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ROSIE - General

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Sticky topic Sticky: ROSIE FAQ
by Sergey » Mon, 2013-04-08 10:41
6
28,288 by G-Jade
Fri, 2020-12-18 22:40
Normal topic Multiple antibody jobs failed
by larae » Mon, 2022-09-12 09:54
0
133 by larae
Mon, 2022-09-12 09:54
Normal topic Running ROSIE from terminal
by sc19 » Thu, 2022-07-14 01:09
0
161 by sc19
Thu, 2022-07-14 01:09
Normal topic academic_address
by Natalia » Fri, 2022-09-16 12:27
1
162 by rmoretti
Fri, 2022-09-16 13:50
Normal topic Academic adress
by ErikRihtar » Sat, 2022-10-01 08:39
1
162 by Sergey
Mon, 2022-10-03 13:49
Normal topic Academic address not verified during Rosie login
by Jean-Etienne » Thu, 2022-10-06 22:49
1
178 by Sergey
Fri, 2022-10-07 15:26
Normal topic Academic address
by almeida85 » Mon, 2022-09-26 07:25
2
181 by almeida85
Thu, 2022-09-29 00:10
Normal topic Academic Email
by Teo » Tue, 2022-09-06 08:42
1
182 by Sergey
Tue, 2022-09-06 11:10
Normal topic Academic E-mail address
by Valery Veresov » Wed, 2022-10-05 05:43
1
186 by rmoretti
Thu, 2022-10-06 09:18
Normal topic Rosettadock Error
by jinfeng » Fri, 2022-11-18 20:39
0
191 by jinfeng
Fri, 2022-11-18 20:39
Normal topic academic email
by rhn » Wed, 2022-08-17 12:44
1
196 by Sergey
Thu, 2022-08-18 13:34
Normal topic FARFAR2 - Extra Minimize Hangs on Submittal
by jvogt » Thu, 2022-06-16 09:41
0
199 by jvogt
Thu, 2022-06-16 09:41
Normal topic RosettaDock output
by taeyoungahn » Wed, 2022-11-23 17:04
2
200 by taeyoungahn
Sun, 2022-11-27 20:12
Normal topic account does not have verified academic email address
by haria256 » Sat, 2022-07-02 03:33
0
202 by haria256
Sat, 2022-07-02 03:33
Normal topic 504 Gateway Time-out
by larae » Wed, 2022-08-31 03:38
2
216 by Sergey
Wed, 2022-08-31 09:12
Normal topic Rosetta-Vienna RNP-ddG failed
by Athena Chu » Mon, 2022-04-18 18:21
0
218 by Athena Chu
Mon, 2022-04-18 18:21
Normal topic Relax application before ROSIE
by mwinn99 » Wed, 2022-05-25 13:23
0
221 by mwinn99
Wed, 2022-05-25 13:23
Normal topic Correctly Formatting a PDB file for analysis of a Zinc Finger Motif
by rslack » Thu, 2022-04-28 18:19
0
222 by rslack
Thu, 2022-04-28 18:38
Normal topic Academic Email Adress
by Konstantin » Sat, 2022-11-12 02:06
1
225 by rmoretti
Mon, 2022-11-14 07:21
Normal topic Results are NOT emailed
by alsayeghkn » Wed, 2022-03-23 08:55
0
232 by alsayeghkn
Wed, 2022-03-23 08:55
Normal topic Academic Email Address
by cecii_xy » Tue, 2022-11-08 07:31
1
236 by Sergey
Tue, 2022-11-08 12:34
Normal topic Academic email
by Morteza Ghandadi » Sun, 2022-07-17 00:36
1
240 by rmoretti
Mon, 2022-07-18 06:59
Normal topic Academic address not verified during Rosie login
by schacherl » Fri, 2022-10-07 02:06
1
246 by Sergey
Fri, 2022-10-07 15:28
Normal topic Academic email address verification
by bozturk » Wed, 2022-11-02 06:01
