ContinuousAssembly.cc File Reference

#include <protocols/sewing/conformation/ContinuousAssembly.hh>
#include <protocols/sewing/util/io.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/pack/rotamer_set/AddResiduesRotamerSetOperation.hh>
#include <core/scoring/constraints/ResidueTypeConstraint.hh>
#include <core/conformation/Residue.functions.hh>
#include <core/chemical/VariantType.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/Edge.hh>
#include <protocols/loops/Loop.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/sewing.OptionKeys.gen.hh>
#include <numeric/model_quality/rms.hh>
#include <numeric/random/random.hh>
#include <numeric/xyzTransform.hh>
#include <utility/LexicographicalIterator.hh>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::sewing

Functions
static basic::Tracer	protocols::sewing::TR ("protocols.sewing.ContinuousAssembly")

Detailed Description

Author

Tim Jacobs

Doonam Kim (append_model which is independent of number of secondary structure)