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ROSIE FAQ by Sergey » Mon, 2013-04-08 10:41 |
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29,960 |
by G-Jade Fri, 2020-12-18 22:40 |
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problem in downloading result from backrub server by ladimafakher » Sun, 2018-07-01 00:50 |
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1,272 |
by ladimafakher Sun, 2018-07-01 00:50 |
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Ligand Binding by KS Siddiqui » Thu, 2019-04-25 01:01 |
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1,258 |
by KS Siddiqui Thu, 2019-04-25 01:01 |
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Verification by davelansing » Wed, 2023-07-05 12:09 |
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116 |
by davelansing Wed, 2023-07-05 12:10 |
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FARFAR2 - Extra Minimize Hangs on Submittal by jvogt » Thu, 2022-06-16 09:41 |
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437 |
by jvogt Thu, 2022-06-16 09:41 |
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Erraser protocol now open to public by Sergey » Wed, 2012-10-17 12:38 |
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2,168 |
by Sergey Mon, 2014-04-21 06:47 |
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Questions about SnugDock result analysis by LTJ » Thu, 2020-07-02 17:41 |
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1,189 |
by LTJ Thu, 2020-07-02 17:41 |
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Rosetta processes crashed by izzafajriani » Thu, 2023-02-23 15:35 |
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360 |
by izzafajriani Thu, 2023-02-23 15:35 |
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pKa app is now public! by Sergey » Mon, 2014-03-10 15:47 |
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3,663 |
by Sergey Mon, 2014-03-10 15:47 |
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Rosetta-Vienna RNP-ddG failed by Athena Chu » Mon, 2022-04-18 18:21 |
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438 |
by Athena Chu Mon, 2022-04-18 18:21 |
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Academic e-mail adress verification by Pat21778 » Wed, 2023-08-02 04:11 |
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103 |
by Pat21778 Fri, 2023-08-11 06:08 |
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I have jobs queued for nearly 1 month by jessye » Thu, 2019-10-10 03:36 |
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1,297 |
by jessye Thu, 2019-10-10 03:36 |
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ROSETTA design affinity optimization by wentlewi » Mon, 2020-02-03 01:42 |
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1,467 |
by wentlewi Mon, 2020-02-03 01:42 |
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Running ROSIE from terminal by sc19 » Thu, 2022-07-14 01:09 |
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370 |
by sc19 Thu, 2022-07-14 01:09 |
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Problem with ROSIE antibody modeling by wildchipiron » Thu, 2016-04-14 20:00 |
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1,782 |
by wildchipiron Thu, 2016-04-14 20:00 |
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Results are NOT emailed by alsayeghkn » Wed, 2022-03-23 08:55 |
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426 |
by alsayeghkn Wed, 2022-03-23 08:55 |
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ROSIE pKa calculation issue by lijum » Mon, 2020-06-15 12:12 |
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1,144 |
by lijum Mon, 2020-06-15 12:12 |
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Multiple antibody jobs failed by larae » Mon, 2022-09-12 09:54 |
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349 |
by larae Mon, 2022-09-12 09:54 |
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Sequence Tolerance broken links? by dnamkr » Fri, 2021-10-22 11:34 |
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626 |
by dnamkr Fri, 2021-10-22 11:34 |
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Rosettadock Error by jinfeng » Fri, 2022-11-18 20:39 |
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608 |
by jinfeng Fri, 2022-11-18 20:39 |
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farfar2 failed by Kamonwan » Mon, 2023-01-23 18:41 |
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297 |
by Kamonwan Mon, 2023-01-23 18:41 |
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account does not have verified academic email address by haria256 » Sat, 2022-07-02 03:33 |
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420 |
by haria256 Sat, 2022-07-02 03:33 |
