
89 by Sergey
Thu, 2024-02-29 09:15
Normal topic Support for local install of ROSIE?
by jjv5 » Mon, 2022-03-21 08:58
1
876 by Sergey
Mon, 2022-03-21 12:10
Normal topic Academic verification
by AnaFernandes-CTN » Tue, 2023-05-30 08:57
1
450 by Sergey
Tue, 2023-05-30 11:32
Normal topic RMSD
by jessye » Tue, 2019-07-02 01:54
1
2,575 by rmoretti
Tue, 2019-07-09 09:49
Normal topic Academic email verification
by dianahinojosa » Fri, 2023-10-27 19:17
1
284 by Sergey
Mon, 2023-10-30 11:48
Normal topic Comparing Protein-Protein Docking interactions between WT and mutant proteins
by dflaher » Fri, 2017-11-03 06:18
1
2,508 by rmoretti
Fri, 2017-12-01 11:21
Normal topic Academic Email
by Teo » Tue, 2022-09-06 08:42
1
912 by Sergey
Tue, 2022-09-06 11:10
Normal topic farfar2 error
by debostuti » Thu, 2021-10-07 23:10
1
1,185 by everyday847
Fri, 2021-10-08 10:29
Normal topic Academic email address verification
by whu » Thu, 2023-07-06 09:29
1
408 by Sergey
Fri, 2023-07-07 10:41
Normal topic Academic address not verified during Rosie login
by Jean-Etienne » Thu, 2022-10-06 22:49
1
716 by Sergey
Fri, 2022-10-07 15:26
Normal topic download decoy structures as .tar file?
by deplazes » Fri, 2014-11-21 19:25
1
3,519 by Ashafix
Sat, 2014-11-29 07:00
Normal topic free Energy Calculation?
by Sduenas » Thu, 2015-06-25 12:18
1
4,190 by rmoretti
Fri, 2015-07-03 11:56
Normal topic Academic domain not listed
by SKlab » Fri, 2022-05-20 12:03
1
799 by Sergey
Fri, 2022-05-20 12:14
Normal topic Compaing interface socre of different ligands with the same protein structure
by Caulobacter » Tue, 2019-12-10 12:53
1
1,861 by rmoretti
Tue, 2019-12-10 13:10
Normal topic Rosie Docking Server-Energy function
by jsv » Fri, 2017-07-21 08:26
1
2,331 by ssrb
Fri, 2017-07-21 09:29
Normal topic GitHub authentication for Rosie
by ivmolle » Thu, 2023-01-19 00:21
1
599 by Sergey
Thu, 2023-01-19 13:33
Normal topic Antibody scoring
by larae » Wed, 2022-06-22 11:14
1
788 by rmoretti
Wed, 2022-06-22 12:00
Normal topic Academic email
by ruuua » Wed, 2022-08-03 01:45
1
839 by Sergey
Thu, 2022-08-04 15:58
Normal topic Academic email verification
by ssrn » Tue, 2023-12-12 05:14
1
252 by Sergey
Tue, 2023-12-12 10:52
Normal topic Protein protein docking
by drrahulsuresh » Wed, 2018-05-02 12:52
1
2,415 by smlewis
Thu, 2018-05-03 11:45
Normal topic Failure in local docking
by Fei » Thu, 2014-06-26 12:24
1
3,219 by rmoretti
Tue, 2014-07-01 09:44
Normal topic I am a PhD student in biochemistry at the Institute of Biochemistry and Biophysics (IBB) in Tehran, Iran, but my GitHub accou
by mrabolhasan » Mon, 2024-02-19 22:41
1
139 by rmoretti
Tue, 2024-02-20 06:54
Normal topic Log in to rosie
by dnamkr » Tue, 2022-03-15 11:04
1
968 by Sergey
Tue, 2022-03-15 11:28
Normal topic Bound Ligand Protein-Protein Docking
by ajaniharesh » Mon, 2019-04-08 12:18
1
1,879 by rmoretti
Thu, 2019-05-09 13:38
Normal topic academic verification
by Rita Melo » Fri, 2023-05-26 07:36
1
447 by Sergey
Tue, 2023-05-30 11:31
Normal topic Nanobody prediction using ROSIE ?
by esozdemir » Thu, 2019-06-20 11:14
1
2,157 by rmoretti
Mon, 2019-06-24 12:02
Normal topic Verification via github
by Mirosh » Wed, 2023-08-30 21:15
1
337 by rmoretti
Thu, 2023-08-31 08:50
Normal topic Rosie server stuck??
by David Weis » Sun, 2017-03-05 13:37
1
2,479 by smlewis
Mon, 2017-03-06 08:58
Normal topic Academic domain not listed
by benjv » Wed, 2022-05-25 10:31
1
810 by Sergey
Thu, 2022-05-26 10:23
Normal topic Academic email verification
by rpracella » Wed, 2023-10-25 23:39
1
271 by Sergey
Thu, 2023-10-26 14:27
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