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ROSIE - General

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Sticky topic Sticky: ROSIE FAQ
by Sergey » Mon, 2013-04-08 10:41
6
30,815 by G-Jade
Fri, 2020-12-18 22:40
Normal topic Academic email verification
by Yair Tenorio » Mon, 2023-10-23 12:18
0
407 by Yair Tenorio
Mon, 2023-10-23 12:18
Normal topic Results are NOT emailed
by alsayeghkn » Wed, 2022-03-23 08:55
0
589 by alsayeghkn
Wed, 2022-03-23 08:55
Normal topic Cancel / delete Rosie not working
by fglaser » Tue, 2015-07-07 01:14
0
1,915 by fglaser
Tue, 2015-07-07 01:14
Normal topic Transitioning from ROSIE to Rosetta
by AdoCbl » Wed, 2015-09-23 11:49
0
1,879 by AdoCbl
Wed, 2015-09-23 11:49
Normal topic antibody-antigen interface score
by jessye » Sun, 2018-07-01 21:12
0
1,614 by jessye
Sun, 2018-07-01 21:12
Normal topic ROSIE pKa calculation issue
by lijum » Mon, 2020-06-15 12:12
0
1,325 by lijum
Mon, 2020-06-15 12:12
Normal topic Symmetric Docking Protocol
by Sergey » Tue, 2013-10-29 17:33
0
5,615 by Sergey
Mon, 2014-04-21 06:48
Normal topic Multiple antibody jobs failed
by larae » Mon, 2022-09-12 09:54
0
514 by larae
Mon, 2022-09-12 09:54
Normal topic Sequence Tolerance broken links?
by dnamkr » Fri, 2021-10-22 11:34
0
779 by dnamkr
Fri, 2021-10-22 11:34
Normal topic Rosettadock Error
by jinfeng » Fri, 2022-11-18 20:39
0
789 by jinfeng
Fri, 2022-11-18 20:39
Normal topic account does not have verified academic email address
by haria256 » Sat, 2022-07-02 03:33
0
594 by haria256
Sat, 2022-07-02 03:33
Normal topic Ways to improve both docking2 and symmetric_docking jobs
by AdoCbl » Wed, 2015-09-23 14:43
0
1,918 by AdoCbl
Wed, 2015-09-23 15:35
Normal topic farfar2 failed
by Kamonwan » Mon, 2023-01-23 18:41
0
517 by Kamonwan
Mon, 2023-01-23 18:41
Normal topic Erraser single-residue protocol now open to public
by Sergey » Thu, 2012-10-25 18:21
0
2,244 by Sergey
Mon, 2014-04-21 06:47
Normal topic Antibody Job Failed
by aquilesms89 » Thu, 2020-08-13 08:50
0
1,498 by aquilesms89
Thu, 2020-08-13 08:50
Normal topic Ligand Docking Protocol now available for academic users
by Sergey » Sat, 2014-05-10 14:39
0
2,364 by Sergey
Sat, 2014-05-10 14:39
Normal topic Correctly Formatting a PDB file for analysis of a Zinc Finger Motif
by rslack » Thu, 2022-04-28 18:19
0
604 by rslack
Thu, 2022-04-28 18:38
Normal topic Relax application before ROSIE
by mwinn99 » Wed, 2022-05-25 13:23
0
609 by mwinn99
Wed, 2022-05-25 13:23
Normal topic problem in downloading result from backrub server
by ladimafakher » Sun, 2018-07-01 00:50
0
1,392 by ladimafakher
Sun, 2018-07-01 00:50
Normal topic my status jobs been queued in such longer time
by Atirah » Fri, 2020-04-10 02:55
0
1,598 by Atirah
Fri, 2020-04-10 02:57
Normal topic Institute for academic email recognition
by CeciliaGG » Tue, 2024-03-26 05:40
0
16 by CeciliaGG
Tue, 2024-03-26 05:40
Normal topic Ligand Binding
by KS Siddiqui » Thu, 2019-04-25 01:01
0
1,380 by KS Siddiqui
Thu, 2019-04-25 01:01
Normal topic Extracting starting coordinates from ligand docking output
by rgb6@le.ac.uk » Wed, 2023-03-08 02:03
0
592 by rgb6@le.ac.uk
Wed, 2023-03-08 02:03
Normal topic Erraser protocol now open to public
by Sergey » Wed, 2012-10-17 12:38
0
2,291 by Sergey
Mon, 2014-04-21 06:47
Normal topic getting right protonation state from PKa of Rosie
by hajar » Fri, 2020-07-24 16:24
0
1,212 by hajar
Fri, 2020-07-24 16:24
Normal topic ROSIE ANTIBODY GRAFTING
by izzafajriani » Sat, 2023-02-25 01:28
0
524 by izzafajriani
Sat, 2023-02-25 01:28
Normal topic pKa app is now public!