2
251 by bozturk
Thu, 2022-11-03 00:14
Normal topic Academic email adress
by StephanieAgu » Mon, 2022-11-14 23:54
2
252 by StephanieAgu
Wed, 2022-11-16 05:19
Normal topic Antibody scoring
by larae » Wed, 2022-06-22 11:14
1
260 by rmoretti
Wed, 2022-06-22 12:00
Normal topic 502 Bad Gateway
by lijunnju » Fri, 2022-10-21 12:58
3
261 by Sergey
Mon, 2022-10-24 14:07
Normal topic Academic email
by Timothius » Sun, 2022-07-24 15:51
1
264 by Sergey
Thu, 2022-07-28 14:28
Normal topic Academic address not verified during Rosie login
by oscarpramos » Wed, 2022-10-19 00:31
2
281 by MpupoM
Wed, 2022-11-02 01:35
Normal topic Academic domain not listed
by SKlab » Fri, 2022-05-20 12:03
1
283 by Sergey
Fri, 2022-05-20 12:14
Normal topic Academic address not verified during rosie login
by pomden31 » Thu, 2022-05-26 10:04
1
292 by Sergey
Thu, 2022-05-26 10:21
Normal topic Academic email
by ruuua » Wed, 2022-08-03 01:45
1
294 by Sergey
Thu, 2022-08-04 15:58
Normal topic Academic domains list
by aozalevsky » Tue, 2022-05-24 09:24
1
298 by rmoretti
Wed, 2022-05-25 08:25
Normal topic academic institution domain is not listed
by ruma99 » Tue, 2022-05-24 08:33
1
305 by Sergey
Tue, 2022-05-24 10:45
Normal topic Academic address not verified during rosie login
by s.shankar » Thu, 2022-07-14 09:40
2
306 by s.shankar
Fri, 2022-07-15 12:31
Normal topic Academic domain not listed
by benjv » Wed, 2022-05-25 10:31
1
309 by Sergey
Thu, 2022-05-26 10:23
Normal topic academic institution domain is not listed
by minzhi » Mon, 2022-05-16 14:26
1
317 by Sergey
Wed, 2022-05-18 14:05
Normal topic Ligand docking score.sc file containing more structures than produced
by Delfosse57 » Sat, 2022-07-16 10:44
2
318 by Delfosse57
Mon, 2022-07-18 11:09
Normal topic ROSIE academic email verification
by Yang Xie » Fri, 2022-09-23 06:37
4
330 by Yang Xie
Fri, 2022-09-23 10:09
Normal topic Cannot login ROSIE-2 (docking-3)
by Pdk089 » Mon, 2022-04-25 11:30
1
339 by Sergey
Mon, 2022-04-25 11:48
Normal topic Error Fasta file
by gabrielab » Mon, 2022-08-15 00:41
3
345 by Sergey
Mon, 2022-08-29 12:43
Normal topic Antibody job failed
by larae » Fri, 2022-03-25 11:04
1
346 by rmoretti
Tue, 2022-03-29 15:14
Normal topic Support for local install of ROSIE?
by jjv5 » Mon, 2022-03-21 08:58
1
351 by Sergey
Mon, 2022-03-21 12:10
Normal topic Log in to rosie
by dnamkr » Tue, 2022-03-15 11:04
1
400 by Sergey
Tue, 2022-03-15 11:28
Normal topic Academic domain missing
by yoann.vial » Wed, 2022-04-13 00:20
2
407 by Sergey
Fri, 2022-04-15 10:20
Normal topic ddG_RNA final energy different when modeling WT sequence
by AlexLukasiewicz » Tue, 2022-01-25 14:41
1
413 by Ajlukasiewicz
Fri, 2022-09-09 12:24
Normal topic Sequence Tolerance broken links?
by dnamkr » Fri, 2021-10-22 11:34
0
418 by dnamkr
Fri, 2021-10-22 11:34
Normal topic My academic institution domain is not listed.