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Antibody Job Failed by aquilesms89 » Thu, 2020-08-13 08:50 |
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1,331 |
by aquilesms89 Thu, 2020-08-13 08:50 |
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Ways to improve ROSIE docking2 jobs by AdoCbl » Wed, 2015-09-23 15:12 |
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1,716 |
by AdoCbl Wed, 2015-09-23 15:12 |
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Correctly Formatting a PDB file for analysis of a Zinc Finger Motif by rslack » Thu, 2022-04-28 18:19 |
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439 |
by rslack Thu, 2022-04-28 18:38 |
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Cancel / delete Rosie not working by fglaser » Tue, 2015-07-07 01:14 |
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1,793 |
by fglaser Tue, 2015-07-07 01:14 |
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Relax application before ROSIE by mwinn99 » Wed, 2022-05-25 13:23 |
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446 |
by mwinn99 Wed, 2022-05-25 13:23 |
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m6A modification on FARFAR2 by uke » Mon, 2023-09-18 04:31 |
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30 |
by uke Mon, 2023-09-18 04:31 |
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my status jobs been queued in such longer time by Atirah » Fri, 2020-04-10 02:55 |
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1,420 |
by Atirah Fri, 2020-04-10 02:57 |
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Transitioning from ROSIE to Rosetta by AdoCbl » Wed, 2015-09-23 11:49 |
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1,743 |
by AdoCbl Wed, 2015-09-23 11:49 |
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Symmetric Docking Protocol by Sergey » Tue, 2013-10-29 17:33 |
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5,496 |
by Sergey Mon, 2014-04-21 06:48 |
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antibody-antigen interface score by jessye » Sun, 2018-07-01 21:12 |
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1,497 |
by jessye Sun, 2018-07-01 21:12 |
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Extracting starting coordinates from ligand docking output by rgb6@le.ac.uk » Wed, 2023-03-08 02:03 |
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398 |
by rgb6@le.ac.uk Wed, 2023-03-08 02:03 |
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Erraser single-residue protocol now open to public by Sergey » Thu, 2012-10-25 18:21 |
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2,131 |
by Sergey Mon, 2014-04-21 06:47 |
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getting right protonation state from PKa of Rosie by hajar » Fri, 2020-07-24 16:24 |
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1,048 |
by hajar Fri, 2020-07-24 16:24 |
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ROSIE ANTIBODY GRAFTING by izzafajriani » Sat, 2023-02-25 01:28 |
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358 |
by izzafajriani Sat, 2023-02-25 01:28 |
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Ways to improve both docking2 and symmetric_docking jobs by AdoCbl » Wed, 2015-09-23 14:43 |
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1,790 |
by AdoCbl Wed, 2015-09-23 15:35 |
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Ligand Docking Protocol now available for academic users by Sergey » Sat, 2014-05-10 14:39 |
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2,252 |
by Sergey Sat, 2014-05-10 14:39 |
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chothia numbering error of FR_L1 by Sbrendle » Mon, 2016-08-22 06:58 |
1 |
2,335 |
by nmarze Mon, 2016-08-22 11:57 |
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Docking results by sujigeorge1979 » Wed, 2019-06-12 23:40 |
1 |
1,786 |
by jeliazkov Mon, 2019-06-17 06:07 |
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Verification via github by Mirosh » Wed, 2023-08-30 21:15 |
1 |
75 |
by rmoretti Thu, 2023-08-31 08:50 |
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RMSD - Score by LT » Thu, 2017-02-23 12:59 |
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2,520 |
by rmoretti Thu, 2017-02-23 13:03 |
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Academic domain not listed by benjv » Wed, 2022-05-25 10:31 |
1 |
596 |
by Sergey Thu, 2022-05-26 10:23 |
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Login using GitHub by nicotomasini » Mon, 2023-01-30 09:14 |
1 |
409 |
by Sergey Mon, 2023-01-30 12:32 |
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Cannot confirm registration to the Rosie site by fglaser » Sun, 2013-10-13 02:52 |
1 |
9,589 |
by Sergey Mon, 2014-04-21 06:48 |
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Small molecule ligand docking in RosettaDock-4.0 by hicks139 » Thu, 2023-03-02 09:35 |