by Sergey » Mon, 2014-03-10 15:47
0
3,806 by Sergey
Mon, 2014-03-10 15:47
Normal topic I have jobs queued for nearly 1 month
by jessye » Thu, 2019-10-10 03:36
0
1,451 by jessye
Thu, 2019-10-10 03:36
Normal topic Problem with ROSIE antibody modeling
by wildchipiron » Thu, 2016-04-14 20:00
0
1,915 by wildchipiron
Thu, 2016-04-14 20:00
Normal topic Verification
by davelansing » Wed, 2023-07-05 12:09
0
287 by davelansing
Wed, 2023-07-05 12:10
Normal topic FARFAR2 - Extra Minimize Hangs on Submittal
by jvogt » Thu, 2022-06-16 09:41
0
613 by jvogt
Thu, 2022-06-16 09:41
Normal topic Questions about SnugDock result analysis
by LTJ » Thu, 2020-07-02 17:41
0
1,365 by LTJ
Thu, 2020-07-02 17:41
Normal topic Rosetta processes crashed
by izzafajriani » Thu, 2023-02-23 15:35
0
543 by izzafajriani
Thu, 2023-02-23 15:35
Normal topic m6A modification on FARFAR2
by uke » Mon, 2023-09-18 04:31
0
456 by uke
Mon, 2023-09-18 04:31
Normal topic Rosetta-Vienna RNP-ddG failed
by Athena Chu » Mon, 2022-04-18 18:21
0
610 by Athena Chu
Mon, 2022-04-18 18:21
Normal topic Running ROSIE from terminal
by sc19 » Thu, 2022-07-14 01:09
0
534 by sc19
Thu, 2022-07-14 01:09
Normal topic ROSETTA design affinity optimization
by wentlewi » Mon, 2020-02-03 01:42
0
1,677 by wentlewi
Mon, 2020-02-03 01:42
Normal topic Ways to improve ROSIE docking2 jobs
by AdoCbl » Wed, 2015-09-23 15:12
0
1,822 by AdoCbl
Wed, 2015-09-23 15:12
Normal topic academic email
by rhn » Wed, 2022-08-17 12:44
1
737 by Sergey
Thu, 2022-08-18 13:34
Normal topic Snugdock versus Docking with an ensemble of protein conformations
by MIke Kent » Fri, 2019-03-29 10:07
1
2,054 by jeliazkov
Fri, 2019-03-29 10:34
Normal topic Docking two proteins with interfacing ligand
by luisalles » Tue, 2016-04-05 23:56
1
2,832 by rmoretti
Fri, 2016-04-29 09:27
Normal topic farfar2 not submitting jobs
by santos » Thu, 2023-03-02 05:07
1
672 by everyday847
Thu, 2023-03-02 07:51
Normal topic Academic verification
by hkabj77 » Wed, 2023-06-28 00:35
1
385 by Sergey
Thu, 2023-06-29 11:23
Normal topic Academic adress
by ErikRihtar » Sat, 2022-10-01 08:39
1
713 by Sergey
Mon, 2022-10-03 13:49
Normal topic Rosie vip function fails on multiple tries
by Amy F » Sat, 2019-06-15 12:51
1
1,889 by rmoretti
Mon, 2019-06-24 12:20
Normal topic Rosetta Antibody
by Maryam_tabasinezhad » Sun, 2016-08-28 00:29
1
2,738 by smlewis
Sun, 2016-08-28 12:04
Normal topic Error of non standard amino acid (SnugDock)
by bt13d072 » Wed, 2017-03-01 19:51
1
2,820 by rmoretti
Mon, 2017-03-06 09:14
Normal topic Academic email verification
by ssrn » Tue, 2023-12-12 05:14
1
266 by Sergey
Tue, 2023-12-12 10:52
Normal topic Academic Email Address
by cecii_xy » Tue, 2022-11-08 07:31
1
781 by Sergey
Tue, 2022-11-08 12:34
Normal topic Modeling Antibody Structure failed
by Sunyp_IM » Sun, 2017-08-06 02:59
1
2,561 by rmoretti
Mon, 2017-08-14 15:09
Normal topic I am a PhD student in biochemistry at the Institute of Biochemistry and Biophysics (IBB) in Tehran, Iran, but my GitHub accou
by mrabolhasan » Mon, 2024-02-19 22:41
1
158 by rmoretti
Tue, 2024-02-20 06:54
Normal topic Is there a limitation of RNA length using farfar2?
