sym_atom_tree_minimize.cc File Reference

#include <core/optimization/symmetry/sym_atom_tree_minimize.hh>
#include <core/optimization/types.hh>
#include <core/optimization/Multifunc.hh>
#include <core/optimization/symmetry/SymMinimizerMap.hh>
#include <core/optimization/atom_tree_minimize.hh>
#include <core/pose/symmetry/util.hh>
#include <core/conformation/symmetry/util.hh>
#include <core/conformation/symmetry/SymmetryInfo.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/scoring/EnergyMap.hh>
#include <core/scoring/MinimizationGraph.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/symmetry/SymmetricEnergies.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <ObjexxFCL/format.hh>
#include <numeric/constants.hh>
#include <numeric/conversions.hh>
#include <basic/Tracer.hh>
#include <core/conformation/symmetry/SymmetricConformation.hh>
#include <core/optimization/MinimizerMap.hh>
#include <utility/vector1.hh>
#include <core/kinematics/AtomTree.hh>
#include <core/kinematics/FoldTree.hh>

Classes
class	core::optimization::symmetry::MinDebug

Namespaces
	core
	A class for reading in the atom type properties.
	core::optimization
	core::optimization::symmetry

Typedefs
typedef id::DOF_ID	core::optimization::symmetry::DOF_ID

Functions
static THREAD_LOCAL basic::Tracer	core::optimization::symmetry::TR ("core.optimization.symmetry.sym_atom_tree_minimize")
void	core::optimization::symmetry::atom_tree_dfunc (pose::Pose &pose, SymMinimizerMap &symm_min_map, scoring::ScoreFunction const &scorefxn, Multivec const &vars, Multivec &dE_dvars)
void	core::optimization::symmetry::atom_tree_get_atompairE_deriv (pose::Pose &pose, SymMinimizerMap &symm_min_map, scoring::ScoreFunction const &scorefxn)
void	core::optimization::symmetry::numerical_derivative_check (SymMinimizerMap const &min_map, Multifunc const &func, Multivec const &start_vars, Multivec const &dE_dvars, bool const verbose)