1 |
478 |
by rmoretti Thu, 2023-03-02 09:37 |
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RMSD values for symmetric_docking clockwise vs counterclockwise cyclical outputs by AdoCbl » Sun, 2015-10-18 12:49 |
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2,659 |
by IAndre Mon, 2015-10-19 01:19 |
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Problem in refinement job in Docking2 by aninditaseal » Fri, 2016-04-22 07:12 |
1 |
2,374 |
by Sergey Fri, 2016-04-22 11:13 |
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Academic E-mail address by Valery Veresov » Wed, 2022-10-05 05:43 |
1 |
466 |
by rmoretti Thu, 2022-10-06 09:18 |
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Antibody job failed by larae » Fri, 2022-03-25 11:04 |
1 |
640 |
by rmoretti Tue, 2022-03-29 15:14 |
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Academic Email Adress by Konstantin » Sat, 2022-11-12 02:06 |
1 |
542 |
by rmoretti Mon, 2022-11-14 07:21 |
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academic institution domain is not listed by minzhi » Mon, 2022-05-16 14:26 |
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605 |
by Sergey Wed, 2022-05-18 14:05 |
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RMSD by jessye » Tue, 2019-07-02 01:54 |
1 |
2,294 |
by rmoretti Tue, 2019-07-09 09:49 |
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Access to Rosie via GitHub Authentication by Prizrak5 » Thu, 2023-01-05 01:38 |
1 |
459 |
by Sergey Thu, 2023-01-05 14:26 |
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Comparing Protein-Protein Docking interactions between WT and mutant proteins by dflaher » Fri, 2017-11-03 06:18 |
1 |
2,342 |
by rmoretti Fri, 2017-12-01 11:21 |
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Academic email by Timothius » Sun, 2022-07-24 15:51 |
1 |
532 |
by Sergey Thu, 2022-07-28 14:28 |
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academic_address by Natalia » Fri, 2022-09-16 12:27 |
1 |
433 |
by rmoretti Fri, 2022-09-16 13:50 |
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ddG_RNA final energy different when modeling WT sequence by AlexLukasiewicz » Tue, 2022-01-25 14:41 |
1 |
708 |
by Ajlukasiewicz Fri, 2022-09-09 12:24 |
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download decoy structures as .tar file? by deplazes » Fri, 2014-11-21 19:25 |
1 |
3,342 |
by Ashafix Sat, 2014-11-29 07:00 |
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free Energy Calculation? by Sduenas » Thu, 2015-06-25 12:18 |
1 |
3,875 |
by rmoretti Fri, 2015-07-03 11:56 |
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Academic domains list by aozalevsky » Tue, 2022-05-24 09:24 |
1 |
584 |
by rmoretti Wed, 2022-05-25 08:25 |
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Rosie Docking Server-Energy function by jsv » Fri, 2017-07-21 08:26 |
1 |
2,158 |
by ssrb Fri, 2017-07-21 09:29 |
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Access to GitHub Denied by Lucia_G » Wed, 2023-01-25 07:13 |
1 |
352 |
by Sergey Mon, 2023-01-30 12:29 |
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Protein protein docking by drrahulsuresh » Wed, 2018-05-02 12:52 |
1 |
2,237 |
by smlewis Thu, 2018-05-03 11:45 |
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farfar2 not submitting jobs by santos » Thu, 2023-03-02 05:07 |
1 |
425 |
by everyday847 Thu, 2023-03-02 07:51 |
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academic email by rhn » Wed, 2022-08-17 12:44 |
1 |
474 |
by Sergey Thu, 2022-08-18 13:34 |
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Academic adress by ErikRihtar » Sat, 2022-10-01 08:39 |
1 |
453 |
by Sergey Mon, 2022-10-03 13:49 |
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Failure in local docking by Fei » Thu, 2014-06-26 12:24 |
1 |
3,053 |
by rmoretti Tue, 2014-07-01 09:44 |
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Bound Ligand Protein-Protein Docking by ajaniharesh » Mon, 2019-04-08 12:18 |
1 |
1,711 |
by rmoretti Thu, 2019-05-09 13:38 |
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Academic verification by hkabj77 » Wed, 2023-06-28 00:35 |
1 |
149 |
by Sergey Thu, 2023-06-29 11:23 |
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Academic Email Address by cecii_xy » Tue, 2022-11-08 07:31 |
1 |
546 |
by Sergey Tue, 2022-11-08 12:34 |
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Nanobody prediction using ROSIE ? by esozdemir » Thu, 2019-06-20 11:14 |
1 |
1,903 |
by rmoretti Mon, 2019-06-24 12:02 |
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Rosie server stuck?? by David Weis » Sun, 2017-03-05 13:37 |
1 |
2,304 |
by smlewis Mon, 2017-03-06 08:58 |