by lwb » Wed, 2023-01-04 19:09
1
787 by everyday847
Wed, 2023-01-04 19:20
Normal topic Academic address not verified during rosie login
by pomden31 » Thu, 2022-05-26 10:04
1
802 by Sergey
Thu, 2022-05-26 10:21
Normal topic Academic email
by Morteza Ghandadi » Sun, 2022-07-17 00:36
1
784 by rmoretti
Mon, 2022-07-18 06:59
Normal topic "in_progress" decoy files in some docking2 local_docking job tar archives
by AdoCbl » Sun, 2015-10-18 13:47
1
2,903 by rmoretti
Sun, 2015-10-18 13:59
Normal topic Rosie login email verification
by dominiksIZI » Tue, 2023-02-21 06:10
1
591 by Sergey
Tue, 2023-02-21 09:44
Normal topic error in peptiderive job result
by PRITAM » Wed, 2019-05-08 09:33
1
1,928 by rmoretti
Mon, 2019-06-24 12:30
Normal topic Academic email verification
by rpracella » Wed, 2023-10-25 23:39
1
277 by Sergey
Thu, 2023-10-26 14:27
Normal topic ROSIE Queue not loading
by ramon-arg » Mon, 2023-07-31 10:09
1
382 by Sergey
Mon, 2023-07-31 11:45
Normal topic Academic address not verified during Rosie login
by schacherl » Fri, 2022-10-07 02:06
1
803 by Sergey
Fri, 2022-10-07 15:28
Normal topic antibody modeling fail
by jessye » Tue, 2019-07-02 01:57
1
1,998 by rmoretti
Wed, 2019-07-10 09:09
Normal topic Academic Email Verification
by charbel.raad@ra... » Tue, 2024-01-30 05:05
1
185 by Sergey
Tue, 2024-01-30 11:04
Normal topic academic institution domain is not listed
by ruma99 » Tue, 2022-05-24 08:33
1
825 by Sergey
Tue, 2022-05-24 10:45
Normal topic academic email verification
by SamyC » Fri, 2024-03-08 08:30
1
104 by SamyC
Sat, 2024-03-09 01:56
Normal topic Academic email verification
by john2 » Tue, 2023-10-17 11:41
1
295 by Sergey
Tue, 2023-10-17 13:13
Normal topic Academic verification
by AnaFernandes-CTN » Tue, 2023-05-30 08:57
1
462 by Sergey
Tue, 2023-05-30 11:32
Normal topic Docking results
by sujigeorge1979 » Wed, 2019-06-12 23:40
1
1,995 by jeliazkov
Mon, 2019-06-17 06:07
Normal topic Support for local install of ROSIE?
