| cached_scores_id_ | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| chunk_coordinates_ | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| fill_coords(core::pose::Pose const &, FArray2_double &, Size, std::string) | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| frag_pos_coordinates_ | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| fragment_coordinates_ | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| fragment_pose_ | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| FragmentAllAtomCrmsd(Size, Real, bool, std::string, core::pose::PoseOP) | protocols::frag_picker::scores::FragmentAllAtomCrmsd | |
| FragmentAllAtomCrmsd(Size, Real, bool, std::string, utility::vector1< utility::vector1< Real > >) | protocols::frag_picker::scores::FragmentAllAtomCrmsd | |
| FragmentScoringMethod(Size priority, Real lowest_acceptable_value, bool use_lowest, std::string name) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_id() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_min_allowed_score() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_priority() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_score_name() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_use_lowest() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| id_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| lowest_acceptable_value_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| name_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| priority_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| query_sequence_ | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| reference_coordinates_ | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| reference_pose_ | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| score(FragmentCandidateOP, FragmentScoreMapOP) | protocols::frag_picker::scores::FragmentAllAtomCrmsd | virtual |
| set_id(Size id) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| set_min_allowed_score(Real lowest_acceptable_value) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| total_ref_resids_ | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| use_lowest_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| weights_ | protocols::frag_picker::scores::FragmentAllAtomCrmsd | private |
| ~FragmentAllAtomCrmsd() | protocols::frag_picker::scores::FragmentAllAtomCrmsd | |
1.8.7