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Is there a limitation of RNA length using farfar2? by lwb » Wed, 2023-01-04 19:09 |
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482 |
by everyday847 Wed, 2023-01-04 19:20 |
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Academic address not verified during rosie login by pomden31 » Thu, 2022-05-26 10:04 |
1 |
578 |
by Sergey Thu, 2022-05-26 10:21 |
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Academic email verification by victor-calatayud » Mon, 2023-09-18 10:43 |
1 |
31 |
by Sergey Tue, 2023-09-19 13:34 |
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Deleting ones "own" guest job a to reduce server load by Protein fan » Thu, 2017-10-26 01:26 |
1 |
2,263 |
by rmoretti Fri, 2017-12-01 11:24 |
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Rosie login email verification by dominiksIZI » Tue, 2023-02-21 06:10 |
1 |
337 |
by Sergey Tue, 2023-02-21 09:44 |
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Let docking2 jobs list the scores for the input proteins.pdb file by AdoCbl » Wed, 2015-09-23 12:24 |
1 |
2,647 |
by AdoCbl Thu, 2015-09-24 11:38 |
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Academic email by Morteza Ghandadi » Sun, 2022-07-17 00:36 |
1 |
533 |
by rmoretti Mon, 2022-07-18 06:59 |
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SNUGDOCK by harsh » Tue, 2018-10-09 23:58 |
1 |
2,036 |
by Sergey Tue, 2018-10-16 15:52 |
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ROSIE antibody modeling- discontinuity in backbone by wagnerek » Tue, 2015-10-27 10:18 |
1 |
2,633 |
by rmoretti Wed, 2015-11-25 12:53 |
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Academic address not verified during Rosie login by schacherl » Fri, 2022-10-07 02:06 |
1 |
561 |
by Sergey Fri, 2022-10-07 15:28 |
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missing residues while Rosie Modeling by jguan » Mon, 2014-08-11 06:56 |
1 |
4,253 |
by jadolfbr Tue, 2014-10-21 08:46 |
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SnugDocking result interpretation by jessye » Mon, 2019-05-27 03:43 |
1 |
1,803 |
by jeliazkov Tue, 2019-05-28 13:36 |
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ROSIE Queue not loading by ramon-arg » Mon, 2023-07-31 10:09 |
1 |
123 |
by Sergey Mon, 2023-07-31 11:45 |
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FARFAR2 structure prediction give a circular RNA by jitz » Thu, 2019-07-25 04:58 |
1 |
1,949 |
by everyday847 Mon, 2019-11-11 14:39 |
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Prepack step fail in docking2 by gretahultqvist » Thu, 2015-06-11 00:20 |
1 |
3,023 |
by rmoretti Fri, 2015-07-03 12:14 |
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academic institution domain is not listed by ruma99 » Tue, 2022-05-24 08:33 |
1 |
591 |
by Sergey Tue, 2022-05-24 10:45 |
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SNUGDOCK by adva » Sun, 2017-07-16 00:46 |
1 |
2,049 |
by rmoretti Mon, 2017-07-17 07:57 |
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Beta-Peptide Design Protocol now available for academic users by Sergey » Wed, 2012-11-28 12:32 |
1 |
7,311 |
by jaw315 Thu, 2022-06-09 10:26 |
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SnugDock: chain_id H represents more than one chain by tweetman » Wed, 2018-05-02 04:24 |
1 |
2,440 |
by sheehajh Wed, 2018-05-02 06:38 |
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Docking two proteins with interfacing ligand by luisalles » Tue, 2016-04-05 23:56 |
1 |
2,624 |
by rmoretti Fri, 2016-04-29 09:27 |
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Support for local install of ROSIE? by jjv5 » Mon, 2022-03-21 08:58 |
1 |
637 |
by Sergey Mon, 2022-03-21 12:10 |
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Snugdock versus Docking with an ensemble of protein conformations by MIke Kent » Fri, 2019-03-29 10:07 |
1 |
1,856 |
by jeliazkov Fri, 2019-03-29 10:34 |
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Academic verification by AnaFernandes-CTN » Tue, 2023-05-30 08:57 |
1 |
217 |
by Sergey Tue, 2023-05-30 11:32 |
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Rosetta Antibody by Maryam_tabasinezhad » Sun, 2016-08-28 00:29 |
1 |
2,557 |
by smlewis Sun, 2016-08-28 12:04 |
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Rosie vip function fails on multiple tries by Amy F » Sat, 2019-06-15 12:51 |
1 |
1,688 |
by rmoretti Mon, 2019-06-24 12:20 |
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Error of non standard amino acid (SnugDock) by bt13d072 » Wed, 2017-03-01 19:51 |
1 |
2,626 |
by rmoretti Mon, 2017-03-06 09:14 |
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Modeling Antibody Structure failed by Sunyp_IM » Sun, 2017-08-06 02:59 |
1 |
2,371 |
by rmoretti Mon, 2017-08-14 15:09 |
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