by jjv5 » Mon, 2022-03-21 08:58
1
887 by Sergey
Mon, 2022-03-21 12:10
Normal topic chothia numbering error of FR_L1
by Sbrendle » Mon, 2016-08-22 06:58
1
2,529 by nmarze
Mon, 2016-08-22 11:57
Normal topic RMSD - Score
by LT » Thu, 2017-02-23 12:59
1
2,728 by rmoretti
Thu, 2017-02-23 13:03
Normal topic RMSD values for symmetric_docking clockwise vs counterclockwise cyclical outputs
by AdoCbl » Sun, 2015-10-18 12:49
1
2,844 by IAndre
Mon, 2015-10-19 01:19
Normal topic Cannot confirm registration to the Rosie site
by fglaser » Sun, 2013-10-13 02:52
1
9,763 by Sergey
Mon, 2014-04-21 06:48
Normal topic Academic Email
by Teo » Tue, 2022-09-06 08:42
1
924 by Sergey
Tue, 2022-09-06 11:10
Normal topic farfar2 error
by debostuti » Thu, 2021-10-07 23:10
1
1,193 by everyday847
Fri, 2021-10-08 10:29
Normal topic Problem in refinement job in Docking2
by aninditaseal » Fri, 2016-04-22 07:12
1
2,560 by Sergey
Fri, 2016-04-22 11:13
Normal topic Academic email address verification
by whu » Thu, 2023-07-06 09:29
1
422 by Sergey
Fri, 2023-07-07 10:41
Normal topic Academic address not verified during Rosie login
by Jean-Etienne » Thu, 2022-10-06 22:49
1
727 by Sergey
Fri, 2022-10-07 15:26
Normal topic RMSD
by jessye » Tue, 2019-07-02 01:54
1
2,597 by rmoretti
Tue, 2019-07-09 09:49
Normal topic Academic email verification
by Claretita » Thu, 2024-01-25 08:38
1
179 by Sergey
Thu, 2024-01-25 13:14
Normal topic Academic domain not listed
by SKlab » Fri, 2022-05-20 12:03
1
814 by Sergey
Fri, 2022-05-20 12:14
Normal topic Antibody scoring
by larae » Wed, 2022-06-22 11:14
1
805 by rmoretti
Wed, 2022-06-22 12:00
Normal topic Comparing Protein-Protein Docking interactions between WT and mutant proteins
by dflaher » Fri, 2017-11-03 06:18
1
2,522 by rmoretti
Fri, 2017-12-01 11:21
Normal topic Compaing interface socre of different ligands with the same protein structure
by Caulobacter » Tue, 2019-12-10 12:53
1
1,867 by rmoretti
Tue, 2019-12-10 13:10
Normal topic Academic email recognition
by acandayan » Fri, 2024-03-01 06:22
1
144 by Sergey
Mon, 2024-03-04 10:34
Normal topic GitHub authentication for Rosie
by ivmolle » Thu, 2023-01-19 00:21
1
610 by Sergey
Thu, 2023-01-19 13:33
Normal topic Academic email
by ruuua » Wed, 2022-08-03 01:45
1
852 by Sergey
Thu, 2022-08-04 15:58
Normal topic Academic email verification
by victor-calatayud » Mon, 2023-09-18 10:43
1
346 by Sergey
Tue, 2023-09-19 13:34
Normal topic academic verification
by Rita Melo » Fri, 2023-05-26 07:36
1
457 by Sergey
Tue, 2023-05-30 11:31
Normal topic download decoy structures as .tar file?
by deplazes » Fri, 2014-11-21 19:25
1
3,528 by Ashafix
Sat, 2014-11-29 07:00
Normal topic Log in to rosie
by dnamkr » Tue, 2022-03-15 11:04
1
979 by Sergey
Tue, 2022-03-15 11:28
Normal topic Academic email verification
by edgararg » Fri, 2023-11-10 11:03
1
293 by Sergey
Fri, 2023-11-10 11:22
Normal topic Verification via github
by Mirosh » Wed, 2023-08-30 21:15
1
347 by rmoretti
Thu, 2023-08-31 08:50
Normal topic free Energy Calculation?
by Sduenas » Thu, 2015-06-25 12:18
1
4,201 by rmoretti
Fri, 2015-07-03 11:56
Normal topic Rosie Docking Server-Energy function
by jsv » Fri, 2017-07-21 08:26
1
2,342 by ssrb
Fri, 2017-07-21 09:29
Normal topic Academic email verification
by asrivastava1304 » Mon, 2024-02-05 00:35
1
263 by Sergey
Tue, 2024-02-06 13:37
Normal topic Academic domain not listed
by benjv » Wed, 2022-05-25 10:31
1
821 by Sergey
Thu, 2022-05-26 10:23
Normal topic Protein protein docking
by drrahulsuresh » Wed, 2018-05-02 12:52
1
2,424 by smlewis
Thu, 2018-05-03 11:45
Normal topic Academic email recognition
by Anne Poupon » Mon, 2024-03-25 03:44
1
27 by Sergey
Tue, 2024-03-26 10:24
Normal topic Login using GitHub
by nicotomasini » Mon, 2023-01-30 09:14
1
653 by Sergey
Mon, 2023-01-30 12:32
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