accept_new_conformation(core::pose::Pose const &pose, core::id::TorsionID const &torsion_id, core::Angle const alpha) const | protocols::loops::loop_closure::ccd::RamaCheckBase | |
average_change_in_rama_score_over_range(core::pose::Pose const &pose, core::uint const first_res, core::uint const last_res) const | protocols::loops::loop_closure::ccd::RamaCheckBase | |
clone() const | protocols::loops::loop_closure::ccd::RamaCheck1B | virtual |
compute_rama_score(core::pose::Pose const &pose, core::uint const seqpos, core::Real const phi, core::Real const psi) const | protocols::loops::loop_closure::ccd::RamaCheck1B | virtual |
copy_data(RamaCheck1B &to, RamaCheck1B const &from) const | protocols::loops::loop_closure::ccd::RamaCheck1B | private |
initialize_starting_rama_scores(core::pose::Pose const &pose) const | protocols::loops::loop_closure::ccd::RamaCheckBase | |
max_rama_score_increase() const | protocols::loops::loop_closure::ccd::RamaCheckBase | inline |
max_rama_score_increase(core::Real input_max_rama_score_increase) | protocols::loops::loop_closure::ccd::RamaCheckBase | inline |
name() const | protocols::loops::loop_closure::ccd::RamaCheck1B | virtual |
operator=(RamaCheck1B const &object_to_copy) | protocols::loops::loop_closure::ccd::RamaCheck1B | |
protocols::loops::loop_closure::ccd::RamaCheckBase::operator=(RamaCheckBase const &object_to_copy) | protocols::loops::loop_closure::ccd::RamaCheckBase | |
parse_my_tag(utility::tag::TagCOP tag) | protocols::loops::loop_closure::ccd::RamaCheckBase | virtual |
rama_ | protocols::loops::loop_closure::ccd::RamaCheck1B | private |
RamaCheck1B() | protocols::loops::loop_closure::ccd::RamaCheck1B | |
RamaCheck1B(RamaCheck1B const &object_to_copy) | protocols::loops::loop_closure::ccd::RamaCheck1B | |
RamaCheckBase() | protocols::loops::loop_closure::ccd::RamaCheckBase | |
RamaCheckBase(RamaCheckBase const &object_to_copy) | protocols::loops::loop_closure::ccd::RamaCheckBase | |
register_options() | protocols::loops::loop_closure::ccd::RamaCheckBase | static |
show(std::ostream &output=std::cout) const | protocols::loops::loop_closure::ccd::RamaCheckBase | virtual |
temperature() const | protocols::loops::loop_closure::ccd::RamaCheckBase | inline |
temperature(core::Real input_temperature) | protocols::loops::loop_closure::ccd::RamaCheckBase | inline |
total_net_change_in_rama_score_over_range(core::pose::Pose const &pose, core::uint const first_res, core::uint const last_res) const | protocols::loops::loop_closure::ccd::RamaCheckBase | |
~RamaCheck1B() | protocols::loops::loop_closure::ccd::RamaCheck1B | virtual |
~RamaCheckBase() | protocols::loops::loop_closure::ccd::RamaCheckBase | virtual |