by mebigi » Fri, 2022-04-08 07:44
2
432 by mebigi
Mon, 2022-04-11 16:35
Normal topic farfar2 error
by debostuti » Thu, 2021-10-07 23:10
1
584 by everyday847
Fri, 2021-10-08 10:29
Normal topic Academic domain not listed
by larae » Mon, 2022-05-02 02:50
4
607 by SKlab
Mon, 2022-05-16 09:12
Normal topic Stepwise error
by debostuti » Wed, 2021-10-06 08:57
2
619 by debostuti
Fri, 2021-10-08 00:29
Normal topic sequence_tolerance queue stuck
by Fred Muskett » Fri, 2021-09-03 08:08
2
754 by line
Fri, 2022-02-25 00:40
Normal topic getting right protonation state from PKa of Rosie
by hajar » Fri, 2020-07-24 16:24
0
808 by hajar
Fri, 2020-07-24 16:24
Normal topic ROSIE pKa calculation issue
by lijum » Mon, 2020-06-15 12:12
0
910 by lijum
Mon, 2020-06-15 12:12
Normal topic Questions about SnugDock result analysis
by LTJ » Thu, 2020-07-02 17:41
0
937 by LTJ
Thu, 2020-07-02 17:41
Normal topic Ligand Binding
by KS Siddiqui » Thu, 2019-04-25 01:01
0
1,030 by KS Siddiqui
Thu, 2019-04-25 01:01
Normal topic problem in downloading result from backrub server
by ladimafakher » Sun, 2018-07-01 00:50
0
1,058 by ladimafakher
Sun, 2018-07-01 00:50
Normal topic I have jobs queued for nearly 1 month
by jessye » Thu, 2019-10-10 03:36
0
1,060 by jessye
Thu, 2019-10-10 03:36
Normal topic Antibody Job Failed
by aquilesms89 » Thu, 2020-08-13 08:50
0
1,110 by aquilesms89
Thu, 2020-08-13 08:50
Normal topic ROSETTA design affinity optimization
by wentlewi » Mon, 2020-02-03 01:42
0
1,170 by wentlewi
Mon, 2020-02-03 01:42
Normal topic my status jobs been queued in such longer time
by Atirah » Fri, 2020-04-10 02:55
0
1,177 by Atirah
Fri, 2020-04-10 02:57
Normal topic antibody-antigen interface score
by jessye » Sun, 2018-07-01 21:12
0
1,272 by jessye
Sun, 2018-07-01 21:12
Normal topic Compaing interface socre of different ligands with the same protein structure
by Caulobacter » Tue, 2019-12-10 12:53
1
1,303 by rmoretti
Tue, 2019-12-10 13:10
Normal topic Rosie vip function fails on multiple tries
by Amy F » Sat, 2019-06-15 12:51
1
1,366 by rmoretti
Mon, 2019-06-24 12:20
Normal topic Bound Ligand Protein-Protein Docking
by ajaniharesh » Mon, 2019-04-08 12:18
1
1,396 by rmoretti
Thu, 2019-05-09 13:38
Normal topic error in peptiderive job result
by PRITAM » Wed, 2019-05-08 09:33
1
1,400 by rmoretti
Mon, 2019-06-24 12:30
Normal topic Docking results
by sujigeorge1979 » Wed, 2019-06-12 23:40
1
1,450 by jeliazkov
Mon, 2019-06-17 06:07
Normal topic SnugDocking result interpretation
by jessye » Mon, 2019-05-27 03:43
1
1,471 by jeliazkov
Tue, 2019-05-28 13:36
Normal topic antibody modeling fail
by jessye » Tue, 2019-07-02 01:57
1
1,484 by rmoretti
Wed, 2019-07-10 09:09
Normal topic Snugdock versus Docking with an ensemble of protein conformations
by MIke Kent » Fri, 2019-03-29 10:07
1
1,519 by jeliazkov
Fri, 2019-03-29 10:34
Normal topic Nanobody prediction using ROSIE ?
by esozdemir » Thu, 2019-06-20 11:14
1
1,540 by rmoretti
Mon, 2019-06-24 12:02
Normal topic FARFAR2 structure prediction give a circular RNA
by jitz » Thu, 2019-07-25 04:58
1
1,547 by everyday847
Mon, 2019-11-11 14:39
Normal topic Ways to improve ROSIE docking2 jobs
by AdoCbl » Wed, 2015-09-23 15:12
0
1,563 by AdoCbl
Wed, 2015-09-23 15:12
Normal topic Transitioning from ROSIE to Rosetta
by AdoCbl » Wed, 2015-09-23 11:49
0
1,576 by AdoCbl
Wed, 2015-09-23 11:49
Normal topic Ways to improve both docking2 and symmetric_docking jobs
by AdoCbl » Wed, 2015-09-23 14:43
0
1,618 by AdoCbl
Wed, 2015-09-23 15:35
Normal topic Problem with ROSIE antibody modeling
by wildchipiron » Thu, 2016-04-14 20:00
0
1,621 by wildchipiron
Thu, 2016-04-14 20:00
Normal topic Cancel / delete Rosie not working
by fglaser » Tue, 2015-07-07 01:14
0
1,623 by fglaser
Tue, 2015-07-07 01:14
Normal topic SNUGDOCK
by harsh » Tue, 2018-10-09 23:58
1
1,711 by Sergey
Tue, 2018-10-16 15:52
Normal topic SNUGDOCK
by adva » Sun, 2017-07-16 00:46
1
1,766 by rmoretti
Mon, 2017-07-17 07:57
Normal topic RMSD
by jessye » Tue, 2019-07-02 01:54
1
1,817 by rmoretti
Tue, 2019-07-09 09:49
Normal topic Rosie Docking Server-Energy function
by jsv » Fri, 2017-07-21 08:26
1
1,863 by ssrb
Fri, 2017-07-21 09:29
Normal topic Protein protein docking
by drrahulsuresh » Wed, 2018-05-02 12:52
1
1,873 by smlewis
Thu, 2018-05-03 11:45
Normal topic Does Snugdock remodeling of H3 loops include the kink constraint as in RosettaAntibody?
by MIke Kent » Wed, 2019-03-27 10:09
2
1,939 by MIke Kent
Thu, 2019-03-28 11:26
Normal topic Deleting ones "own" guest job a to reduce server load
by Protein fan » Thu, 2017-10-26 01:26
1
1,970 by rmoretti
Fri, 2017-12-01 11:24
Normal topic SnugDock: chain_id H represents more than one chain
by tweetman » Wed, 2018-05-02 04:24
1
1,973 by sheehajh
Wed, 2018-05-02 06:38
Normal topic Erraser single-residue protocol now open to public
by Sergey » Thu, 2012-10-25 18:21
0
1,978 by Sergey
Mon, 2014-04-21 06:47
Normal topic Erraser protocol now open to public
by Sergey » Wed, 2012-10-17 12:38
0
2,006 by Sergey
Mon, 2014-04-21 06:47
Normal topic Rosie server stuck??
by David Weis » Sun, 2017-03-05 13:37
1
2,041 by smlewis
Mon, 2017-03-06 08:58
Normal topic Comparing Protein-Protein Docking interactions between WT and mutant proteins
by dflaher » Fri, 2017-11-03 06:18
1
2,051 by rmoretti
Fri, 2017-12-01 11:21
Normal topic Modeling Antibody Structure failed
by Sunyp_IM » Sun, 2017-08-06 02:59
1
2,085 by rmoretti
Mon, 2017-08-14 15:09
Normal topic FARFAR2 error
by lijunnju » Tue, 2020-02-11 08:09
4
2,090 by pomden31
Tue, 2022-10-04 00:37
Normal topic Ligand Docking Protocol now available for academic users
by Sergey » Sat, 2014-05-10 14:39
0
2,094 by Sergey
Sat, 2014-05-10 14:39
Normal topic chothia numbering error of FR_L1
by Sbrendle » Mon, 2016-08-22 06:58
1
2,132 by nmarze
Mon, 2016-08-22 11:57
Normal topic Problem in refinement job in Docking2
by aninditaseal » Fri, 2016-04-22 07:12
1
2,139 by Sergey
Fri, 2016-04-22 11:13
Normal topic RMSD - Score
by LT » Thu, 2017-02-23 12:59
1
2,253 by rmoretti
Thu, 2017-02-23 13:03
Normal topic Rosetta Antibody
by Maryam_tabasinezhad » Sun, 2016-08-28 00:29
1
2,322 by smlewis
Sun, 2016-08-28 12:04
Normal topic Linear peptide versus cyclic peptide binding prediction
by gabr » Mon, 2019-11-18 12:25
2
2,356 by gabr
Tue, 2019-11-19 13:57
Normal topic Error of non standard amino acid (SnugDock)
by bt13d072 » Wed, 2017-03-01 19:51
1
2,362 by rmoretti
Mon, 2017-03-06 09:14
Normal topic Docking two proteins with interfacing ligand
by luisalles » Tue, 2016-04-05 23:56
1
2,375 by rmoretti
Fri, 2016-04-29 09:27
Normal topic How to run PLOT LHOC on Results from Rosie Server
by sujigeorge1979 » Mon, 2019-06-10 19:32
3
2,405 by jeliazkov
Mon, 2019-06-24 11:49
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